RNA–Protein interactions for RNA: ENST00000554064.5

FCF1-205, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-205ENST00000554064 NBR1Q14596 966 aa10.03□□□□□ -0.8
FCF1-205ENST00000554064 RBM33Q96EV2 1170 aaKnown RBP10.02□□□□□ -0.81
FCF1-205ENST00000554064 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
FCF1-205ENST00000554064 P3H3Q8IVL6 736 aa10□□□□□ -0.81
FCF1-205ENST00000554064 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
FCF1-205ENST00000554064 PPP1R3GB7ZBB8 358 aa9.99□□□□□ -0.81
FCF1-205ENST00000554064 ZBED2Q9BTP6 218 aa9.99□□□□□ -0.81
FCF1-205ENST00000554064 STAC3Q96MF2 364 aa9.98□□□□□ -0.81
FCF1-205ENST00000554064 VPS9D1Q9Y2B5 631 aa9.98□□□□□ -0.81
FCF1-205ENST00000554064 MAP3K7O43318 606 aa9.97□□□□□ -0.81
FCF1-205ENST00000554064 HRO43593 1189 aa9.97□□□□□ -0.81
FCF1-205ENST00000554064 COL9A1P20849 921 aa9.97□□□□□ -0.81
FCF1-205ENST00000554064 EN1Q05925 392 aaPredicted RBP9.97□□□□□ -0.81
FCF1-205ENST00000554064 SLC4A5Q9BY07 1137 aa9.97□□□□□ -0.81
FCF1-205ENST00000554064 C6orf132Q5T0Z8 1188 aa9.96□□□□□ -0.82
FCF1-205ENST00000554064 TSR1Q2NL82 804 aaKnown RBP9.93□□□□□ -0.82
FCF1-205ENST00000554064 PROX2Q3B8N5 592 aa9.93□□□□□ -0.82
FCF1-205ENST00000554064 PRIM1P49642 420 aaKnown RBP9.91□□□□□ -0.82
FCF1-205ENST00000554064 KDM2AQ9Y2K7 1162 aa9.91□□□□□ -0.82
FCF1-205ENST00000554064 OSBPP22059 807 aa9.9□□□□□ -0.82
FCF1-205ENST00000554064 MLLT3P42568 568 aaPredicted RBP9.9□□□□□ -0.82
FCF1-205ENST00000554064 MRPL50Q8N5N7 158 aaKnown RBP9.89□□□□□ -0.83
FCF1-205ENST00000554064 NBPF3Q9H094 633 aa9.89□□□□□ -0.83
FCF1-205ENST00000554064 KCTD12Q96CX2 325 aaKnown RBP9.88□□□□□ -0.83
FCF1-205ENST00000554064 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
FCF1-205ENST00000554064 GOLGA8CPA6NN73 597 aa9.87□□□□□ -0.83
FCF1-205ENST00000554064 BHMG1C9JSJ3 638 aaPredicted RBP9.87□□□□□ -0.83
FCF1-205ENST00000554064 RABGEF1Q9UJ41 708 aa9.87□□□□□ -0.83
FCF1-205ENST00000554064 TRIM6-TRIM34B2RNG4 842 aa9.86□□□□□ -0.83
FCF1-205ENST00000554064 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
FCF1-205ENST00000554064 SEMA3EO15041 775 aa9.85□□□□□ -0.83
FCF1-205ENST00000554064 KIAA1468Q9P260 1216 aa9.85□□□□□ -0.83
FCF1-205ENST00000554064 CERKQ8TCT0 537 aa9.84□□□□□ -0.83
FCF1-205ENST00000554064 ONECUT3O60422 494 aaPredicted RBP9.82□□□□□ -0.84
FCF1-205ENST00000554064 CDCA7LQ96GN5 454 aa9.82□□□□□ -0.84
FCF1-205ENST00000554064 SEPT9Q9UHD8 586 aaPredicted RBP9.82□□□□□ -0.84
FCF1-205ENST00000554064 WNT2BQ93097 391 aa9.81□□□□□ -0.84
FCF1-205ENST00000554064 HCSTQ9UBK5 93 aa9.81□□□□□ -0.84
FCF1-205ENST00000554064 TSKSQ9UJT2 592 aa9.81□□□□□ -0.84
FCF1-205ENST00000554064 PRSS12P56730 875 aa9.8□□□□□ -0.84
FCF1-205ENST00000554064 PACS2Q86VP3 889 aa9.79□□□□□ -0.84
FCF1-205ENST00000554064 PTPN5P54829 565 aa9.78□□□□□ -0.84
FCF1-205ENST00000554064 THSD4Q6ZMP0 1018 aa9.78□□□□□ -0.84
FCF1-205ENST00000554064 LAPTM4BQ86VI4 370 aa9.78□□□□□ -0.84
FCF1-205ENST00000554064 TESPA1A2RU30 521 aaPredicted RBP9.77□□□□□ -0.85
FCF1-205ENST00000554064 ANKK1Q8NFD2 765 aa9.77□□□□□ -0.85
FCF1-205ENST00000554064 FAM198AQ9UFP1 575 aa9.77□□□□□ -0.85
FCF1-205ENST00000554064 NUTM2FA1L443 756 aa9.76□□□□□ -0.85
FCF1-205ENST00000554064 NBPF26B4DH59 902 aa9.76□□□□□ -0.85
FCF1-205ENST00000554064 FAM98CQ17RN3 349 aaKnown RBP9.76□□□□□ -0.85
FCF1-205ENST00000554064 RBM27Q9P2N5 1060 aaKnown RBP9.76□□□□□ -0.85
FCF1-205ENST00000554064 SMAPO00193 183 aa9.75□□□□□ -0.85
FCF1-205ENST00000554064 PADI6Q6TGC4 694 aa9.75□□□□□ -0.85
FCF1-205ENST00000554064 ZFRQ96KR1 1074 aaKnown RBP9.75□□□□□ -0.85
FCF1-205ENST00000554064 NPDC1Q9NQX5 325 aaPredicted RBP9.75□□□□□ -0.85
FCF1-205ENST00000554064 PNMA3Q9UL41 463 aa9.75□□□□□ -0.85
FCF1-205ENST00000554064 SMYD5Q6GMV2 418 aa9.74□□□□□ -0.85
FCF1-205ENST00000554064 BCAMP50895 628 aa9.73□□□□□ -0.85
FCF1-205ENST00000554064 PTGDRQ13258 359 aa9.72□□□□□ -0.85
FCF1-205ENST00000554064 TATDN2Q93075 761 aa9.72□□□□□ -0.85
FCF1-205ENST00000554064 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
FCF1-205ENST00000554064 NUDT18Q6ZVK8 323 aa9.71□□□□□ -0.86
FCF1-205ENST00000554064 SOWAHBA6NEL2 793 aa9.7□□□□□ -0.86
FCF1-205ENST00000554064 RBM26Q5T8P6 1007 aaKnown RBP9.7□□□□□ -0.86
FCF1-205ENST00000554064 FCHSD2O94868 740 aa9.69□□□□□ -0.86
FCF1-205ENST00000554064 TTC13Q8NBP0 860 aa9.69□□□□□ -0.86
FCF1-205ENST00000554064 LRCH3Q96II8 777 aa9.69□□□□□ -0.86
FCF1-205ENST00000554064 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.69□□□□□ -0.86
FCF1-205ENST00000554064 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
FCF1-205ENST00000554064 SAMD7Q7Z3H4 446 aa9.66□□□□□ -0.86
FCF1-205ENST00000554064 HPS5Q9UPZ3 1129 aa9.65□□□□□ -0.86
FCF1-205ENST00000554064 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
FCF1-205ENST00000554064 RNF40O75150 1001 aa9.64□□□□□ -0.87
FCF1-205ENST00000554064 WBP1LQ9NX94 342 aa9.63□□□□□ -0.87
FCF1-205ENST00000554064 TSR3Q9UJK0 312 aaKnown RBP9.63□□□□□ -0.87
FCF1-205ENST00000554064 HDGFP51858 240 aaKnown RBP9.62□□□□□ -0.87
FCF1-205ENST00000554064 HIC1Q14526 733 aa9.62□□□□□ -0.87
FCF1-205ENST00000554064 GPIHBP1Q8IV16 184 aa9.62□□□□□ -0.87
FCF1-205ENST00000554064 FAM161AQ3B820 660 aa9.61□□□□□ -0.87
FCF1-205ENST00000554064 PPP4CP60510 307 aa9.6□□□□□ -0.87
FCF1-205ENST00000554064 SWT1Q5T5J6 900 aaKnown RBP9.6□□□□□ -0.87
FCF1-205ENST00000554064 NYAP1Q6ZVC0 841 aa9.6□□□□□ -0.87
FCF1-205ENST00000554064 RBM46Q8TBY0 533 aaKnown RBP9.6□□□□□ -0.87
FCF1-205ENST00000554064 EYA1Q99502 592 aa9.6□□□□□ -0.87
FCF1-205ENST00000554064 ADGRG1Q9Y653 693 aa9.6□□□□□ -0.87
FCF1-205ENST00000554064 GNPATO15228 680 aa9.59□□□□□ -0.87
FCF1-205ENST00000554064 GPR37O15354 613 aa9.59□□□□□ -0.87
FCF1-205ENST00000554064 DNAJB2P25686 324 aa9.57□□□□□ -0.88
FCF1-205ENST00000554064 FECHP22830 423 aa9.56□□□□□ -0.88
FCF1-205ENST00000554064 SLC4A3P48751 1232 aa9.56□□□□□ -0.88
FCF1-205ENST00000554064 SLF2Q8IX21 1173 aa9.56□□□□□ -0.88
FCF1-205ENST00000554064 RCCD1A6NED2 376 aa9.54□□□□□ -0.88
FCF1-205ENST00000554064 OATP04181 439 aa9.53□□□□□ -0.88
FCF1-205ENST00000554064 PXYLP1Q8TE99 480 aa9.53□□□□□ -0.88
FCF1-205ENST00000554064 TMEM134Q9H6X4 195 aa9.53□□□□□ -0.88
FCF1-205ENST00000554064 NECTIN2Q92692 538 aa9.52□□□□□ -0.89
FCF1-205ENST00000554064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.51□□□□□ -0.89
FCF1-205ENST00000554064 ITGBL1O95965 494 aaPredicted RBP9.51□□□□□ -0.89
FCF1-205ENST00000554064 METTL3Q86U44 580 aaKnown RBP9.51□□□□□ -0.89
FCF1-205ENST00000554064 APLP1P51693 650 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms