RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 KANK1Q14678 1352 aa14.98□□□□□ -0.01
CSPG4P5-201ENST00000558731 CROCC2H7BZ55 1655 aa14.97□□□□□ -0.01
CSPG4P5-201ENST00000558731 ARHGEF5Q12774 1597 aa14.97□□□□□ -0.01
CSPG4P5-201ENST00000558731 ROCK2O75116 1388 aaKnown RBP14.96□□□□□ -0.01
CSPG4P5-201ENST00000558731 ST20-MTHFSA0A0A6YYL1 179 aa14.96□□□□□ -0.01
CSPG4P5-201ENST00000558731 NBPF1Q3BBV0 1214 aa14.96□□□□□ -0.01
CSPG4P5-201ENST00000558731 NUTM2DQ5VT03 806 aaPredicted RBP14.96□□□□□ -0.01
CSPG4P5-201ENST00000558731 FAM135AQ9P2D6 1515 aa14.96□□□□□ -0.02
CSPG4P5-201ENST00000558731 USP47Q96K76 1375 aa14.95□□□□□ -0.02
CSPG4P5-201ENST00000558731 WASHC2CQ9Y4E1 1318 aa14.94□□□□□ -0.02
CSPG4P5-201ENST00000558731 FAM9BQ8IZU0 186 aa14.93□□□□□ -0.02
CSPG4P5-201ENST00000558731 ABCC1P33527 1531 aa14.92□□□□□ -0.02
CSPG4P5-201ENST00000558731 TEX14Q8IWB6 1497 aa14.92□□□□□ -0.02
CSPG4P5-201ENST00000558731 KIF7Q2M1P5 1343 aa14.91□□□□□ -0.02
CSPG4P5-201ENST00000558731 DUOX2Q9NRD8 1548 aa14.9□□□□□ -0.02
CSPG4P5-201ENST00000558731 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
CSPG4P5-201ENST00000558731 MRS2Q9HD23 443 aa14.88□□□□□ -0.03
CSPG4P5-201ENST00000558731 CCDC7Q96M83 1385 aa14.88□□□□□ -0.03
CSPG4P5-201ENST00000558731 HNRNPUQ00839 825 aaKnown RBP eCLIP14.88□□□□□ -0.03
CSPG4P5-201ENST00000558731 ARID4BQ4LE39 1312 aaPredicted RBP14.87□□□□□ -0.03
CSPG4P5-201ENST00000558731 ERBINQ96RT1 1412 aa14.87□□□□□ -0.03
CSPG4P5-201ENST00000558731 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
CSPG4P5-201ENST00000558731 DHX29Q7Z478 1369 aaKnown RBP14.86□□□□□ -0.03
CSPG4P5-201ENST00000558731 ATP7AQ04656 1500 aa14.86□□□□□ -0.03
CSPG4P5-201ENST00000558731 ESF1Q9H501 851 aaKnown RBP14.84□□□□□ -0.03
CSPG4P5-201ENST00000558731 ZNF518AQ6AHZ1 1483 aa14.83□□□□□ -0.04
CSPG4P5-201ENST00000558731 ZFYVE16Q7Z3T8 1539 aa14.82□□□□□ -0.04
CSPG4P5-201ENST00000558731 CCDC184Q52MB2 194 aa14.81□□□□□ -0.04
CSPG4P5-201ENST00000558731 BCANQ96GW7 911 aa14.81□□□□□ -0.04
CSPG4P5-201ENST00000558731 CFAP65Q6ZU64 1925 aaKnown RBP14.81□□□□□ -0.04
CSPG4P5-201ENST00000558731 ABCA9Q8IUA7 1624 aa14.81□□□□□ -0.04
CSPG4P5-201ENST00000558731 RTEL1-TNFRSF6BF6WH68 1400 aa14.81□□□□□ -0.04
CSPG4P5-201ENST00000558731 PLA2R1Q13018 1463 aa14.81□□□□□ -0.04
CSPG4P5-201ENST00000558731 CFAP70Q5T0N1 1121 aa14.8□□□□□ -0.04
CSPG4P5-201ENST00000558731 A2MP01023 1474 aa14.8□□□□□ -0.04
CSPG4P5-201ENST00000558731 SAFB2Q14151 953 aaKnown RBP eCLIP14.79□□□□□ -0.04
CSPG4P5-201ENST00000558731 CC2D1BQ5T0F9 858 aaKnown RBP14.79□□□□□ -0.04
CSPG4P5-201ENST00000558731 PRKRIP1Q9H875 184 aaPredicted RBP14.78□□□□□ -0.04
CSPG4P5-201ENST00000558731 MAST1Q9Y2H9 1570 aa14.78□□□□□ -0.04
CSPG4P5-201ENST00000558731 CCER2I3L3R5 266 aa14.78□□□□□ -0.04
CSPG4P5-201ENST00000558731 SALL2Q9Y467 1007 aaPredicted RBP14.78□□□□□ -0.04
CSPG4P5-201ENST00000558731 POGZQ7Z3K3 1410 aa14.77□□□□□ -0.04
CSPG4P5-201ENST00000558731 PLXNC1O60486 1568 aa14.77□□□□□ -0.04
CSPG4P5-201ENST00000558731 CNTLNQ9NXG0 1405 aa14.77□□□□□ -0.04
CSPG4P5-201ENST00000558731 TSPOAP1O95153 1857 aa14.77□□□□□ -0.05
CSPG4P5-201ENST00000558731 RIMBP3CA6NJZ7 1639 aa14.77□□□□□ -0.05
CSPG4P5-201ENST00000558731 RIMBP3BA6NNM3 1639 aa14.77□□□□□ -0.05
CSPG4P5-201ENST00000558731 RIMBP3Q9UFD9 1639 aa14.77□□□□□ -0.05
CSPG4P5-201ENST00000558731 TMEM132EQ6IEE7 984 aa14.76□□□□□ -0.05
CSPG4P5-201ENST00000558731 TMC1Q8TDI8 760 aa14.76□□□□□ -0.05
CSPG4P5-201ENST00000558731 TRAK1Q9UPV9 953 aa14.76□□□□□ -0.05
CSPG4P5-201ENST00000558731 YEATS2Q9ULM3 1422 aa14.76□□□□□ -0.05
CSPG4P5-201ENST00000558731 STK26Q9P289 416 aa14.75□□□□□ -0.05
CSPG4P5-201ENST00000558731 KDM5DQ9BY66 1539 aa14.75□□□□□ -0.05
CSPG4P5-201ENST00000558731 TMF1P82094 1093 aa14.75□□□□□ -0.05
CSPG4P5-201ENST00000558731 ADGRF5Q8IZF2 1346 aa14.74□□□□□ -0.05
CSPG4P5-201ENST00000558731 FBXO31Q5XUX0 539 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P5-201ENST00000558731 UGGT1Q9NYU2 1555 aa14.74□□□□□ -0.05
CSPG4P5-201ENST00000558731 PRAG1Q86YV5 1406 aa14.73□□□□□ -0.05
CSPG4P5-201ENST00000558731 ARAP3Q8WWN8 1544 aa14.73□□□□□ -0.05
CSPG4P5-201ENST00000558731 NEFLP07196 543 aa14.72□□□□□ -0.05
CSPG4P5-201ENST00000558731 UNC13BO14795 1591 aa14.71□□□□□ -0.05
CSPG4P5-201ENST00000558731 RALGAPBQ86X10 1494 aa14.71□□□□□ -0.05
CSPG4P5-201ENST00000558731 ATP10AO60312 1499 aa14.71□□□□□ -0.05
CSPG4P5-201ENST00000558731 SPATA31E1Q6ZUB1 1445 aa14.7□□□□□ -0.06
CSPG4P5-201ENST00000558731 PANK3Q9H999 370 aa14.7□□□□□ -0.06
CSPG4P5-201ENST00000558731 IQGAP3Q86VI3 1631 aa14.69□□□□□ -0.06
CSPG4P5-201ENST00000558731 IRX6P78412 446 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P5-201ENST00000558731 IDI1Q13907 227 aa14.68□□□□□ -0.06
CSPG4P5-201ENST00000558731 FKBP8Q14318 412 aa14.67□□□□□ -0.06
CSPG4P5-201ENST00000558731 UHRF1BP1Q6BDS2 1440 aa14.67□□□□□ -0.06
CSPG4P5-201ENST00000558731 NEO1Q92859 1461 aa14.67□□□□□ -0.06
CSPG4P5-201ENST00000558731 INO80Q9ULG1 1556 aaPredicted RBP14.67□□□□□ -0.06
CSPG4P5-201ENST00000558731 KIDINS220Q9ULH0 1771 aa14.66□□□□□ -0.06
CSPG4P5-201ENST00000558731 DISP3Q9P2K9 1392 aa14.66□□□□□ -0.06
CSPG4P5-201ENST00000558731 KNSTRNQ9Y448 316 aa14.65□□□□□ -0.06
CSPG4P5-201ENST00000558731 NOS1P29475 1434 aa14.65□□□□□ -0.06
CSPG4P5-201ENST00000558731 NPATQ14207 1427 aa14.65□□□□□ -0.07
CSPG4P5-201ENST00000558731 TNNT2P45379 298 aaPredicted RBP14.64□□□□□ -0.07
CSPG4P5-201ENST00000558731 MLH3Q9UHC1 1453 aa14.64□□□□□ -0.07
CSPG4P5-201ENST00000558731 HECW2Q9P2P5 1572 aa14.64□□□□□ -0.07
CSPG4P5-201ENST00000558731 E9PCH4 1651 aa14.64□□□□□ -0.07
CSPG4P5-201ENST00000558731 MAGI2Q86UL8 1455 aa14.62□□□□□ -0.07
CSPG4P5-201ENST00000558731 PRDM15P57071 1507 aaPredicted RBP14.62□□□□□ -0.07
CSPG4P5-201ENST00000558731 TESK2Q96S53 571 aa14.62□□□□□ -0.07
CSPG4P5-201ENST00000558731 CFAP74Q9C0B2 1584 aa14.61□□□□□ -0.07
CSPG4P5-201ENST00000558731 VGFO15240 615 aaPredicted RBP14.61□□□□□ -0.07
CSPG4P5-201ENST00000558731 KDM5CP41229 1560 aa14.6□□□□□ -0.07
CSPG4P5-201ENST00000558731 BCORL1Q5H9F3 1711 aa14.6□□□□□ -0.07
CSPG4P5-201ENST00000558731 POGKQ9P215 609 aa14.6□□□□□ -0.07
CSPG4P5-201ENST00000558731 SUPT16HQ9Y5B9 1047 aaKnown RBP14.6□□□□□ -0.07
CSPG4P5-201ENST00000558731 CLTCL1P53675 1640 aa14.6□□□□□ -0.07
CSPG4P5-201ENST00000558731 CDCA8Q53HL2 280 aa14.59□□□□□ -0.07
CSPG4P5-201ENST00000558731 KTN1Q86UP2 1357 aaKnown RBP14.59□□□□□ -0.07
CSPG4P5-201ENST00000558731 ABCA6Q8N139 1617 aa14.59□□□□□ -0.07
CSPG4P5-201ENST00000558731 CEBPAP49715 358 aaPredicted RBP14.58□□□□□ -0.07
CSPG4P5-201ENST00000558731 TRPM2O94759 1503 aa14.58□□□□□ -0.07
CSPG4P5-201ENST00000558731 CEP152O94986 1710 aa14.58□□□□□ -0.08
CSPG4P5-201ENST00000558731 EIF3AQ14152 1382 aaKnown RBP14.58□□□□□ -0.08
CSPG4P5-201ENST00000558731 PTPRTO14522 1441 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms