RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 MIA2Q96PC5 1412 aa8.79□□□□□ -1
AP4E1-203ENST00000560508 PTMAP06454 111 aaKnown RBP8.79□□□□□ -1
AP4E1-203ENST00000560508 ITPRIPQ8IWB1 547 aa8.79□□□□□ -1
AP4E1-203ENST00000560508 ST20-MTHFSA0A0A6YYL1 179 aa8.78□□□□□ -1
AP4E1-203ENST00000560508 PTMSP20962 102 aa8.78□□□□□ -1
AP4E1-203ENST00000560508 LMOD3Q0VAK6 560 aa8.78□□□□□ -1
AP4E1-203ENST00000560508 IQGAP2Q13576 1575 aa8.78□□□□□ -1
AP4E1-203ENST00000560508 CNTLNQ9NXG0 1405 aa8.78□□□□□ -1
AP4E1-203ENST00000560508 PANK3Q9H999 370 aa8.78□□□□□ -1
AP4E1-203ENST00000560508 SNAPC4Q5SXM2 1469 aa8.78□□□□□ -1
AP4E1-203ENST00000560508 KCNJ4P48050 445 aa8.78□□□□□ -1
AP4E1-203ENST00000560508 CCDC146Q8IYE0 955 aa8.78□□□□□ -1
AP4E1-203ENST00000560508 PAK3O75914 559 aaPredicted RBP8.77□□□□□ -1.01
AP4E1-203ENST00000560508 EVC2Q86UK5 1308 aa8.77□□□□□ -1.01
AP4E1-203ENST00000560508 CHMP4AQ9BY43 222 aa8.77□□□□□ -1.01
AP4E1-203ENST00000560508 ZBED9Q6R2W3 1325 aa8.77□□□□□ -1.01
AP4E1-203ENST00000560508 CENPJQ9HC77 1338 aaPredicted RBP8.77□□□□□ -1.01
AP4E1-203ENST00000560508 CDK11BP21127 795 aaKnown RBP8.77□□□□□ -1.01
AP4E1-203ENST00000560508 PLEKHH2Q8IVE3 1493 aa8.76□□□□□ -1.01
AP4E1-203ENST00000560508 PTPN23Q9H3S7 1636 aa8.76□□□□□ -1.01
AP4E1-203ENST00000560508 CTTNBP2Q8WZ74 1663 aa8.76□□□□□ -1.01
AP4E1-203ENST00000560508 ANKRD50Q9ULJ7 1429 aa8.76□□□□□ -1.01
AP4E1-203ENST00000560508 SMC4Q9NTJ3 1288 aa8.76□□□□□ -1.01
AP4E1-203ENST00000560508 L1TD1Q5T7N2 865 aaKnown RBP8.76□□□□□ -1.01
AP4E1-203ENST00000560508 TRAK1Q9UPV9 953 aa8.76□□□□□ -1.01
AP4E1-203ENST00000560508 CGNL1Q0VF96 1302 aa8.76□□□□□ -1.01
AP4E1-203ENST00000560508 ABCA10Q8WWZ4 1543 aa8.76□□□□□ -1.01
AP4E1-203ENST00000560508 VGFO15240 615 aaPredicted RBP8.76□□□□□ -1.01
AP4E1-203ENST00000560508 NUTM2DQ5VT03 806 aaPredicted RBP8.76□□□□□ -1.01
AP4E1-203ENST00000560508 PRKRIP1Q9H875 184 aaPredicted RBP8.75□□□□□ -1.01
AP4E1-203ENST00000560508 FGD1P98174 961 aa8.75□□□□□ -1.01
AP4E1-203ENST00000560508 CCDC7Q96M83 1385 aa8.75□□□□□ -1.01
AP4E1-203ENST00000560508 GOLGA6L6A8MZA4 724 aa8.75□□□□□ -1.01
AP4E1-203ENST00000560508 KIF14Q15058 1648 aa8.74□□□□□ -1.01
AP4E1-203ENST00000560508 NPHP1O15259 732 aa8.74□□□□□ -1.01
AP4E1-203ENST00000560508 STAC3Q96MF2 364 aa8.74□□□□□ -1.01
AP4E1-203ENST00000560508 TPRNQ4KMQ1 711 aa8.74□□□□□ -1.01
AP4E1-203ENST00000560508 PRG4Q92954 1404 aaPredicted RBP8.73□□□□□ -1.01
AP4E1-203ENST00000560508 STK31Q9BXU1 1019 aa8.73□□□□□ -1.01
AP4E1-203ENST00000560508 OSCARQ8IYS5 282 aa8.73□□□□□ -1.01
AP4E1-203ENST00000560508 MAP3K1Q13233 1512 aa8.73□□□□□ -1.01
AP4E1-203ENST00000560508 ZNF644Q9H582 1327 aaPredicted RBP8.73□□□□□ -1.01
AP4E1-203ENST00000560508 C9orf84Q5VXU9 1444 aa8.72□□□□□ -1.01
AP4E1-203ENST00000560508 E9PSI1 815 aa8.72□□□□□ -1.01
AP4E1-203ENST00000560508 DAPK1P53355 1430 aa8.72□□□□□ -1.01
AP4E1-203ENST00000560508 DNTTIP2Q5QJE6 756 aaKnown RBP8.72□□□□□ -1.01
AP4E1-203ENST00000560508 KIAA1211Q6ZU35 1233 aa8.72□□□□□ -1.01
AP4E1-203ENST00000560508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.72□□□□□ -1.01
AP4E1-203ENST00000560508 GPATCH3Q96I76 525 aa8.72□□□□□ -1.01
AP4E1-203ENST00000560508 TSHZ2Q9NRE2 1034 aa8.72□□□□□ -1.01
AP4E1-203ENST00000560508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.72□□□□□ -1.01
AP4E1-203ENST00000560508 NAP1L2Q9ULW6 460 aaPredicted RBP8.72□□□□□ -1.01
AP4E1-203ENST00000560508 NGDNQ8NEJ9 315 aaKnown RBP8.71□□□□□ -1.01
AP4E1-203ENST00000560508 RRP1P56182 461 aaKnown RBP8.71□□□□□ -1.01
AP4E1-203ENST00000560508 HMMRO75330 724 aa8.71□□□□□ -1.02
AP4E1-203ENST00000560508 CENPQQ7L2Z9 268 aaPredicted RBP8.71□□□□□ -1.02
AP4E1-203ENST00000560508 HFM1A2PYH4 1435 aa8.71□□□□□ -1.02
AP4E1-203ENST00000560508 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.02
AP4E1-203ENST00000560508 GBP4Q96PP9 640 aa8.71□□□□□ -1.02
AP4E1-203ENST00000560508 CSB-PGBD3P0DP91 1061 aa8.71□□□□□ -1.02
AP4E1-203ENST00000560508 SPRYD3Q8NCJ5 442 aa8.71□□□□□ -1.02
AP4E1-203ENST00000560508 HDAC5Q9UQL6 1122 aa8.7□□□□□ -1.02
AP4E1-203ENST00000560508 KIAA1107Q9UPP5 1409 aa8.7□□□□□ -1.02
AP4E1-203ENST00000560508 AMPHP49418 695 aa8.7□□□□□ -1.02
AP4E1-203ENST00000560508 EPRSP07814 1512 aaKnown RBP8.7□□□□□ -1.02
AP4E1-203ENST00000560508 IPO9Q96P70 1041 aaKnown RBP8.7□□□□□ -1.02
AP4E1-203ENST00000560508 COG3Q96JB2 828 aa8.7□□□□□ -1.02
AP4E1-203ENST00000560508 KIF7Q2M1P5 1343 aa8.7□□□□□ -1.02
AP4E1-203ENST00000560508 CDK13Q14004 1512 aaKnown RBP8.69□□□□□ -1.02
AP4E1-203ENST00000560508 GOLGA6L4A6NEF3 574 aa8.69□□□□□ -1.02
AP4E1-203ENST00000560508 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.69□□□□□ -1.02
AP4E1-203ENST00000560508 APBB1O00213 710 aa8.69□□□□□ -1.02
AP4E1-203ENST00000560508 NGEFQ8N5V2 710 aa8.69□□□□□ -1.02
AP4E1-203ENST00000560508 DEKP35659 375 aaKnown RBP8.69□□□□□ -1.02
AP4E1-203ENST00000560508 ITSN2Q9NZM3 1697 aa8.68□□□□□ -1.02
AP4E1-203ENST00000560508 KIAA0586Q9BVV6 1533 aa8.68□□□□□ -1.02
AP4E1-203ENST00000560508 MFAP1P55081 439 aaKnown RBP8.68□□□□□ -1.02
AP4E1-203ENST00000560508 BRD4O60885 1362 aaPredicted RBP8.68□□□□□ -1.02
AP4E1-203ENST00000560508 NAP1L5Q96NT1 182 aaPredicted RBP8.67□□□□□ -1.02
AP4E1-203ENST00000560508 WDR97A6NE52 1622 aa8.67□□□□□ -1.02
AP4E1-203ENST00000560508 SCAPERQ9BY12 1400 aa8.67□□□□□ -1.02
AP4E1-203ENST00000560508 PLCB2Q00722 1185 aa8.67□□□□□ -1.02
AP4E1-203ENST00000560508 RRP7AQ9Y3A4 280 aaKnown RBP8.67□□□□□ -1.02
AP4E1-203ENST00000560508 CAMSAP2Q08AD1 1489 aa8.66□□□□□ -1.02
AP4E1-203ENST00000560508 CRBNQ96SW2 442 aa8.66□□□□□ -1.02
AP4E1-203ENST00000560508 NRDCO43847 1150 aa8.66□□□□□ -1.02
AP4E1-203ENST00000560508 ROCK1Q13464 1354 aa8.66□□□□□ -1.02
AP4E1-203ENST00000560508 THOC2Q8NI27 1593 aaKnown RBP8.66□□□□□ -1.02
AP4E1-203ENST00000560508 MINK1Q8N4C8 1332 aaPredicted RBP8.66□□□□□ -1.02
AP4E1-203ENST00000560508 ZKSCAN2Q63HK3 967 aa8.65□□□□□ -1.02
AP4E1-203ENST00000560508 MSNP26038 577 aaKnown RBP8.65□□□□□ -1.02
AP4E1-203ENST00000560508 KIF21AQ7Z4S6 1674 aa8.65□□□□□ -1.02
AP4E1-203ENST00000560508 RUNDC1Q96C34 613 aa8.65□□□□□ -1.02
AP4E1-203ENST00000560508 TAOK2Q9UL54 1235 aa8.65□□□□□ -1.02
AP4E1-203ENST00000560508 TRIM6-TRIM34B2RNG4 842 aa8.65□□□□□ -1.02
AP4E1-203ENST00000560508 SLC4A10Q6U841 1118 aa8.65□□□□□ -1.02
AP4E1-203ENST00000560508 CLUAP1Q96AJ1 413 aa8.65□□□□□ -1.03
AP4E1-203ENST00000560508 MAGI1Q96QZ7 1491 aaPredicted RBP8.65□□□□□ -1.03
AP4E1-203ENST00000560508 WASHC2AQ641Q2 1341 aa8.65□□□□□ -1.03
AP4E1-203ENST00000560508 CFAP43Q8NDM7 1665 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms