RNA–Protein interactions for RNA: ENST00000554135.1

PAPOLA-208, Transcript of poly(A) polymerase alpha, humanhuman

TSL 3

Gene PAPOLA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-208ENST00000554135 AEBP2Q6ZN18 517 aaPredicted RBP30.81■■■□□ 2.52
PAPOLA-208ENST00000554135 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
PAPOLA-208ENST00000554135 SENP3Q9H4L4 574 aaPredicted RBP26.26■■□□□ 1.79
PAPOLA-208ENST00000554135 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
PAPOLA-208ENST00000554135 FOXD1Q16676 465 aa24.44■■□□□ 1.5
PAPOLA-208ENST00000554135 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
PAPOLA-208ENST00000554135 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
PAPOLA-208ENST00000554135 ADRA2BP18089 450 aa23.02■■□□□ 1.28
PAPOLA-208ENST00000554135 PIAS4Q8N2W9 510 aaPredicted RBP22.93■■□□□ 1.26
PAPOLA-208ENST00000554135 MSH5O43196 834 aa22.76■■□□□ 1.23
PAPOLA-208ENST00000554135 POTEDQ86YR6 584 aa21.74■■□□□ 1.07
PAPOLA-208ENST00000554135 SCAF1Q9H7N4 1312 aaKnown RBP21.05■□□□□ 0.96
PAPOLA-208ENST00000554135 MAPK8IP2Q13387 824 aaPredicted RBP21.04■□□□□ 0.96
PAPOLA-208ENST00000554135 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
PAPOLA-208ENST00000554135 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
PAPOLA-208ENST00000554135 CNKSR2Q8WXI2 1034 aa20.38■□□□□ 0.85
PAPOLA-208ENST00000554135 HOXD11P31277 338 aaPredicted RBP20.19■□□□□ 0.82
PAPOLA-208ENST00000554135 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.81
PAPOLA-208ENST00000554135 RNF216Q9NWF9 866 aaPredicted RBP20.12■□□□□ 0.81
PAPOLA-208ENST00000554135 DCAF8L1A6NGE4 600 aa20.03■□□□□ 0.8
PAPOLA-208ENST00000554135 NPM3O75607 178 aaKnown RBP19.84■□□□□ 0.77
PAPOLA-208ENST00000554135 KCNA4P22459 653 aa19.72■□□□□ 0.75
PAPOLA-208ENST00000554135 RNF39Q9H2S5 420 aa19.45■□□□□ 0.7
PAPOLA-208ENST00000554135 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
PAPOLA-208ENST00000554135 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
PAPOLA-208ENST00000554135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.682e-6■□□□□ 8.4
PAPOLA-208ENST00000554135 C1QBPQ07021 282 aaKnown RBP19.17■□□□□ 0.66
PAPOLA-208ENST00000554135 U3KPZ7 1027 aaPredicted RBP18.9■□□□□ 0.62
PAPOLA-208ENST00000554135 SLC4A2P04920 1241 aa18.87■□□□□ 0.61
PAPOLA-208ENST00000554135 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
PAPOLA-208ENST00000554135 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
PAPOLA-208ENST00000554135 CAPN15O75808 1086 aa18.51■□□□□ 0.55
PAPOLA-208ENST00000554135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
PAPOLA-208ENST00000554135 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
PAPOLA-208ENST00000554135 APLP2Q06481 763 aa18.4■□□□□ 0.54
PAPOLA-208ENST00000554135 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
PAPOLA-208ENST00000554135 SAMD1Q6SPF0 538 aaPredicted RBP18.35■□□□□ 0.53
PAPOLA-208ENST00000554135 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
PAPOLA-208ENST00000554135 DSG3P32926 999 aa18.29■□□□□ 0.52
PAPOLA-208ENST00000554135 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
PAPOLA-208ENST00000554135 ZNF219Q9P2Y4 722 aaPredicted RBP18.24■□□□□ 0.51
PAPOLA-208ENST00000554135 ZBTB22O15209 634 aa18.13■□□□□ 0.49
PAPOLA-208ENST00000554135 ABCB7O75027 752 aa18.12■□□□□ 0.49
PAPOLA-208ENST00000554135 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
PAPOLA-208ENST00000554135 POLA2Q14181 598 aa17.83■□□□□ 0.44
PAPOLA-208ENST00000554135 ATXN8OSP0DMR3 200 aa17.7■□□□□ 0.42
PAPOLA-208ENST00000554135 EHMT2Q96KQ7 1210 aa17.54■□□□□ 0.4
PAPOLA-208ENST00000554135 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
PAPOLA-208ENST00000554135 ZBTB12Q9Y330 459 aaPredicted RBP17.51■□□□□ 0.39
PAPOLA-208ENST00000554135 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
PAPOLA-208ENST00000554135 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
PAPOLA-208ENST00000554135 FBLN2P98095 1184 aa17.2■□□□□ 0.34
PAPOLA-208ENST00000554135 AKT1S1Q96B36 256 aa17.12■□□□□ 0.33
PAPOLA-208ENST00000554135 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
PAPOLA-208ENST00000554135 POTEHQ6S545 545 aa17.09■□□□□ 0.33
PAPOLA-208ENST00000554135 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
PAPOLA-208ENST00000554135 SPDYE6P0CI01 402 aa16.98■□□□□ 0.31
PAPOLA-208ENST00000554135 SPDYE2Q495Y8 402 aa16.98■□□□□ 0.31
PAPOLA-208ENST00000554135 CHRDL2Q6WN34 429 aa16.98■□□□□ 0.31
PAPOLA-208ENST00000554135 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.31
PAPOLA-208ENST00000554135 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
PAPOLA-208ENST00000554135 PITPNM1O00562 1244 aa16.8■□□□□ 0.28
PAPOLA-208ENST00000554135 SSUH2Q9Y2M2 353 aa16.78■□□□□ 0.28
PAPOLA-208ENST00000554135 PIP4P2Q8N4L2 257 aa16.64■□□□□ 0.25
PAPOLA-208ENST00000554135 SPDYE1Q8NFV5 336 aaPredicted RBP16.62■□□□□ 0.25
PAPOLA-208ENST00000554135 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
PAPOLA-208ENST00000554135 CLEC11AQ9Y240 323 aa16.59■□□□□ 0.25
PAPOLA-208ENST00000554135 FXR2P51116 673 aaKnown RBP eCLIP16.55■□□□□ 0.24
PAPOLA-208ENST00000554135 SPDYE4A6NLX3 237 aa16.44■□□□□ 0.22
PAPOLA-208ENST00000554135 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
PAPOLA-208ENST00000554135 PRR29P0C7W0 189 aa16.34■□□□□ 0.21
PAPOLA-208ENST00000554135 HAX1O00165 279 aa16.26■□□□□ 0.19
PAPOLA-208ENST00000554135 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
PAPOLA-208ENST00000554135 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
PAPOLA-208ENST00000554135 SP7Q8TDD2 431 aaPredicted RBP16.16■□□□□ 0.18
PAPOLA-208ENST00000554135 EVX2Q03828 476 aa16.06■□□□□ 0.16
PAPOLA-208ENST00000554135 PROM2Q8N271 834 aa16.06■□□□□ 0.16
PAPOLA-208ENST00000554135 C19orf67A6NJJ6 358 aa16.03■□□□□ 0.16
PAPOLA-208ENST00000554135 FARP1Q9Y4F1 1045 aaPredicted RBP16.02■□□□□ 0.16
PAPOLA-208ENST00000554135 CREBZFQ9NS37 354 aa15.99■□□□□ 0.15
PAPOLA-208ENST00000554135 FKBP8Q14318 412 aa15.91■□□□□ 0.14
PAPOLA-208ENST00000554135 CD44P16070 742 aaKnown RBP15.87■□□□□ 0.13
PAPOLA-208ENST00000554135 MNX1P50219 401 aaPredicted RBP15.75■□□□□ 0.11
PAPOLA-208ENST00000554135 GABBR2O75899 941 aa15.72■□□□□ 0.11
PAPOLA-208ENST00000554135 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
PAPOLA-208ENST00000554135 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
PAPOLA-208ENST00000554135 MIER1Q8N108 512 aa15.65■□□□□ 0.1
PAPOLA-208ENST00000554135 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
PAPOLA-208ENST00000554135 PLEKHG5O94827 1062 aa15.62■□□□□ 0.09
PAPOLA-208ENST00000554135 ZNF579Q8NAF0 562 aaKnown RBP15.62■□□□□ 0.09
PAPOLA-208ENST00000554135 PLCD3Q8N3E9 789 aa15.58■□□□□ 0.08
PAPOLA-208ENST00000554135 CLCN6P51797 869 aa15.54■□□□□ 0.08
PAPOLA-208ENST00000554135 PHF12Q96QT6 1004 aa15.5■□□□□ 0.07
PAPOLA-208ENST00000554135 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
PAPOLA-208ENST00000554135 TSPYL2Q9H2G4 693 aaPredicted RBP15.45■□□□□ 0.06
PAPOLA-208ENST00000554135 ZBTB47Q9UFB7 747 aaPredicted RBP15.43■□□□□ 0.06
PAPOLA-208ENST00000554135 GALR2O43603 387 aaPredicted RBP15.41■□□□□ 0.06
PAPOLA-208ENST00000554135 POTEIP0CG38 1075 aa15.39■□□□□ 0.05
PAPOLA-208ENST00000554135 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
PAPOLA-208ENST00000554135 DCBLD2Q96PD2 775 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms