RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 NBPF1Q3BBV0 1214 aa4.99□□□□□ -1.61
KTN1-217ENST00000554831 BACH2Q9BYV9 841 aa4.99□□□□□ -1.61
KTN1-217ENST00000554831 SUPT6HQ7KZ85 1726 aaKnown RBP4.99□□□□□ -1.61
KTN1-217ENST00000554831 PAK3O75914 559 aaPredicted RBP4.99□□□□□ -1.61
KTN1-217ENST00000554831 PRG4Q92954 1404 aaPredicted RBP4.99□□□□□ -1.61
KTN1-217ENST00000554831 RWDD1Q9H446 243 aaPredicted RBP4.99□□□□□ -1.61
KTN1-217ENST00000554831 ABCC5O15440 1437 aa4.98□□□□□ -1.61
KTN1-217ENST00000554831 EIF3AQ14152 1382 aaKnown RBP4.98□□□□□ -1.61
KTN1-217ENST00000554831 PNNQ9H307 717 aaKnown RBP4.98□□□□□ -1.61
KTN1-217ENST00000554831 MYH16Q9H6N6 1097 aa4.98□□□□□ -1.61
KTN1-217ENST00000554831 ADAMTS8Q9UP79 889 aa4.98□□□□□ -1.61
KTN1-217ENST00000554831 U2AF1L5P0DN76 240 aaPredicted RBP4.98□□□□□ -1.61
KTN1-217ENST00000554831 U2AF1Q01081 240 aaKnown RBP eCLIP4.98□□□□□ -1.61
KTN1-217ENST00000554831 ESF1Q9H501 851 aaKnown RBP4.98□□□□□ -1.61
KTN1-217ENST00000554831 CENPJQ9HC77 1338 aaPredicted RBP4.98□□□□□ -1.61
KTN1-217ENST00000554831 U2SURPO15042 1029 aaKnown RBP4.98□□□□□ -1.61
KTN1-217ENST00000554831 AMER1Q5JTC6 1135 aaPredicted RBP4.98□□□□□ -1.61
KTN1-217ENST00000554831 PMFBP1Q8TBY8 1022 aa4.98□□□□□ -1.61
KTN1-217ENST00000554831 PTPN23Q9H3S7 1636 aa4.98□□□□□ -1.61
KTN1-217ENST00000554831 GOLGA6L22H0YM25 854 aa4.98□□□□□ -1.61
KTN1-217ENST00000554831 CUL7Q14999 1698 aa4.98□□□□□ -1.61
KTN1-217ENST00000554831 IPO8O15397 1037 aaKnown RBP4.97□□□□□ -1.61
KTN1-217ENST00000554831 GGT6Q6P531 493 aa4.97□□□□□ -1.61
KTN1-217ENST00000554831 CC2D2AQ9P2K1 1620 aa4.97□□□□□ -1.61
KTN1-217ENST00000554831 AAMPQ13685 434 aa4.97□□□□□ -1.61
KTN1-217ENST00000554831 RTN4Q9NQC3 1192 aaKnown RBP4.97□□□□□ -1.61
KTN1-217ENST00000554831 HAP1P54257 671 aaPredicted RBP4.97□□□□□ -1.61
KTN1-217ENST00000554831 POGKQ9P215 609 aa4.97□□□□□ -1.61
KTN1-217ENST00000554831 C9orf84Q5VXU9 1444 aa4.97□□□□□ -1.61
KTN1-217ENST00000554831 ARXQ96QS3 562 aa4.96□□□□□ -1.61
KTN1-217ENST00000554831 GSE1Q14687 1217 aa4.96□□□□□ -1.62
KTN1-217ENST00000554831 CCDC146Q8IYE0 955 aa4.96□□□□□ -1.62
KTN1-217ENST00000554831 CLUAP1Q96AJ1 413 aa4.96□□□□□ -1.62
KTN1-217ENST00000554831 HECW1Q76N89 1606 aa4.96□□□□□ -1.62
KTN1-217ENST00000554831 SLKQ9H2G2 1235 aaPredicted RBP4.96□□□□□ -1.62
KTN1-217ENST00000554831 L1TD1Q5T7N2 865 aaKnown RBP4.96□□□□□ -1.62
KTN1-217ENST00000554831 TRIM44Q96DX7 344 aaPredicted RBP4.96□□□□□ -1.62
KTN1-217ENST00000554831 LAMC3Q9Y6N6 1575 aa4.96□□□□□ -1.62
KTN1-217ENST00000554831 CDK13Q14004 1512 aaKnown RBP4.96□□□□□ -1.62
KTN1-217ENST00000554831 DNAJC5BQ9UF47 199 aa4.95□□□□□ -1.62
KTN1-217ENST00000554831 SRPK2P78362 688 aaKnown RBP4.95□□□□□ -1.62
KTN1-217ENST00000554831 PDE3AQ14432 1141 aa4.95□□□□□ -1.62
KTN1-217ENST00000554831 COG6Q9Y2V7 657 aa4.95□□□□□ -1.62
KTN1-217ENST00000554831 IQGAP2Q13576 1575 aa4.95□□□□□ -1.62
KTN1-217ENST00000554831 THOC2Q8NI27 1593 aaKnown RBP4.95□□□□□ -1.62
KTN1-217ENST00000554831 GLIPR1L2Q4G1C9 344 aa4.95□□□□□ -1.62
KTN1-217ENST00000554831 SNAPC4Q5SXM2 1469 aa4.95□□□□□ -1.62
KTN1-217ENST00000554831 PPP2R1AP30153 589 aa4.95□□□□□ -1.62
KTN1-217ENST00000554831 TRAK1Q9UPV9 953 aa4.95□□□□□ -1.62
KTN1-217ENST00000554831 URB2Q14146 1524 aaKnown RBP4.95□□□□□ -1.62
KTN1-217ENST00000554831 IFT140Q96RY7 1462 aa4.95□□□□□ -1.62
KTN1-217ENST00000554831 SLC4A3P48751 1232 aa4.94□□□□□ -1.62
KTN1-217ENST00000554831 HSCBQ8IWL3 235 aa4.94□□□□□ -1.62
KTN1-217ENST00000554831 CFAP44Q96MT7 982 aa4.94□□□□□ -1.62
KTN1-217ENST00000554831 SYNJ2O15056 1496 aa4.94□□□□□ -1.62
KTN1-217ENST00000554831 UGGT2Q9NYU1 1516 aa4.94□□□□□ -1.62
KTN1-217ENST00000554831 NFKBIBQ15653 356 aa4.94□□□□□ -1.62
KTN1-217ENST00000554831 AFAP1Q8N556 730 aa4.94□□□□□ -1.62
KTN1-217ENST00000554831 TERF2IPQ9NYB0 399 aa4.94□□□□□ -1.62
KTN1-217ENST00000554831 VGFO15240 615 aaPredicted RBP4.94□□□□□ -1.62
KTN1-217ENST00000554831 SMC4Q9NTJ3 1288 aa4.94□□□□□ -1.62
KTN1-217ENST00000554831 CALD1Q05682 793 aaKnown RBP4.93□□□□□ -1.62
KTN1-217ENST00000554831 RNF123Q5XPI4 1314 aa4.93□□□□□ -1.62
KTN1-217ENST00000554831 CFAP70Q5T0N1 1121 aa4.93□□□□□ -1.62
KTN1-217ENST00000554831 ZKSCAN2Q63HK3 967 aa4.93□□□□□ -1.62
KTN1-217ENST00000554831 TCOF1Q13428 1488 aaKnown RBP4.93□□□□□ -1.62
KTN1-217ENST00000554831 MRC2Q9UBG0 1479 aa4.93□□□□□ -1.62
KTN1-217ENST00000554831 SAFB2Q14151 953 aaKnown RBP eCLIP4.93□□□□□ -1.62
KTN1-217ENST00000554831 HDGFL2Q7Z4V5 671 aaPredicted RBP4.93□□□□□ -1.62
KTN1-217ENST00000554831 TCP11L2Q8N4U5 519 aa4.92□□□□□ -1.62
KTN1-217ENST00000554831 RUNDC1Q96C34 613 aa4.92□□□□□ -1.62
KTN1-217ENST00000554831 BCL2L13Q9BXK5 485 aa4.92□□□□□ -1.62
KTN1-217ENST00000554831 GPATCH8Q9UKJ3 1502 aaKnown RBP4.92□□□□□ -1.62
KTN1-217ENST00000554831 PER1O15534 1290 aaPredicted RBP4.92□□□□□ -1.62
KTN1-217ENST00000554831 RRP7AQ9Y3A4 280 aaKnown RBP4.92□□□□□ -1.62
KTN1-217ENST00000554831 PLB1Q6P1J6 1458 aa4.92□□□□□ -1.62
KTN1-217ENST00000554831 HSP90AB1P08238 724 aaKnown RBP4.92□□□□□ -1.62
KTN1-217ENST00000554831 PRDM2Q13029 1718 aa4.92□□□□□ -1.62
KTN1-217ENST00000554831 ITPRIPQ8IWB1 547 aa4.91□□□□□ -1.62
KTN1-217ENST00000554831 STK26Q9P289 416 aa4.91□□□□□ -1.62
KTN1-217ENST00000554831 EVC2Q86UK5 1308 aa4.91□□□□□ -1.62
KTN1-217ENST00000554831 DHX29Q7Z478 1369 aaKnown RBP4.91□□□□□ -1.62
KTN1-217ENST00000554831 PLEKHH2Q8IVE3 1493 aa4.91□□□□□ -1.62
KTN1-217ENST00000554831 GBP4Q96PP9 640 aa4.91□□□□□ -1.62
KTN1-217ENST00000554831 SENP3Q9H4L4 574 aaPredicted RBP4.91□□□□□ -1.62
KTN1-217ENST00000554831 SPATA31E1Q6ZUB1 1445 aa4.91□□□□□ -1.62
KTN1-217ENST00000554831 MTHFSP49914 203 aa4.91□□□□□ -1.62
KTN1-217ENST00000554831 SLFN5Q08AF3 891 aa4.91□□□□□ -1.62
KTN1-217ENST00000554831 DDX19BQ9UMR2 479 aa4.91□□□□□ -1.62
KTN1-217ENST00000554831 DZIP1LQ8IYY4 767 aaKnown RBP4.91□□□□□ -1.62
KTN1-217ENST00000554831 MAGI1Q96QZ7 1491 aaPredicted RBP4.91□□□□□ -1.62
KTN1-217ENST00000554831 CAMSAP2Q08AD1 1489 aa4.9□□□□□ -1.62
KTN1-217ENST00000554831 DUSP27Q5VZP5 1158 aa4.9□□□□□ -1.62
KTN1-217ENST00000554831 CASC1Q6TDU7 716 aa4.9□□□□□ -1.62
KTN1-217ENST00000554831 TESK2Q96S53 571 aa4.9□□□□□ -1.62
KTN1-217ENST00000554831 ERBINQ96RT1 1412 aa4.9□□□□□ -1.62
KTN1-217ENST00000554831 GRIN2AQ12879 1464 aa4.9□□□□□ -1.62
KTN1-217ENST00000554831 CFAP43Q8NDM7 1665 aa4.9□□□□□ -1.63
KTN1-217ENST00000554831 MFAP1P55081 439 aaKnown RBP4.9□□□□□ -1.63
KTN1-217ENST00000554831 PANK1Q8TE04 598 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms