RNA–Protein interactions for RNA: ENST00000554732.5

LINC00639-202, long intergenic non-protein coding RNA 639, humanhuman

TSL 1 (best)

Gene LINC00639, Length 4,364 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-202ENST00000554732 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
LINC00639-202ENST00000554732 APBB1O00213 710 aa17.22■□□□□ 0.35
LINC00639-202ENST00000554732 PKD2Q13563 968 aa17.22■□□□□ 0.35
LINC00639-202ENST00000554732 HMGXB3Q12766 1538 aa17.22■□□□□ 0.35
LINC00639-202ENST00000554732 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
LINC00639-202ENST00000554732 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
LINC00639-202ENST00000554732 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.35
LINC00639-202ENST00000554732 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.35
LINC00639-202ENST00000554732 TMF1P82094 1093 aa17.21■□□□□ 0.35
LINC00639-202ENST00000554732 FOXD4L6Q3SYB3 417 aaPredicted RBP17.21■□□□□ 0.34
LINC00639-202ENST00000554732 FOXD4L3Q6VB84 417 aaPredicted RBP17.21■□□□□ 0.34
LINC00639-202ENST00000554732 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
LINC00639-202ENST00000554732 PRDM10Q9NQV6 1147 aa17.2■□□□□ 0.34
LINC00639-202ENST00000554732 NASPP49321 788 aaPredicted RBP17.19■□□□□ 0.34
LINC00639-202ENST00000554732 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
LINC00639-202ENST00000554732 CFAP53Q96M91 514 aa17.19■□□□□ 0.34
LINC00639-202ENST00000554732 SKOR2Q2VWA4 1001 aaPredicted RBP17.18■□□□□ 0.34
LINC00639-202ENST00000554732 CENPJQ9HC77 1338 aaPredicted RBP17.17■□□□□ 0.34
LINC00639-202ENST00000554732 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
LINC00639-202ENST00000554732 MAP7D2Q96T17 732 aa17.17■□□□□ 0.34
LINC00639-202ENST00000554732 GRPEL1Q9HAV7 217 aa17.17■□□□□ 0.34
LINC00639-202ENST00000554732 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC00639-202ENST00000554732 KIF15Q9NS87 1388 aa17.16■□□□□ 0.34
LINC00639-202ENST00000554732 CDCA8Q53HL2 280 aa17.16■□□□□ 0.34
LINC00639-202ENST00000554732 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
LINC00639-202ENST00000554732 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
LINC00639-202ENST00000554732 PLEKHG5O94827 1062 aa17.15■□□□□ 0.34
LINC00639-202ENST00000554732 ZHX1Q9UKY1 873 aaPredicted RBP17.14■□□□□ 0.34
LINC00639-202ENST00000554732 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
LINC00639-202ENST00000554732 MPNDQ8N594 471 aa17.13■□□□□ 0.33
LINC00639-202ENST00000554732 RNF214Q8ND24 703 aa17.12■□□□□ 0.33
LINC00639-202ENST00000554732 C22orf23Q9BZE7 217 aa17.12■□□□□ 0.33
LINC00639-202ENST00000554732 RRP7AQ9Y3A4 280 aaKnown RBP17.12■□□□□ 0.33
LINC00639-202ENST00000554732 SMG6Q86US8 1419 aaKnown RBP17.12■□□□□ 0.33
LINC00639-202ENST00000554732 KIF21BO75037 1637 aa17.12■□□□□ 0.33
LINC00639-202ENST00000554732 CUX1P39880 1505 aa17.12■□□□□ 0.33
LINC00639-202ENST00000554732 MCM4P33991 863 aa17.12■□□□□ 0.33
LINC00639-202ENST00000554732 ZRSR1Q15695 479 aaKnown RBP17.11■□□□□ 0.33
LINC00639-202ENST00000554732 GOLGA6L4A6NEF3 574 aa17.11■□□□□ 0.33
LINC00639-202ENST00000554732 PNISRQ8TF01 805 aaKnown RBP17.1■□□□□ 0.33
LINC00639-202ENST00000554732 PDCL3Q9H2J4 239 aa17.1■□□□□ 0.33
LINC00639-202ENST00000554732 APAF1O14727 1248 aa17.1■□□□□ 0.33
LINC00639-202ENST00000554732 CSPP1Q1MSJ5 1256 aa17.1■□□□□ 0.33
LINC00639-202ENST00000554732 EFCAB2Q5VUJ9 269 aa17.1■□□□□ 0.33
LINC00639-202ENST00000554732 PANK2Q9BZ23 570 aa17.1■□□□□ 0.33
LINC00639-202ENST00000554732 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC00639-202ENST00000554732 PANK1Q8TE04 598 aa17.1■□□□□ 0.33
LINC00639-202ENST00000554732 WASHC2CQ9Y4E1 1318 aa17.1■□□□□ 0.33
LINC00639-202ENST00000554732 ROCK2O75116 1388 aaKnown RBP17.09■□□□□ 0.33
LINC00639-202ENST00000554732 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
LINC00639-202ENST00000554732 SYAP1Q96A49 352 aaPredicted RBP17.09■□□□□ 0.33
LINC00639-202ENST00000554732 PANK3Q9H999 370 aa17.09■□□□□ 0.33
LINC00639-202ENST00000554732 USP47Q96K76 1375 aa17.09■□□□□ 0.33
LINC00639-202ENST00000554732 CCDC18Q5T9S5 1454 aa17.08■□□□□ 0.33
LINC00639-202ENST00000554732 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.33
LINC00639-202ENST00000554732 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.33
LINC00639-202ENST00000554732 UQCRHP07919 91 aa17.08■□□□□ 0.33
LINC00639-202ENST00000554732 MCTP1Q6DN14 999 aa17.08■□□□□ 0.32
LINC00639-202ENST00000554732 RRAGDQ9NQL2 400 aaPredicted RBP17.08■□□□□ 0.32
LINC00639-202ENST00000554732 SMC4Q9NTJ3 1288 aa17.08■□□□□ 0.32
LINC00639-202ENST00000554732 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
LINC00639-202ENST00000554732 MTERF4Q7Z6M4 381 aaKnown RBP17.06■□□□□ 0.32
LINC00639-202ENST00000554732 TAOK2Q9UL54 1235 aa17.06■□□□□ 0.32
LINC00639-202ENST00000554732 NUP155O75694 1391 aa17.06■□□□□ 0.32
LINC00639-202ENST00000554732 CAVIN1Q6NZI2 390 aaKnown RBP17.05■□□□□ 0.32
LINC00639-202ENST00000554732 ANKRD30AQ9BXX3 1397 aa17.05■□□□□ 0.32
LINC00639-202ENST00000554732 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
LINC00639-202ENST00000554732 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
LINC00639-202ENST00000554732 PHLDB1Q86UU1 1377 aa17.05■□□□□ 0.32
LINC00639-202ENST00000554732 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
LINC00639-202ENST00000554732 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
LINC00639-202ENST00000554732 PTPRGP23470 1445 aa17.04■□□□□ 0.32
LINC00639-202ENST00000554732 XRCC6P12956 609 aaKnown RBP eCLIP17.04■□□□□ 0.32
LINC00639-202ENST00000554732 POLA1P09884 1462 aaPredicted RBP17.04■□□□□ 0.32
LINC00639-202ENST00000554732 MORC1Q86VD1 984 aa17.03■□□□□ 0.32
LINC00639-202ENST00000554732 ERICH3Q5RHP9 1530 aa17.03■□□□□ 0.32
LINC00639-202ENST00000554732 CCDC173Q0VFZ6 552 aa17.03■□□□□ 0.32
LINC00639-202ENST00000554732 ZNF592Q92610 1267 aa17.03■□□□□ 0.32
LINC00639-202ENST00000554732 U2AF1L5P0DN76 240 aaPredicted RBP17.02■□□□□ 0.32
LINC00639-202ENST00000554732 CLCN1P35523 988 aa17.02■□□□□ 0.32
LINC00639-202ENST00000554732 U2AF1Q01081 240 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC00639-202ENST00000554732 GGT6Q6P531 493 aa17.01■□□□□ 0.31
LINC00639-202ENST00000554732 ADAMTS8Q9UP79 889 aa17■□□□□ 0.31
LINC00639-202ENST00000554732 ANKRD45Q5TZF3 282 aa17■□□□□ 0.31
LINC00639-202ENST00000554732 PDE4CQ08493 712 aa16.99■□□□□ 0.31
LINC00639-202ENST00000554732 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
LINC00639-202ENST00000554732 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
LINC00639-202ENST00000554732 GOLGA6L6A8MZA4 724 aa16.99■□□□□ 0.31
LINC00639-202ENST00000554732 NRDCO43847 1150 aa16.99■□□□□ 0.31
LINC00639-202ENST00000554732 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
LINC00639-202ENST00000554732 RRBP1Q9P2E9 1410 aaKnown RBP16.99■□□□□ 0.31
LINC00639-202ENST00000554732 BCAR3O75815 825 aa16.98■□□□□ 0.31
LINC00639-202ENST00000554732 CBX1P83916 185 aa16.98■□□□□ 0.31
LINC00639-202ENST00000554732 IPO8O15397 1037 aaKnown RBP16.98■□□□□ 0.31
LINC00639-202ENST00000554732 XPCQ01831 940 aaPredicted RBP16.98■□□□□ 0.31
LINC00639-202ENST00000554732 CHMP4BQ9H444 224 aaKnown RBP16.98■□□□□ 0.31
LINC00639-202ENST00000554732 E9PSI1 815 aa16.98■□□□□ 0.31
LINC00639-202ENST00000554732 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
LINC00639-202ENST00000554732 KANK1Q14678 1352 aa16.97■□□□□ 0.31
LINC00639-202ENST00000554732 LNPKQ9C0E8 428 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms