RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 CARD10Q9BWT7 1032 aa14□□□□□ -0.17
SEMA4B-204ENST00000558065 ISY1Q9ULR0 285 aaKnown RBP14□□□□□ -0.17
SEMA4B-204ENST00000558065 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
SEMA4B-204ENST00000558065 RRBP1Q9P2E9 1410 aaKnown RBP13.98□□□□□ -0.17
SEMA4B-204ENST00000558065 CAPN2P17655 700 aa13.98□□□□□ -0.17
SEMA4B-204ENST00000558065 RALBP1Q15311 655 aa13.98□□□□□ -0.17
SEMA4B-204ENST00000558065 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.98□□□□□ -0.17
SEMA4B-204ENST00000558065 PPP1R9BQ96SB3 815 aa13.97□□□□□ -0.17
SEMA4B-204ENST00000558065 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
SEMA4B-204ENST00000558065 NCOA2Q15596 1464 aa13.96□□□□□ -0.17
SEMA4B-204ENST00000558065 RRP1P56182 461 aaKnown RBP13.96□□□□□ -0.17
SEMA4B-204ENST00000558065 ZNF710Q8N1W2 664 aa13.96□□□□□ -0.17
SEMA4B-204ENST00000558065 TULP2O00295 520 aa13.96□□□□□ -0.18
SEMA4B-204ENST00000558065 MRS2Q9HD23 443 aa13.96□□□□□ -0.18
SEMA4B-204ENST00000558065 MCM4P33991 863 aa13.95□□□□□ -0.18
SEMA4B-204ENST00000558065 SLKQ9H2G2 1235 aaPredicted RBP13.95□□□□□ -0.18
SEMA4B-204ENST00000558065 RAB3GAP2Q9H2M9 1393 aa13.95□□□□□ -0.18
SEMA4B-204ENST00000558065 ZNF500O60304 480 aaPredicted RBP13.95□□□□□ -0.18
SEMA4B-204ENST00000558065 IGSF3O75054 1194 aa13.95□□□□□ -0.18
SEMA4B-204ENST00000558065 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
SEMA4B-204ENST00000558065 EP400NLQ6ZTU2 488 aa13.95□□□□□ -0.18
SEMA4B-204ENST00000558065 GOLGA3Q08378 1498 aa13.94□□□□□ -0.18
SEMA4B-204ENST00000558065 MLECQ14165 292 aa13.94□□□□□ -0.18
SEMA4B-204ENST00000558065 MSNP26038 577 aaKnown RBP13.94□□□□□ -0.18
SEMA4B-204ENST00000558065 GAS2L3Q86XJ1 694 aa13.94□□□□□ -0.18
SEMA4B-204ENST00000558065 EGFL6Q8IUX8 553 aa13.94□□□□□ -0.18
SEMA4B-204ENST00000558065 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
SEMA4B-204ENST00000558065 TRAK2O60296 914 aa13.93□□□□□ -0.18
SEMA4B-204ENST00000558065 PRKRIP1Q9H875 184 aaPredicted RBP13.93□□□□□ -0.18
SEMA4B-204ENST00000558065 TRIM6-TRIM34B2RNG4 842 aa13.93□□□□□ -0.18
SEMA4B-204ENST00000558065 CC2D1BQ5T0F9 858 aaKnown RBP13.93□□□□□ -0.18
SEMA4B-204ENST00000558065 TRIM34Q9BYJ4 488 aa13.93□□□□□ -0.18
SEMA4B-204ENST00000558065 USP19O94966 1318 aa13.93□□□□□ -0.18
SEMA4B-204ENST00000558065 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
SEMA4B-204ENST00000558065 CNTLNQ9NXG0 1405 aa13.92□□□□□ -0.18
SEMA4B-204ENST00000558065 PHF14O94880 888 aa13.92□□□□□ -0.18
SEMA4B-204ENST00000558065 CCDC173Q0VFZ6 552 aa13.92□□□□□ -0.18
SEMA4B-204ENST00000558065 SASS6Q6UVJ0 657 aa13.92□□□□□ -0.18
SEMA4B-204ENST00000558065 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.92□□□□□ -0.18
SEMA4B-204ENST00000558065 CCDC9Q9Y3X0 531 aaKnown RBP13.92□□□□□ -0.18
SEMA4B-204ENST00000558065 POLR3GLQ9BT43 218 aa13.92□□□□□ -0.18
SEMA4B-204ENST00000558065 CCDC88BA6NC98 1476 aa13.91□□□□□ -0.18
SEMA4B-204ENST00000558065 SOGA1O94964 1423 aa13.91□□□□□ -0.18
SEMA4B-204ENST00000558065 LOC102724159A0A0B4J2E5 919 aa13.91□□□□□ -0.18
SEMA4B-204ENST00000558065 PWP2Q15269 919 aaKnown RBP13.91□□□□□ -0.18
SEMA4B-204ENST00000558065 PTMSP20962 102 aa13.9□□□□□ -0.18
SEMA4B-204ENST00000558065 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
SEMA4B-204ENST00000558065 PANK3Q9H999 370 aa13.9□□□□□ -0.18
SEMA4B-204ENST00000558065 MCCP23508 829 aa13.9□□□□□ -0.18
SEMA4B-204ENST00000558065 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
SEMA4B-204ENST00000558065 JARID2Q92833 1246 aaPredicted RBP13.88□□□□□ -0.19
SEMA4B-204ENST00000558065 BECN1Q14457 450 aa13.88□□□□□ -0.19
SEMA4B-204ENST00000558065 NBPF1Q3BBV0 1214 aa13.88□□□□□ -0.19
SEMA4B-204ENST00000558065 SIRT1Q96EB6 747 aa13.88□□□□□ -0.19
SEMA4B-204ENST00000558065 ZNF771Q7L3S4 317 aaPredicted RBP13.87□□□□□ -0.19
SEMA4B-204ENST00000558065 MYOM3Q5VTT5 1437 aa13.87□□□□□ -0.19
SEMA4B-204ENST00000558065 PRDM2Q13029 1718 aa13.87□□□□□ -0.19
SEMA4B-204ENST00000558065 KTN1Q86UP2 1357 aaKnown RBP13.87□□□□□ -0.19
SEMA4B-204ENST00000558065 ERICH3Q5RHP9 1530 aa13.86□□□□□ -0.19
SEMA4B-204ENST00000558065 NOL7Q9UMY1 257 aaKnown RBP13.86□□□□□ -0.19
SEMA4B-204ENST00000558065 KDM2BQ8NHM5 1336 aa13.86□□□□□ -0.19
SEMA4B-204ENST00000558065 IRF6O14896 467 aa13.86□□□□□ -0.19
SEMA4B-204ENST00000558065 TIGD1Q96MW7 591 aa13.85□□□□□ -0.19
SEMA4B-204ENST00000558065 NLRP1Q9C000 1473 aa13.85□□□□□ -0.19
SEMA4B-204ENST00000558065 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
SEMA4B-204ENST00000558065 FHAD1B1AJZ9 1412 aa13.84□□□□□ -0.19
SEMA4B-204ENST00000558065 HS1BP3Q53T59 392 aa13.84□□□□□ -0.19
SEMA4B-204ENST00000558065 MYRIPQ8NFW9 859 aa13.84□□□□□ -0.19
SEMA4B-204ENST00000558065 PLCD4Q9BRC7 762 aa13.84□□□□□ -0.19
SEMA4B-204ENST00000558065 CT47A1Q5JQC4 288 aaPredicted RBP13.83□□□□□ -0.19
SEMA4B-204ENST00000558065 RUSC2Q8N2Y8 1516 aa13.83□□□□□ -0.2
SEMA4B-204ENST00000558065 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
SEMA4B-204ENST00000558065 EFCC1Q9HA90 598 aa13.83□□□□□ -0.2
SEMA4B-204ENST00000558065 TSC1Q92574 1164 aa13.82□□□□□ -0.2
SEMA4B-204ENST00000558065 ZNF592Q92610 1267 aa13.82□□□□□ -0.2
SEMA4B-204ENST00000558065 BANK1Q8NDB2 785 aa13.82□□□□□ -0.2
SEMA4B-204ENST00000558065 GTF2F1P35269 517 aaKnown RBP eCLIP13.81□□□□□ -0.2
SEMA4B-204ENST00000558065 SLFN14P0C7P3 912 aa13.8□□□□□ -0.2
SEMA4B-204ENST00000558065 SH3BP1Q9Y3L3 701 aa13.8□□□□□ -0.2
SEMA4B-204ENST00000558065 CCDC66A2RUB6 948 aa13.8□□□□□ -0.2
SEMA4B-204ENST00000558065 LMOD3Q0VAK6 560 aa13.8□□□□□ -0.2
SEMA4B-204ENST00000558065 FAM50AQ14320 339 aaKnown RBP13.8□□□□□ -0.2
SEMA4B-204ENST00000558065 CEP120Q8N960 986 aa13.8□□□□□ -0.2
SEMA4B-204ENST00000558065 KIF21BO75037 1637 aa13.8□□□□□ -0.2
SEMA4B-204ENST00000558065 KIF3AQ9Y496 699 aa13.79□□□□□ -0.2
SEMA4B-204ENST00000558065 FEZ2Q9UHY8 353 aaPredicted RBP13.79□□□□□ -0.2
SEMA4B-204ENST00000558065 NBPF20Q3BBV1 942 aa13.79□□□□□ -0.2
SEMA4B-204ENST00000558065 TSPYL1Q9H0U9 437 aa13.79□□□□□ -0.2
SEMA4B-204ENST00000558065 CLSTN1O94985 981 aa13.78□□□□□ -0.2
SEMA4B-204ENST00000558065 KDM5BQ9UGL1 1544 aa13.78□□□□□ -0.2
SEMA4B-204ENST00000558065 CCNB3Q8WWL7 1395 aa13.78□□□□□ -0.2
SEMA4B-204ENST00000558065 NASPP49321 788 aaPredicted RBP13.78□□□□□ -0.2
SEMA4B-204ENST00000558065 GABPB1Q06547 395 aaPredicted RBP13.78□□□□□ -0.2
SEMA4B-204ENST00000558065 PPP6R1Q9UPN7 881 aa13.78□□□□□ -0.2
SEMA4B-204ENST00000558065 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.21
SEMA4B-204ENST00000558065 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
SEMA4B-204ENST00000558065 ZKSCAN5Q9Y2L8 839 aa13.77□□□□□ -0.21
SEMA4B-204ENST00000558065 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
SEMA4B-204ENST00000558065 NOP2P46087 812 aaKnown RBP13.76□□□□□ -0.21
SEMA4B-204ENST00000558065 SEMA3FQ13275 785 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms