RNA–Protein interactions for RNA: ENST00000554135.1

PAPOLA-208, Transcript of poly(A) polymerase alpha, humanhuman

TSL 3

Gene PAPOLA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-208ENST00000554135 ZBED2Q9BTP6 218 aa12.91□□□□□ -0.34
PAPOLA-208ENST00000554135 E2F4Q16254 413 aa12.9□□□□□ -0.34
PAPOLA-208ENST00000554135 WDR70Q9NW82 654 aa12.9□□□□□ -0.34
PAPOLA-208ENST00000554135 PPP1R3GB7ZBB8 358 aa12.88□□□□□ -0.35
PAPOLA-208ENST00000554135 PDIA6Q15084 440 aa12.87□□□□□ -0.35
PAPOLA-208ENST00000554135 KCTD12Q96CX2 325 aaKnown RBP12.87□□□□□ -0.35
PAPOLA-208ENST00000554135 EPAS1Q99814 870 aa12.87□□□□□ -0.35
PAPOLA-208ENST00000554135 DDX12PQ92771 950 aa12.86□□□□□ -0.35
PAPOLA-208ENST00000554135 HCSTQ9UBK5 93 aa12.86□□□□□ -0.35
PAPOLA-208ENST00000554135 COL9A1P20849 921 aa12.84□□□□□ -0.35
PAPOLA-208ENST00000554135 SPDYE16A6NNV3 312 aaPredicted RBP12.83□□□□□ -0.36
PAPOLA-208ENST00000554135 BHMG1C9JSJ3 638 aaPredicted RBP12.83□□□□□ -0.36
PAPOLA-208ENST00000554135 RBM33Q96EV2 1170 aaKnown RBP12.82□□□□□ -0.36
PAPOLA-208ENST00000554135 PROX2Q3B8N5 592 aa12.81□□□□□ -0.36
PAPOLA-208ENST00000554135 C6orf132Q5T0Z8 1188 aa12.81□□□□□ -0.36
PAPOLA-208ENST00000554135 MRPL50Q8N5N7 158 aaKnown RBP12.81□□□□□ -0.36
PAPOLA-208ENST00000554135 NBPF3Q9H094 633 aa12.81□□□□□ -0.36
PAPOLA-208ENST00000554135 NBR1Q14596 966 aa12.8□□□□□ -0.36
PAPOLA-208ENST00000554135 ARIH1Q9Y4X5 557 aaPredicted RBP12.79□□□□□ -0.36
PAPOLA-208ENST00000554135 GOLGA8CPA6NN73 597 aa12.78□□□□□ -0.36
PAPOLA-208ENST00000554135 RABGEF1Q9UJ41 708 aa12.77□□□□□ -0.37
PAPOLA-208ENST00000554135 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
PAPOLA-208ENST00000554135 MAP3K7O43318 606 aa12.74□□□□□ -0.37
PAPOLA-208ENST00000554135 WNT2BQ93097 391 aa12.74□□□□□ -0.37
PAPOLA-208ENST00000554135 PTPN5P54829 565 aa12.73□□□□□ -0.37
PAPOLA-208ENST00000554135 GRXCR2A6NFK2 248 aa12.72□□□□□ -0.37
PAPOLA-208ENST00000554135 TSR1Q2NL82 804 aaKnown RBP12.72□□□□□ -0.37
PAPOLA-208ENST00000554135 THSD4Q6ZMP0 1018 aa12.72□□□□□ -0.37
PAPOLA-208ENST00000554135 PLA2G2EQ9NZK7 142 aa12.72□□□□□ -0.37
PAPOLA-208ENST00000554135 KIAA1468Q9P260 1216 aa12.71□□□□□ -0.37
PAPOLA-208ENST00000554135 TRIM6-TRIM34B2RNG4 842 aa12.69□□□□□ -0.38
PAPOLA-208ENST00000554135 ONECUT3O60422 494 aaPredicted RBP12.68□□□□□ -0.38
PAPOLA-208ENST00000554135 PRIM1P49642 420 aaKnown RBP12.68□□□□□ -0.38
PAPOLA-208ENST00000554135 P3H3Q8IVL6 736 aa12.67□□□□□ -0.38
PAPOLA-208ENST00000554135 LAPTM4BQ86VI4 370 aa12.66□□□□□ -0.38
PAPOLA-208ENST00000554135 ANKK1Q8NFD2 765 aa12.66□□□□□ -0.38
PAPOLA-208ENST00000554135 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
PAPOLA-208ENST00000554135 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
PAPOLA-208ENST00000554135 OSBPP22059 807 aa12.63□□□□□ -0.39
PAPOLA-208ENST00000554135 ZFRQ96KR1 1074 aaKnown RBP12.62□□□□□ -0.39
PAPOLA-208ENST00000554135 TSKSQ9UJT2 592 aa12.62□□□□□ -0.39
PAPOLA-208ENST00000554135 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
PAPOLA-208ENST00000554135 BCAMP50895 628 aa12.6□□□□□ -0.39
PAPOLA-208ENST00000554135 CDHR5Q9HBB8 845 aa12.6□□□□□ -0.39
PAPOLA-208ENST00000554135 PRKCSHP14314 528 aaPredicted RBP12.59□□□□□ -0.39
PAPOLA-208ENST00000554135 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
PAPOLA-208ENST00000554135 PACS2Q86VP3 889 aa12.59□□□□□ -0.39
PAPOLA-208ENST00000554135 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
PAPOLA-208ENST00000554135 CDCA7LQ96GN5 454 aa12.59□□□□□ -0.39
PAPOLA-208ENST00000554135 PRSS12P56730 875 aa12.58□□□□□ -0.4
PAPOLA-208ENST00000554135 SOWAHBA6NEL2 793 aa12.56□□□□□ -0.4
PAPOLA-208ENST00000554135 FAM198AQ9UFP1 575 aa12.55□□□□□ -0.4
PAPOLA-208ENST00000554135 MLLT3P42568 568 aaPredicted RBP12.54□□□□□ -0.4
PAPOLA-208ENST00000554135 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
PAPOLA-208ENST00000554135 SMAPO00193 183 aa12.52□□□□□ -0.41
PAPOLA-208ENST00000554135 LRCH3Q96II8 777 aa12.52□□□□□ -0.41
PAPOLA-208ENST00000554135 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
PAPOLA-208ENST00000554135 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.51□□□□□ -0.41
PAPOLA-208ENST00000554135 WBP1LQ9NX94 342 aa12.5□□□□□ -0.41
PAPOLA-208ENST00000554135 RBM27Q9P2N5 1060 aaKnown RBP12.49□□□□□ -0.41
PAPOLA-208ENST00000554135 C3orf80F5H4A9 247 aa12.48□□□□□ -0.41
PAPOLA-208ENST00000554135 TATDN2Q93075 761 aa12.48□□□□□ -0.41
PAPOLA-208ENST00000554135 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
PAPOLA-208ENST00000554135 HPS5Q9UPZ3 1129 aa12.48□□□□□ -0.41
PAPOLA-208ENST00000554135 NYAP1Q6ZVC0 841 aa12.47□□□□□ -0.41
PAPOLA-208ENST00000554135 NPDC1Q9NQX5 325 aaPredicted RBP12.47□□□□□ -0.41
PAPOLA-208ENST00000554135 IFFO2Q5TF58 517 aa12.46□□□□□ -0.41
PAPOLA-208ENST00000554135 PADI6Q6TGC4 694 aa12.46□□□□□ -0.41
PAPOLA-208ENST00000554135 TSR3Q9UJK0 312 aaKnown RBP12.46□□□□□ -0.41
PAPOLA-208ENST00000554135 NUDT18Q6ZVK8 323 aa12.44□□□□□ -0.42
PAPOLA-208ENST00000554135 SAMD7Q7Z3H4 446 aa12.44□□□□□ -0.42
PAPOLA-208ENST00000554135 TTC13Q8NBP0 860 aa12.43□□□□□ -0.42
PAPOLA-208ENST00000554135 SEMA3EO15041 775 aa12.41□□□□□ -0.42
PAPOLA-208ENST00000554135 ITGBL1O95965 494 aaPredicted RBP12.41□□□□□ -0.42
PAPOLA-208ENST00000554135 PPP4CP60510 307 aa12.39□□□□□ -0.43
PAPOLA-208ENST00000554135 A0A0G2JS52 829 aa12.38□□□□□ -0.43
PAPOLA-208ENST00000554135 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
PAPOLA-208ENST00000554135 PTGDRQ13258 359 aa12.37□□□□□ -0.43
PAPOLA-208ENST00000554135 RNF40O75150 1001 aa12.36□□□□□ -0.43
PAPOLA-208ENST00000554135 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.36□□□□□ -0.43
PAPOLA-208ENST00000554135 TESPA1A2RU30 521 aaPredicted RBP12.35□□□□□ -0.43
PAPOLA-208ENST00000554135 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
PAPOLA-208ENST00000554135 KCNC4Q03721 635 aa12.33□□□□□ -0.44
PAPOLA-208ENST00000554135 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
PAPOLA-208ENST00000554135 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
PAPOLA-208ENST00000554135 EYA1Q99502 592 aa12.31□□□□□ -0.44
PAPOLA-208ENST00000554135 TULP1O00294 542 aaPredicted RBP12.28□□□□□ -0.44
PAPOLA-208ENST00000554135 RGS20O76081 388 aa12.28□□□□□ -0.44
PAPOLA-208ENST00000554135 FCHSD2O94868 740 aa12.28□□□□□ -0.44
PAPOLA-208ENST00000554135 SLF2Q8IX21 1173 aa12.27□□□□□ -0.45
PAPOLA-208ENST00000554135 ADGRG1Q9Y653 693 aa12.27□□□□□ -0.45
PAPOLA-208ENST00000554135 APLP1P51693 650 aa12.25□□□□□ -0.45
PAPOLA-208ENST00000554135 RBM26Q5T8P6 1007 aaKnown RBP12.25□□□□□ -0.45
PAPOLA-208ENST00000554135 SMYD5Q6GMV2 418 aa12.25□□□□□ -0.45
PAPOLA-208ENST00000554135 RBM46Q8TBY0 533 aaKnown RBP12.25□□□□□ -0.45
PAPOLA-208ENST00000554135 NECTIN2Q92692 538 aa12.25□□□□□ -0.45
PAPOLA-208ENST00000554135 SLC4A3P48751 1232 aa12.24□□□□□ -0.45
PAPOLA-208ENST00000554135 FAM161AQ3B820 660 aa12.24□□□□□ -0.45
PAPOLA-208ENST00000554135 TJAP1Q5JTD0 557 aa12.24□□□□□ -0.45
PAPOLA-208ENST00000554135 MTRQ99707 1265 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms