RNA–Protein interactions for RNA: ENST00000554064.5

FCF1-205, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-205ENST00000554064 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
FCF1-205ENST00000554064 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
FCF1-205ENST00000554064 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
FCF1-205ENST00000554064 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
FCF1-205ENST00000554064 FOXD1Q16676 465 aa18.55■□□□□ 0.56
FCF1-205ENST00000554064 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
FCF1-205ENST00000554064 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
FCF1-205ENST00000554064 ADRA2BP18089 450 aa17.62■□□□□ 0.41
FCF1-205ENST00000554064 PIAS4Q8N2W9 510 aaPredicted RBP17.48■□□□□ 0.39
FCF1-205ENST00000554064 MSH5O43196 834 aa17.24■□□□□ 0.35
FCF1-205ENST00000554064 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
FCF1-205ENST00000554064 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
FCF1-205ENST00000554064 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
FCF1-205ENST00000554064 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
FCF1-205ENST00000554064 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
FCF1-205ENST00000554064 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
FCF1-205ENST00000554064 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
FCF1-205ENST00000554064 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
FCF1-205ENST00000554064 HOXD11P31277 338 aaPredicted RBP15.43■□□□□ 0.06
FCF1-205ENST00000554064 KCNA4P22459 653 aa15.4■□□□□ 0.06
FCF1-205ENST00000554064 NPM3O75607 178 aaKnown RBP15.34■□□□□ 0.05
FCF1-205ENST00000554064 DCAF8L1A6NGE4 600 aa15.29■□□□□ 0.04
FCF1-205ENST00000554064 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
FCF1-205ENST00000554064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
FCF1-205ENST00000554064 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
FCF1-205ENST00000554064 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
FCF1-205ENST00000554064 CACNB1Q02641 598 aaPredicted RBP14.59□□□□□ -0.07
FCF1-205ENST00000554064 SLC4A2P04920 1241 aa14.54□□□□□ -0.08
FCF1-205ENST00000554064 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
FCF1-205ENST00000554064 U3KPZ7 1027 aaPredicted RBP14.47□□□□□ -0.09
FCF1-205ENST00000554064 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
FCF1-205ENST00000554064 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
FCF1-205ENST00000554064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
FCF1-205ENST00000554064 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
FCF1-205ENST00000554064 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
FCF1-205ENST00000554064 ZBTB22O15209 634 aa14.15□□□□□ -0.14
FCF1-205ENST00000554064 CAPN15O75808 1086 aa14.14□□□□□ -0.15
FCF1-205ENST00000554064 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
FCF1-205ENST00000554064 APLP2Q06481 763 aa14.13□□□□□ -0.15
FCF1-205ENST00000554064 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
FCF1-205ENST00000554064 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
FCF1-205ENST00000554064 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
FCF1-205ENST00000554064 DSG3P32926 999 aa13.92□□□□□ -0.18
FCF1-205ENST00000554064 ABCB7O75027 752 aa13.86□□□□□ -0.19
FCF1-205ENST00000554064 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
FCF1-205ENST00000554064 ATF5Q9Y2D1 282 aaPredicted RBP13.82□□□□□ -0.2
FCF1-205ENST00000554064 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
FCF1-205ENST00000554064 POLA2Q14181 598 aa13.68□□□□□ -0.22
FCF1-205ENST00000554064 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
FCF1-205ENST00000554064 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
FCF1-205ENST00000554064 FBLN2P98095 1184 aa13.3□□□□□ -0.28
FCF1-205ENST00000554064 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
FCF1-205ENST00000554064 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
FCF1-205ENST00000554064 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
FCF1-205ENST00000554064 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
FCF1-205ENST00000554064 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
FCF1-205ENST00000554064 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
FCF1-205ENST00000554064 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
FCF1-205ENST00000554064 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
FCF1-205ENST00000554064 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
FCF1-205ENST00000554064 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
FCF1-205ENST00000554064 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
FCF1-205ENST00000554064 PITPNM1O00562 1244 aa12.81□□□□□ -0.36
FCF1-205ENST00000554064 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
FCF1-205ENST00000554064 POTEHQ6S545 545 aa12.76□□□□□ -0.37
FCF1-205ENST00000554064 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
FCF1-205ENST00000554064 CLEC11AQ9Y240 323 aa12.74□□□□□ -0.37
FCF1-205ENST00000554064 PIP4P2Q8N4L2 257 aa12.63□□□□□ -0.39
FCF1-205ENST00000554064 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
FCF1-205ENST00000554064 FKBP8Q14318 412 aa12.58□□□□□ -0.4
FCF1-205ENST00000554064 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
FCF1-205ENST00000554064 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
FCF1-205ENST00000554064 PROM2Q8N271 834 aa12.5□□□□□ -0.41
FCF1-205ENST00000554064 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
FCF1-205ENST00000554064 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
FCF1-205ENST00000554064 HAX1O00165 279 aa12.32□□□□□ -0.44
FCF1-205ENST00000554064 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
FCF1-205ENST00000554064 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.45
FCF1-205ENST00000554064 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
FCF1-205ENST00000554064 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
FCF1-205ENST00000554064 MIER1Q8N108 512 aa12.17□□□□□ -0.46
FCF1-205ENST00000554064 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
FCF1-205ENST00000554064 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
FCF1-205ENST00000554064 EVX2Q03828 476 aa12.14□□□□□ -0.47
FCF1-205ENST00000554064 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
FCF1-205ENST00000554064 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
FCF1-205ENST00000554064 CD44P16070 742 aaKnown RBP12.12□□□□□ -0.47
FCF1-205ENST00000554064 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
FCF1-205ENST00000554064 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
FCF1-205ENST00000554064 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
FCF1-205ENST00000554064 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
FCF1-205ENST00000554064 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
FCF1-205ENST00000554064 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
FCF1-205ENST00000554064 TSPYL2Q9H2G4 693 aaPredicted RBP11.93□□□□□ -0.5
FCF1-205ENST00000554064 GABBR2O75899 941 aa11.91□□□□□ -0.5
FCF1-205ENST00000554064 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
FCF1-205ENST00000554064 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
FCF1-205ENST00000554064 PHF12Q96QT6 1004 aa11.88□□□□□ -0.51
FCF1-205ENST00000554064 NUBP1P53384 320 aa11.86□□□□□ -0.51
FCF1-205ENST00000554064 CLCN6P51797 869 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms