RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 KDM5CP41229 1560 aa7.24□□□□□ -1.25
TMEM55B-204ENST00000553602 KTN1Q86UP2 1357 aaKnown RBP7.23□□□□□ -1.25
TMEM55B-204ENST00000553602 VSIG10Q8N0Z9 540 aa7.23□□□□□ -1.25
TMEM55B-204ENST00000553602 TRIM52Q96A61 297 aa7.23□□□□□ -1.25
TMEM55B-204ENST00000553602 RBM42Q9BTD8 480 aaKnown RBP7.23□□□□□ -1.25
TMEM55B-204ENST00000553602 PRKRIP1Q9H875 184 aaPredicted RBP7.23□□□□□ -1.25
TMEM55B-204ENST00000553602 RBM19Q9Y4C8 960 aaKnown RBP7.23□□□□□ -1.25
TMEM55B-204ENST00000553602 ARHGEF5Q12774 1597 aa7.23□□□□□ -1.25
TMEM55B-204ENST00000553602 ZMYM4Q5VZL5 1548 aa7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 GPATCH8Q9UKJ3 1502 aaKnown RBP7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 PTPRGP23470 1445 aa7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 NUP160Q12769 1436 aa7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 SMG6Q86US8 1419 aaKnown RBP7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 NPM1P06748 294 aaKnown RBP eCLIP7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 HNRNPUQ00839 825 aaKnown RBP eCLIP7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 POTEHQ6S545 545 aa7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 L3MBTL2Q969R5 705 aa7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 RRP7BPQ9NSQ0 103 aa7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 SYNJ2O15056 1496 aa7.22□□□□□ -1.25
TMEM55B-204ENST00000553602 ABCA8O94911 1581 aa7.21□□□□□ -1.25
TMEM55B-204ENST00000553602 CEP170Q5SW79 1584 aa7.21□□□□□ -1.25
TMEM55B-204ENST00000553602 LAMC1P11047 1609 aa7.21□□□□□ -1.26
TMEM55B-204ENST00000553602 PPP4R2Q9NY27 417 aa7.21□□□□□ -1.26
TMEM55B-204ENST00000553602 MYT1LQ9UL68 1186 aa7.21□□□□□ -1.26
TMEM55B-204ENST00000553602 ERCC6Q03468 1493 aa7.21□□□□□ -1.26
TMEM55B-204ENST00000553602 CDC42BPAQ5VT25 1732 aa7.21□□□□□ -1.26
TMEM55B-204ENST00000553602 DHX29Q7Z478 1369 aaKnown RBP7.2□□□□□ -1.26
TMEM55B-204ENST00000553602 ANKRD30AQ9BXX3 1397 aa7.2□□□□□ -1.26
TMEM55B-204ENST00000553602 E9PCH4 1651 aa7.2□□□□□ -1.26
TMEM55B-204ENST00000553602 ABCC10Q5T3U5 1492 aa7.2□□□□□ -1.26
TMEM55B-204ENST00000553602 PAXIP1Q6ZW49 1069 aaPredicted RBP7.2□□□□□ -1.26
TMEM55B-204ENST00000553602 SPDYE1Q8NFV5 336 aaPredicted RBP7.2□□□□□ -1.26
TMEM55B-204ENST00000553602 HIRIP3Q9BW71 556 aaPredicted RBP7.2□□□□□ -1.26
TMEM55B-204ENST00000553602 KIF7Q2M1P5 1343 aa7.2□□□□□ -1.26
TMEM55B-204ENST00000553602 RNF123Q5XPI4 1314 aa7.2□□□□□ -1.26
TMEM55B-204ENST00000553602 INSRP06213 1382 aa7.2□□□□□ -1.26
TMEM55B-204ENST00000553602 CARMIL2Q6F5E8 1435 aa7.19□□□□□ -1.26
TMEM55B-204ENST00000553602 ZNF608Q9ULD9 1512 aaPredicted RBP7.19□□□□□ -1.26
TMEM55B-204ENST00000553602 BCANQ96GW7 911 aa7.19□□□□□ -1.26
TMEM55B-204ENST00000553602 BCORL1Q5H9F3 1711 aa7.18□□□□□ -1.26
TMEM55B-204ENST00000553602 MAST1Q9Y2H9 1570 aa7.18□□□□□ -1.26
TMEM55B-204ENST00000553602 GSE1Q14687 1217 aa7.18□□□□□ -1.26
TMEM55B-204ENST00000553602 AKT1S1Q96B36 256 aa7.18□□□□□ -1.26
TMEM55B-204ENST00000553602 CFAP44Q96MT7 982 aa7.18□□□□□ -1.26
TMEM55B-204ENST00000553602 USP47Q96K76 1375 aa7.18□□□□□ -1.26
TMEM55B-204ENST00000553602 ANKRD50Q9ULJ7 1429 aa7.18□□□□□ -1.26
TMEM55B-204ENST00000553602 CHGAP10645 457 aaKnown RBP7.17□□□□□ -1.26
TMEM55B-204ENST00000553602 NBPF8Q3BBV2 869 aa7.17□□□□□ -1.26
TMEM55B-204ENST00000553602 CHIC2Q9UKJ5 165 aa7.17□□□□□ -1.26
TMEM55B-204ENST00000553602 PRG4Q92954 1404 aaPredicted RBP7.17□□□□□ -1.26
TMEM55B-204ENST00000553602 UNC13BO14795 1591 aa7.16□□□□□ -1.26
TMEM55B-204ENST00000553602 SPRYD3Q8NCJ5 442 aa7.16□□□□□ -1.26
TMEM55B-204ENST00000553602 MRS2Q9HD23 443 aa7.16□□□□□ -1.26
TMEM55B-204ENST00000553602 LRPPRCP42704 1394 aaKnown RBP7.16□□□□□ -1.26
TMEM55B-204ENST00000553602 C9orf84Q5VXU9 1444 aa7.16□□□□□ -1.26
TMEM55B-204ENST00000553602 PREX2Q70Z35 1606 aa7.16□□□□□ -1.26
TMEM55B-204ENST00000553602 C11orf95C9JLR9 678 aaPredicted RBP7.15□□□□□ -1.26
TMEM55B-204ENST00000553602 BRD4O60885 1362 aaPredicted RBP7.15□□□□□ -1.26
TMEM55B-204ENST00000553602 KIF15Q9NS87 1388 aa7.15□□□□□ -1.26
TMEM55B-204ENST00000553602 PLB1Q6P1J6 1458 aa7.15□□□□□ -1.27
TMEM55B-204ENST00000553602 PLXNC1O60486 1568 aa7.15□□□□□ -1.27
TMEM55B-204ENST00000553602 EIF2AK4Q9P2K8 1649 aaKnown RBP7.15□□□□□ -1.27
TMEM55B-204ENST00000553602 CCDC141Q6ZP82 1450 aa7.14□□□□□ -1.27
TMEM55B-204ENST00000553602 CFDP1Q9UEE9 299 aaPredicted RBP7.14□□□□□ -1.27
TMEM55B-204ENST00000553602 TRPM1Q7Z4N2 1603 aa7.13□□□□□ -1.27
TMEM55B-204ENST00000553602 ATP10AO60312 1499 aa7.13□□□□□ -1.27
TMEM55B-204ENST00000553602 MAGI2Q86UL8 1455 aa7.13□□□□□ -1.27
TMEM55B-204ENST00000553602 GPRASP1Q5JY77 1395 aa7.13□□□□□ -1.27
TMEM55B-204ENST00000553602 NUBP1P53384 320 aa7.13□□□□□ -1.27
TMEM55B-204ENST00000553602 CLEC11AQ9Y240 323 aa7.13□□□□□ -1.27
TMEM55B-204ENST00000553602 NUDCQ9Y266 331 aa7.13□□□□□ -1.27
TMEM55B-204ENST00000553602 PLEKHH2Q8IVE3 1493 aa7.12□□□□□ -1.27
TMEM55B-204ENST00000553602 ZNF644Q9H582 1327 aaPredicted RBP7.12□□□□□ -1.27
TMEM55B-204ENST00000553602 PRR29P0C7W0 189 aa7.12□□□□□ -1.27
TMEM55B-204ENST00000553602 CCDC184Q52MB2 194 aa7.12□□□□□ -1.27
TMEM55B-204ENST00000553602 HS6ST3Q8IZP7 471 aa7.12□□□□□ -1.27
TMEM55B-204ENST00000553602 TAOK2Q9UL54 1235 aa7.12□□□□□ -1.27
TMEM55B-204ENST00000553602 IQGAP3Q86VI3 1631 aa7.12□□□□□ -1.27
TMEM55B-204ENST00000553602 FAM135AQ9P2D6 1515 aa7.11□□□□□ -1.27
TMEM55B-204ENST00000553602 ATP10BO94823 1461 aa7.11□□□□□ -1.27
TMEM55B-204ENST00000553602 WASHC2CQ9Y4E1 1318 aa7.11□□□□□ -1.27
TMEM55B-204ENST00000553602 DCAF8Q5TAQ9 597 aa7.11□□□□□ -1.27
TMEM55B-204ENST00000553602 RSPH4AQ5TD94 716 aa7.11□□□□□ -1.27
TMEM55B-204ENST00000553602 RNF17Q9BXT8 1623 aaKnown RBP7.11□□□□□ -1.27
TMEM55B-204ENST00000553602 SAMD9LQ8IVG5 1584 aa7.11□□□□□ -1.27
TMEM55B-204ENST00000553602 PRDM15P57071 1507 aaPredicted RBP7.11□□□□□ -1.27
TMEM55B-204ENST00000553602 COL17A1Q9UMD9 1497 aaPredicted RBP7.11□□□□□ -1.27
TMEM55B-204ENST00000553602 RALBP1Q15311 655 aa7.1□□□□□ -1.27
TMEM55B-204ENST00000553602 FAM212AQ96EL1 285 aa7.1□□□□□ -1.27
TMEM55B-204ENST00000553602 KDM2AQ9Y2K7 1162 aa7.1□□□□□ -1.27
TMEM55B-204ENST00000553602 PRAG1Q86YV5 1406 aa7.1□□□□□ -1.27
TMEM55B-204ENST00000553602 PARD3Q8TEW0 1356 aa7.09□□□□□ -1.27
TMEM55B-204ENST00000553602 SHROOM2Q13796 1616 aa7.09□□□□□ -1.27
TMEM55B-204ENST00000553602 MYBBP1AQ9BQG0 1328 aaKnown RBP7.09□□□□□ -1.27
TMEM55B-204ENST00000553602 REM2Q8IYK8 340 aaPredicted RBP7.09□□□□□ -1.27
TMEM55B-204ENST00000553602 PNISRQ8TF01 805 aaKnown RBP7.09□□□□□ -1.27
TMEM55B-204ENST00000553602 CREBZFQ9NS37 354 aa7.09□□□□□ -1.27
TMEM55B-204ENST00000553602 NUP155O75694 1391 aa7.08□□□□□ -1.28
TMEM55B-204ENST00000553602 NEURL4Q96JN8 1562 aa7.08□□□□□ -1.28
TMEM55B-204ENST00000553602 CDC42BPBQ9Y5S2 1711 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms