RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 PRKCSHP14314 528 aaPredicted RBP21.36■■□□□ 1.01
MARK3-209ENST00000555235 TMC1Q8TDI8 760 aa21.36■■□□□ 1.01
MARK3-209ENST00000555235 ABCA8O94911 1581 aa21.36■■□□□ 1.01
MARK3-209ENST00000555235 PLEKHD1A6NEE1 506 aa21.35■■□□□ 1.01
MARK3-209ENST00000555235 LRPPRCP42704 1394 aaKnown RBP21.35■■□□□ 1.01
MARK3-209ENST00000555235 KTN1Q86UP2 1357 aaKnown RBP21.34■■□□□ 1.01
MARK3-209ENST00000555235 PTPRGP23470 1445 aa21.34■■□□□ 1.01
MARK3-209ENST00000555235 ATP10BO94823 1461 aa21.34■■□□□ 1.01
MARK3-209ENST00000555235 RRP1P56182 461 aaKnown RBP21.32■■□□□ 1
MARK3-209ENST00000555235 BRD4O60885 1362 aaPredicted RBP21.31■■□□□ 1
MARK3-209ENST00000555235 ST20-MTHFSA0A0A6YYL1 179 aa21.31■■□□□ 1
MARK3-209ENST00000555235 MS4A1P11836 297 aa21.31■■□□□ 1
MARK3-209ENST00000555235 TSPY4P0CV99 314 aa21.3■■□□□ 1
MARK3-209ENST00000555235 TSPY10P0CW01 314 aa21.3■■□□□ 1
MARK3-209ENST00000555235 OSCARQ8IYS5 282 aa21.29■■□□□ 1
MARK3-209ENST00000555235 ARHGEF5Q12774 1597 aa21.29■■□□□ 1
MARK3-209ENST00000555235 RALBP1Q15311 655 aa21.29■■□□□ 1
MARK3-209ENST00000555235 CHD1O14646 1710 aa21.28■■□□□ 1
MARK3-209ENST00000555235 E9PCH4 1651 aa21.28■■□□□ 1
MARK3-209ENST00000555235 MYBBP1AQ9BQG0 1328 aaKnown RBP21.28■■□□□ 1
MARK3-209ENST00000555235 PDE4AP27815 886 aa21.27■■□□□ 1
MARK3-209ENST00000555235 KDM2AQ9Y2K7 1162 aa21.27■■□□□ 1
MARK3-209ENST00000555235 PPM1GO15355 546 aaPredicted RBP21.27■■□□□ 1
MARK3-209ENST00000555235 NPM2Q86SE8 214 aaKnown RBP21.26■□□□□ 0.99
MARK3-209ENST00000555235 DCAF11Q8TEB1 546 aa21.26■□□□□ 0.99
MARK3-209ENST00000555235 NEFMP07197 916 aa21.26■□□□□ 0.99
MARK3-209ENST00000555235 BACH2Q9BYV9 841 aa21.25■□□□□ 0.99
MARK3-209ENST00000555235 RCAN3Q9UKA8 241 aa21.25■□□□□ 0.99
MARK3-209ENST00000555235 HNRNPMP52272 730 aaKnown RBP eCLIP21.24■□□□□ 0.992e-7■■■■■ 29.2
MARK3-209ENST00000555235 EXOC6Q8TAG9 804 aa21.24■□□□□ 0.99
MARK3-209ENST00000555235 PDE3BQ13370 1112 aa21.24■□□□□ 0.99
MARK3-209ENST00000555235 ANO8Q9HCE9 1232 aaPredicted RBP21.23■□□□□ 0.99
MARK3-209ENST00000555235 SENP3-EIF4A1A0A087X0R7 540 aa21.22■□□□□ 0.99
MARK3-209ENST00000555235 IL27Q8NEV9 243 aa21.21■□□□□ 0.99
MARK3-209ENST00000555235 FAM135AQ9P2D6 1515 aa21.21■□□□□ 0.99
MARK3-209ENST00000555235 WASHC2CQ9Y4E1 1318 aa21.2■□□□□ 0.99
MARK3-209ENST00000555235 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
MARK3-209ENST00000555235 CCDC141Q6ZP82 1450 aa21.19■□□□□ 0.98
MARK3-209ENST00000555235 PRAG1Q86YV5 1406 aa21.19■□□□□ 0.98
MARK3-209ENST00000555235 DDRGK1Q96HY6 314 aa21.18■□□□□ 0.98
MARK3-209ENST00000555235 TRPM1Q7Z4N2 1603 aa21.18■□□□□ 0.98
MARK3-209ENST00000555235 PARD3Q8TEW0 1356 aa21.18■□□□□ 0.98
MARK3-209ENST00000555235 SAMD9LQ8IVG5 1584 aa21.17■□□□□ 0.98
MARK3-209ENST00000555235 SALL2Q9Y467 1007 aaPredicted RBP21.16■□□□□ 0.98
MARK3-209ENST00000555235 NLRP13Q86W25 1043 aa21.16■□□□□ 0.98
MARK3-209ENST00000555235 RSPH4AQ5TD94 716 aa21.15■□□□□ 0.98
MARK3-209ENST00000555235 GPRASP1Q5JY77 1395 aa21.14■□□□□ 0.97
MARK3-209ENST00000555235 CDC42BPBQ9Y5S2 1711 aa21.14■□□□□ 0.97
MARK3-209ENST00000555235 PREX2Q70Z35 1606 aa21.14■□□□□ 0.97
MARK3-209ENST00000555235 CCDC144AA2RUR9 1427 aa21.13■□□□□ 0.97
MARK3-209ENST00000555235 PER1O15534 1290 aaPredicted RBP21.12■□□□□ 0.97
MARK3-209ENST00000555235 PLA2R1Q13018 1463 aa21.12■□□□□ 0.97
MARK3-209ENST00000555235 INSRP06213 1382 aa21.1■□□□□ 0.97
MARK3-209ENST00000555235 LAMC1P11047 1609 aa21.1■□□□□ 0.97
MARK3-209ENST00000555235 UNC13BO14795 1591 aa21.1■□□□□ 0.97
MARK3-209ENST00000555235 NBPF1Q3BBV0 1214 aa21.1■□□□□ 0.97
MARK3-209ENST00000555235 ZMYM4Q5VZL5 1548 aa21.1■□□□□ 0.97
MARK3-209ENST00000555235 MAST1Q9Y2H9 1570 aa21.09■□□□□ 0.97
MARK3-209ENST00000555235 A2MP01023 1474 aa21.09■□□□□ 0.97
MARK3-209ENST00000555235 COL17A1Q9UMD9 1497 aaPredicted RBP21.09■□□□□ 0.97
MARK3-209ENST00000555235 RTN4Q9NQC3 1192 aaKnown RBP21.07■□□□□ 0.96
MARK3-209ENST00000555235 PRDM15P57071 1507 aaPredicted RBP21.07■□□□□ 0.96
MARK3-209ENST00000555235 CLASP1Q7Z460 1538 aa21.07■□□□□ 0.96
MARK3-209ENST00000555235 RGL3Q3MIN7 710 aa21.06■□□□□ 0.96
MARK3-209ENST00000555235 TESK2Q96S53 571 aa21.06■□□□□ 0.96
MARK3-209ENST00000555235 SYCP2Q9BX26 1530 aa21.05■□□□□ 0.96
MARK3-209ENST00000555235 GSE1Q14687 1217 aa21.04■□□□□ 0.96
MARK3-209ENST00000555235 PLEKHH2Q8IVE3 1493 aa21.04■□□□□ 0.96
MARK3-209ENST00000555235 DISP3Q9P2K9 1392 aa21.04■□□□□ 0.96
MARK3-209ENST00000555235 IQGAP3Q86VI3 1631 aa21.02■□□□□ 0.96
MARK3-209ENST00000555235 BLMP54132 1417 aaPredicted RBP21.02■□□□□ 0.96
MARK3-209ENST00000555235 ERBINQ96RT1 1412 aa21.01■□□□□ 0.95
MARK3-209ENST00000555235 EIF2AK4Q9P2K8 1649 aaKnown RBP21.01■□□□□ 0.95
MARK3-209ENST00000555235 PLXNC1O60486 1568 aa21.01■□□□□ 0.95
MARK3-209ENST00000555235 TTC37Q6PGP7 1564 aa21■□□□□ 0.95
MARK3-209ENST00000555235 ATP10AO60312 1499 aa21■□□□□ 0.95
MARK3-209ENST00000555235 CDCA7LQ96GN5 454 aa20.99■□□□□ 0.95
MARK3-209ENST00000555235 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
MARK3-209ENST00000555235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.953e-8■■■□□ 14.9
MARK3-209ENST00000555235 MYO5CQ9NQX4 1742 aa20.99■□□□□ 0.95
MARK3-209ENST00000555235 NFKBIBQ15653 356 aa20.98■□□□□ 0.95
MARK3-209ENST00000555235 CRBNQ96SW2 442 aa20.98■□□□□ 0.95
MARK3-209ENST00000555235 PANK3Q9H999 370 aa20.98■□□□□ 0.95
MARK3-209ENST00000555235 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.98■□□□□ 0.95
MARK3-209ENST00000555235 CC2D1BQ5T0F9 858 aaKnown RBP20.98■□□□□ 0.95
MARK3-209ENST00000555235 DAXXQ9UER7 740 aaPredicted RBP20.98■□□□□ 0.95
MARK3-209ENST00000555235 MAGI2Q86UL8 1455 aa20.96■□□□□ 0.95
MARK3-209ENST00000555235 PLIN1O60240 522 aa20.95■□□□□ 0.95
MARK3-209ENST00000555235 TMF1P82094 1093 aa20.95■□□□□ 0.95
MARK3-209ENST00000555235 DUOX2Q9NRD8 1548 aa20.94■□□□□ 0.94
MARK3-209ENST00000555235 KDM2BQ8NHM5 1336 aa20.94■□□□□ 0.94
MARK3-209ENST00000555235 CENPQQ7L2Z9 268 aaPredicted RBP20.93■□□□□ 0.94
MARK3-209ENST00000555235 SHROOM2Q13796 1616 aa20.93■□□□□ 0.94
MARK3-209ENST00000555235 RNF17Q9BXT8 1623 aaKnown RBP20.93■□□□□ 0.94
MARK3-209ENST00000555235 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
MARK3-209ENST00000555235 BRPF3Q9ULD4 1205 aa20.92■□□□□ 0.94
MARK3-209ENST00000555235 FAM161AQ3B820 660 aa20.9■□□□□ 0.94
MARK3-209ENST00000555235 FRAT1Q92837 279 aaPredicted RBP20.88■□□□□ 0.93
MARK3-209ENST00000555235 SKAP1Q86WV1 359 aa20.87■□□□□ 0.93
MARK3-209ENST00000555235 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms