RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 DDX12PQ92771 950 aa13.3□□□□□ -0.28
LINC00520-206ENST00000560336 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
LINC00520-206ENST00000560336 PCDHGA10Q9Y5H3 936 aa13.3□□□□□ -0.28
LINC00520-206ENST00000560336 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
LINC00520-206ENST00000560336 PTGER2P43116 358 aa13.29□□□□□ -0.28
LINC00520-206ENST00000560336 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
LINC00520-206ENST00000560336 ZDHHC16Q969W1 377 aa13.29□□□□□ -0.28
LINC00520-206ENST00000560336 PHF14O94880 888 aa13.28□□□□□ -0.28
LINC00520-206ENST00000560336 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
LINC00520-206ENST00000560336 ARHGAP33O14559 1287 aa13.27□□□□□ -0.29
LINC00520-206ENST00000560336 PSEN2P49810 448 aa13.26□□□□□ -0.29
LINC00520-206ENST00000560336 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
LINC00520-206ENST00000560336 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
LINC00520-206ENST00000560336 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
LINC00520-206ENST00000560336 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC00520-206ENST00000560336 KCNK17Q96T54 332 aa13.25□□□□□ -0.29
LINC00520-206ENST00000560336 TYW1BQ6NUM6 668 aa13.24□□□□□ -0.29
LINC00520-206ENST00000560336 ANKRD13DQ6ZTN6 518 aa13.24□□□□□ -0.29
LINC00520-206ENST00000560336 EPAS1Q99814 870 aa13.23□□□□□ -0.29
LINC00520-206ENST00000560336 PLSCR2Q9NRY7 297 aa13.23□□□□□ -0.29
LINC00520-206ENST00000560336 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
LINC00520-206ENST00000560336 GRXCR2A6NFK2 248 aa13.22□□□□□ -0.29
LINC00520-206ENST00000560336 DMRTA1Q5VZB9 504 aa13.22□□□□□ -0.29
LINC00520-206ENST00000560336 SPNS2Q8IVW8 549 aa13.22□□□□□ -0.29
LINC00520-206ENST00000560336 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
LINC00520-206ENST00000560336 NBR1Q14596 966 aa13.21□□□□□ -0.29
LINC00520-206ENST00000560336 PTPREP23469 700 aa13.2□□□□□ -0.3
LINC00520-206ENST00000560336 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
LINC00520-206ENST00000560336 KCNH8Q96L42 1107 aa13.2□□□□□ -0.3
LINC00520-206ENST00000560336 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
LINC00520-206ENST00000560336 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
LINC00520-206ENST00000560336 MLLT3P42568 568 aaPredicted RBP13.15□□□□□ -0.3
LINC00520-206ENST00000560336 PRDM2Q13029 1718 aa13.15□□□□□ -0.3
LINC00520-206ENST00000560336 PRIM1P49642 420 aaKnown RBP13.14□□□□□ -0.31
LINC00520-206ENST00000560336 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
LINC00520-206ENST00000560336 C6orf132Q5T0Z8 1188 aa13.14□□□□□ -0.31
LINC00520-206ENST00000560336 SEMA3EO15041 775 aa13.13□□□□□ -0.31
LINC00520-206ENST00000560336 OSBPP22059 807 aa13.13□□□□□ -0.31
LINC00520-206ENST00000560336 ADGRD1Q6QNK2 874 aa13.13□□□□□ -0.31
LINC00520-206ENST00000560336 MAP3K7O43318 606 aa13.12□□□□□ -0.31
LINC00520-206ENST00000560336 COL9A1P20849 921 aa13.12□□□□□ -0.31
LINC00520-206ENST00000560336 TK2O00142 265 aa13.1□□□□□ -0.31
LINC00520-206ENST00000560336 MMRN1Q13201 1228 aa13.1□□□□□ -0.31
LINC00520-206ENST00000560336 TSR1Q2NL82 804 aaKnown RBP13.1□□□□□ -0.31
LINC00520-206ENST00000560336 PPP1R3GB7ZBB8 358 aa13.09□□□□□ -0.31
LINC00520-206ENST00000560336 ZBED2Q9BTP6 218 aa13.09□□□□□ -0.31
LINC00520-206ENST00000560336 VPS9D1Q9Y2B5 631 aa13.09□□□□□ -0.31
LINC00520-206ENST00000560336 SLC4A5Q9BY07 1137 aa13.06□□□□□ -0.32
LINC00520-206ENST00000560336 HRO43593 1189 aa13.04□□□□□ -0.32
LINC00520-206ENST00000560336 PROX2Q3B8N5 592 aa13.04□□□□□ -0.32
LINC00520-206ENST00000560336 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
LINC00520-206ENST00000560336 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
LINC00520-206ENST00000560336 CDHR5Q9HBB8 845 aa13.02□□□□□ -0.33
LINC00520-206ENST00000560336 ABCC8Q09428 1581 aa12.98□□□□□ -0.33
LINC00520-206ENST00000560336 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
LINC00520-206ENST00000560336 BHMG1C9JSJ3 638 aaPredicted RBP12.97□□□□□ -0.33
LINC00520-206ENST00000560336 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
LINC00520-206ENST00000560336 TRIM6-TRIM34B2RNG4 842 aa12.95□□□□□ -0.34
LINC00520-206ENST00000560336 SMYD5Q6GMV2 418 aa12.95□□□□□ -0.34
LINC00520-206ENST00000560336 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
LINC00520-206ENST00000560336 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
LINC00520-206ENST00000560336 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
LINC00520-206ENST00000560336 NPDC1Q9NQX5 325 aaPredicted RBP12.94□□□□□ -0.34
LINC00520-206ENST00000560336 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
LINC00520-206ENST00000560336 PRSS12P56730 875 aa12.93□□□□□ -0.34
LINC00520-206ENST00000560336 CDCA7LQ96GN5 454 aa12.93□□□□□ -0.34
LINC00520-206ENST00000560336 TSKSQ9UJT2 592 aa12.93□□□□□ -0.34
LINC00520-206ENST00000560336 NUTM2FA1L443 756 aa12.92□□□□□ -0.34
LINC00520-206ENST00000560336 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
LINC00520-206ENST00000560336 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
LINC00520-206ENST00000560336 NBPF3Q9H094 633 aa12.92□□□□□ -0.34
LINC00520-206ENST00000560336 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
LINC00520-206ENST00000560336 FAM198AQ9UFP1 575 aa12.89□□□□□ -0.35
LINC00520-206ENST00000560336 PACS2Q86VP3 889 aa12.88□□□□□ -0.35
LINC00520-206ENST00000560336 CFTRP13569 1480 aa12.87□□□□□ -0.35
LINC00520-206ENST00000560336 PTGDRQ13258 359 aa12.87□□□□□ -0.35
LINC00520-206ENST00000560336 KCTD12Q96CX2 325 aaKnown RBP12.87□□□□□ -0.35
LINC00520-206ENST00000560336 SEPT9Q9UHD8 586 aaPredicted RBP12.87□□□□□ -0.35
LINC00520-206ENST00000560336 GOLGA8CPA6NN73 597 aa12.86□□□□□ -0.35
LINC00520-206ENST00000560336 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
LINC00520-206ENST00000560336 BIVM-ERCC5R4GMW8 1640 aa12.85□□□□□ -0.35
LINC00520-206ENST00000560336 PADI6Q6TGC4 694 aa12.85□□□□□ -0.35
LINC00520-206ENST00000560336 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
LINC00520-206ENST00000560336 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
LINC00520-206ENST00000560336 WRNQ14191 1432 aaPredicted RBP eCLIP12.83□□□□□ -0.36
LINC00520-206ENST00000560336 C3orf80F5H4A9 247 aa12.83□□□□□ -0.36
LINC00520-206ENST00000560336 LAPTM4BQ86VI4 370 aa12.83□□□□□ -0.36
LINC00520-206ENST00000560336 CADPSQ9ULU8 1353 aa12.82□□□□□ -0.36
LINC00520-206ENST00000560336 SMAPO00193 183 aa12.82□□□□□ -0.36
LINC00520-206ENST00000560336 FCHSD2O94868 740 aa12.82□□□□□ -0.36
LINC00520-206ENST00000560336 TTC13Q8NBP0 860 aa12.82□□□□□ -0.36
LINC00520-206ENST00000560336 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
LINC00520-206ENST00000560336 TATDN2Q93075 761 aa12.81□□□□□ -0.36
LINC00520-206ENST00000560336 WNT2BQ93097 391 aa12.81□□□□□ -0.36
LINC00520-206ENST00000560336 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
LINC00520-206ENST00000560336 TULP1O00294 542 aaPredicted RBP12.8□□□□□ -0.36
LINC00520-206ENST00000560336 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
LINC00520-206ENST00000560336 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
LINC00520-206ENST00000560336 FAM98CQ17RN3 349 aaKnown RBP12.79□□□□□ -0.36
LINC00520-206ENST00000560336 NUDT18Q6ZVK8 323 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms