RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 PRKRIP1Q9H875 184 aaPredicted RBP21.27■■□□□ 1
PPP4R3A-205ENST00000554684 PANK3Q9H999 370 aa21.27■■□□□ 1
PPP4R3A-205ENST00000554684 NUP153P49790 1475 aaKnown RBP21.27■■□□□ 1
PPP4R3A-205ENST00000554684 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.26■□□□□ 0.99
PPP4R3A-205ENST00000554684 KTN1Q86UP2 1357 aaKnown RBP21.26■□□□□ 0.99
PPP4R3A-205ENST00000554684 TXNDC2Q86VQ3 553 aa21.25■□□□□ 0.99
PPP4R3A-205ENST00000554684 LTV1Q96GA3 475 aaPredicted RBP21.24■□□□□ 0.99
PPP4R3A-205ENST00000554684 NUDCQ9Y266 331 aa21.24■□□□□ 0.99
PPP4R3A-205ENST00000554684 MAPK8IP3Q9UPT6 1336 aa21.24■□□□□ 0.99
PPP4R3A-205ENST00000554684 ABCC5O15440 1437 aa21.24■□□□□ 0.99
PPP4R3A-205ENST00000554684 ASXL2Q76L83 1435 aa21.24■□□□□ 0.99
PPP4R3A-205ENST00000554684 WASHC2AQ641Q2 1341 aa21.23■□□□□ 0.99
PPP4R3A-205ENST00000554684 ADGRL1O94910 1474 aa21.23■□□□□ 0.99
PPP4R3A-205ENST00000554684 B4GALNT3Q6L9W6 998 aa21.21■□□□□ 0.99
PPP4R3A-205ENST00000554684 KIF7Q2M1P5 1343 aa21.21■□□□□ 0.99
PPP4R3A-205ENST00000554684 CAMSAP2Q08AD1 1489 aa21.21■□□□□ 0.99
PPP4R3A-205ENST00000554684 U2AF1L5P0DN76 240 aaPredicted RBP21.21■□□□□ 0.99
PPP4R3A-205ENST00000554684 U2AF1Q01081 240 aaKnown RBP eCLIP21.21■□□□□ 0.99
PPP4R3A-205ENST00000554684 ANP32AP39687 249 aaKnown RBP21.2■□□□□ 0.98
PPP4R3A-205ENST00000554684 RTL5Q5HYW3 569 aaPredicted RBP21.19■□□□□ 0.98
PPP4R3A-205ENST00000554684 RALBP1Q15311 655 aa21.19■□□□□ 0.98
PPP4R3A-205ENST00000554684 RBM33Q96EV2 1170 aaKnown RBP21.19■□□□□ 0.98
PPP4R3A-205ENST00000554684 PTPRKQ15262 1439 aa21.19■□□□□ 0.98
PPP4R3A-205ENST00000554684 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
PPP4R3A-205ENST00000554684 FANCAO15360 1455 aa21.18■□□□□ 0.98
PPP4R3A-205ENST00000554684 PTPN23Q9H3S7 1636 aa21.17■□□□□ 0.98
PPP4R3A-205ENST00000554684 CABP2Q9NPB3 220 aa21.17■□□□□ 0.98
PPP4R3A-205ENST00000554684 NUP160Q12769 1436 aa21.16■□□□□ 0.98
PPP4R3A-205ENST00000554684 CCDC7Q96M83 1385 aa21.16■□□□□ 0.98
PPP4R3A-205ENST00000554684 GPATCH8Q9UKJ3 1502 aaKnown RBP21.16■□□□□ 0.98
PPP4R3A-205ENST00000554684 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
PPP4R3A-205ENST00000554684 CCDC146Q8IYE0 955 aa21.16■□□□□ 0.98
PPP4R3A-205ENST00000554684 TERF2IPQ9NYB0 399 aa21.15■□□□□ 0.98
PPP4R3A-205ENST00000554684 NUTM2GQ5VZR2 741 aa21.15■□□□□ 0.98
PPP4R3A-205ENST00000554684 FRAT1Q92837 279 aaPredicted RBP21.14■□□□□ 0.98
PPP4R3A-205ENST00000554684 EIF3AQ14152 1382 aaKnown RBP21.14■□□□□ 0.97
PPP4R3A-205ENST00000554684 CCDC141Q6ZP82 1450 aa21.14■□□□□ 0.97
PPP4R3A-205ENST00000554684 DISP1Q96F81 1524 aa21.14■□□□□ 0.97
PPP4R3A-205ENST00000554684 KIAA1107Q9UPP5 1409 aa21.14■□□□□ 0.97
PPP4R3A-205ENST00000554684 CSB-PGBD3P0DP91 1061 aa21.13■□□□□ 0.97
PPP4R3A-205ENST00000554684 NLRP13Q86W25 1043 aa21.13■□□□□ 0.97
PPP4R3A-205ENST00000554684 PLEKHH2Q8IVE3 1493 aa21.13■□□□□ 0.97
PPP4R3A-205ENST00000554684 NCOA1Q15788 1441 aa21.12■□□□□ 0.97
PPP4R3A-205ENST00000554684 PPP4R2Q9NY27 417 aa21.12■□□□□ 0.97
PPP4R3A-205ENST00000554684 TARBP1Q13395 1621 aaKnown RBP21.12■□□□□ 0.97
PPP4R3A-205ENST00000554684 ROCK1Q13464 1354 aa21.11■□□□□ 0.97
PPP4R3A-205ENST00000554684 CENPJQ9HC77 1338 aaPredicted RBP21.1■□□□□ 0.97
PPP4R3A-205ENST00000554684 KIF14Q15058 1648 aa21.1■□□□□ 0.97
PPP4R3A-205ENST00000554684 ABCA5Q8WWZ7 1642 aa21.09■□□□□ 0.97
PPP4R3A-205ENST00000554684 RAPGEF6Q8TEU7 1601 aa21.09■□□□□ 0.97
PPP4R3A-205ENST00000554684 IDI1Q13907 227 aa21.09■□□□□ 0.97
PPP4R3A-205ENST00000554684 KIAA0556O60303 1618 aa21.09■□□□□ 0.97
PPP4R3A-205ENST00000554684 PRAM1Q96QH2 718 aa21.08■□□□□ 0.97
PPP4R3A-205ENST00000554684 UGGT2Q9NYU1 1516 aa21.08■□□□□ 0.97
PPP4R3A-205ENST00000554684 AKNAQ7Z591 1439 aa21.08■□□□□ 0.96
PPP4R3A-205ENST00000554684 RRP7AQ9Y3A4 280 aaKnown RBP21.07■□□□□ 0.96
PPP4R3A-205ENST00000554684 EVC2Q86UK5 1308 aa21.07■□□□□ 0.96
PPP4R3A-205ENST00000554684 PMFBP1Q8TBY8 1022 aa21.06■□□□□ 0.96
PPP4R3A-205ENST00000554684 CCDC9Q9Y3X0 531 aaKnown RBP21.06■□□□□ 0.96
PPP4R3A-205ENST00000554684 CTTNBP2Q8WZ74 1663 aa21.05■□□□□ 0.96
PPP4R3A-205ENST00000554684 CEP170Q5SW79 1584 aa21.05■□□□□ 0.96
PPP4R3A-205ENST00000554684 GGNBP2Q9H3C7 697 aa21.05■□□□□ 0.96
PPP4R3A-205ENST00000554684 TRAPPC8Q9Y2L5 1435 aa21.04■□□□□ 0.96
PPP4R3A-205ENST00000554684 AMPHP49418 695 aa21.04■□□□□ 0.96
PPP4R3A-205ENST00000554684 ANKRD30BQ9BXX2 1392 aa21.04■□□□□ 0.96
PPP4R3A-205ENST00000554684 PBRM1Q86U86 1689 aa21.04■□□□□ 0.96
PPP4R3A-205ENST00000554684 SLC52A1Q9NWF4 448 aa21.03■□□□□ 0.96
PPP4R3A-205ENST00000554684 MYBBP1AQ9BQG0 1328 aaKnown RBP21.03■□□□□ 0.96
PPP4R3A-205ENST00000554684 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
PPP4R3A-205ENST00000554684 DENND4BO75064 1496 aaPredicted RBP21.02■□□□□ 0.96
PPP4R3A-205ENST00000554684 SLC12A5Q9H2X9 1139 aa21.02■□□□□ 0.96
PPP4R3A-205ENST00000554684 THEMISQ8N1K5 641 aaPredicted RBP21.02■□□□□ 0.95
PPP4R3A-205ENST00000554684 PLCH2O75038 1416 aa21■□□□□ 0.95
PPP4R3A-205ENST00000554684 C11orf95C9JLR9 678 aaPredicted RBP20.99■□□□□ 0.95
PPP4R3A-205ENST00000554684 PSME1Q06323 249 aa20.99■□□□□ 0.95
PPP4R3A-205ENST00000554684 WDR7Q9Y4E6 1490 aa20.99■□□□□ 0.95
PPP4R3A-205ENST00000554684 CNTLNQ9NXG0 1405 aa20.99■□□□□ 0.95
PPP4R3A-205ENST00000554684 WAPLQ7Z5K2 1190 aa20.98■□□□□ 0.95
PPP4R3A-205ENST00000554684 PROSER2Q86WR7 435 aaPredicted RBP20.98■□□□□ 0.95
PPP4R3A-205ENST00000554684 RCAN3Q9UKA8 241 aa20.97■□□□□ 0.95
PPP4R3A-205ENST00000554684 ERBINQ96RT1 1412 aa20.97■□□□□ 0.95
PPP4R3A-205ENST00000554684 ADGRF5Q8IZF2 1346 aa20.95■□□□□ 0.94
PPP4R3A-205ENST00000554684 ZNF330Q9Y3S2 320 aaPredicted RBP20.95■□□□□ 0.94
PPP4R3A-205ENST00000554684 XPCQ01831 940 aaPredicted RBP20.95■□□□□ 0.94
PPP4R3A-205ENST00000554684 CCDC184Q52MB2 194 aa20.95■□□□□ 0.94
PPP4R3A-205ENST00000554684 MAPKBP1O60336 1514 aa20.94■□□□□ 0.94
PPP4R3A-205ENST00000554684 SYCP2Q9BX26 1530 aa20.94■□□□□ 0.94
PPP4R3A-205ENST00000554684 FTSJ3Q8IY81 847 aaKnown RBP20.94■□□□□ 0.94
PPP4R3A-205ENST00000554684 COG3Q96JB2 828 aa20.94■□□□□ 0.94
PPP4R3A-205ENST00000554684 ESCO1Q5FWF5 840 aa20.93■□□□□ 0.94
PPP4R3A-205ENST00000554684 RTF1Q92541 710 aaKnown RBP20.92■□□□□ 0.94
PPP4R3A-205ENST00000554684 ABCC2Q92887 1545 aa20.92■□□□□ 0.94
PPP4R3A-205ENST00000554684 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
PPP4R3A-205ENST00000554684 ATF3P18847 181 aa20.92■□□□□ 0.94
PPP4R3A-205ENST00000554684 ANKLE2Q86XL3 938 aa20.92■□□□□ 0.94
PPP4R3A-205ENST00000554684 RGS3P49796 1198 aa20.91■□□□□ 0.94
PPP4R3A-205ENST00000554684 CGNL1Q0VF96 1302 aa20.91■□□□□ 0.94
PPP4R3A-205ENST00000554684 DHX29Q7Z478 1369 aaKnown RBP20.91■□□□□ 0.94
PPP4R3A-205ENST00000554684 CABP1Q9NZU7 370 aa20.9■□□□□ 0.94
PPP4R3A-205ENST00000554684 ZBED9Q6R2W3 1325 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms