RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 FRAT2O75474 233 aaPredicted RBP12.2□□□□□ -0.46
SMARCC2-214ENST00000552674 DNMBPQ6XZF7 1577 aa12.19□□□□□ -0.46
SMARCC2-214ENST00000552674 ABCC5O15440 1437 aa12.19□□□□□ -0.46
SMARCC2-214ENST00000552674 APAF1O14727 1248 aa12.18□□□□□ -0.46
SMARCC2-214ENST00000552674 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
SMARCC2-214ENST00000552674 CCDC144AA2RUR9 1427 aa12.17□□□□□ -0.46
SMARCC2-214ENST00000552674 DHX29Q7Z478 1369 aaKnown RBP12.17□□□□□ -0.46
SMARCC2-214ENST00000552674 PRG4Q92954 1404 aaPredicted RBP12.17□□□□□ -0.46
SMARCC2-214ENST00000552674 TARBP1Q13395 1621 aaKnown RBP12.17□□□□□ -0.46
SMARCC2-214ENST00000552674 ABCA5Q8WWZ7 1642 aa12.17□□□□□ -0.46
SMARCC2-214ENST00000552674 CLUAP1Q96AJ1 413 aa12.17□□□□□ -0.46
SMARCC2-214ENST00000552674 NAP1L5Q96NT1 182 aaPredicted RBP12.17□□□□□ -0.46
SMARCC2-214ENST00000552674 ROCK1Q13464 1354 aa12.16□□□□□ -0.46
SMARCC2-214ENST00000552674 UGGT2Q9NYU1 1516 aa12.16□□□□□ -0.46
SMARCC2-214ENST00000552674 DNAJC5BQ9UF47 199 aa12.15□□□□□ -0.46
SMARCC2-214ENST00000552674 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
SMARCC2-214ENST00000552674 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
SMARCC2-214ENST00000552674 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
SMARCC2-214ENST00000552674 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
SMARCC2-214ENST00000552674 CUL7Q14999 1698 aa12.14□□□□□ -0.47
SMARCC2-214ENST00000552674 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
SMARCC2-214ENST00000552674 RRP7AQ9Y3A4 280 aaKnown RBP12.14□□□□□ -0.47
SMARCC2-214ENST00000552674 URB2Q14146 1524 aaKnown RBP12.14□□□□□ -0.47
SMARCC2-214ENST00000552674 RNF123Q5XPI4 1314 aa12.13□□□□□ -0.47
SMARCC2-214ENST00000552674 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
SMARCC2-214ENST00000552674 BCAR3O75815 825 aa12.11□□□□□ -0.47
SMARCC2-214ENST00000552674 GLIPR1L2Q4G1C9 344 aa12.11□□□□□ -0.47
SMARCC2-214ENST00000552674 L1TD1Q5T7N2 865 aaKnown RBP12.11□□□□□ -0.47
SMARCC2-214ENST00000552674 THOC2Q8NI27 1593 aaKnown RBP12.11□□□□□ -0.47
SMARCC2-214ENST00000552674 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
SMARCC2-214ENST00000552674 PANK1Q8TE04 598 aa12.1□□□□□ -0.47
SMARCC2-214ENST00000552674 TRIM44Q96DX7 344 aaPredicted RBP12.1□□□□□ -0.47
SMARCC2-214ENST00000552674 PPP2R1AP30153 589 aa12.1□□□□□ -0.47
SMARCC2-214ENST00000552674 MORC1Q86VD1 984 aa12.1□□□□□ -0.47
SMARCC2-214ENST00000552674 KDM6BO15054 1643 aa12.09□□□□□ -0.47
SMARCC2-214ENST00000552674 ANP32BQ92688 251 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-214ENST00000552674 SPATA31E1Q6ZUB1 1445 aa12.09□□□□□ -0.47
SMARCC2-214ENST00000552674 MFAP1P55081 439 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-214ENST00000552674 CFAP53Q96M91 514 aa12.08□□□□□ -0.48
SMARCC2-214ENST00000552674 TEX14Q8IWB6 1497 aa12.08□□□□□ -0.48
SMARCC2-214ENST00000552674 CTTNBP2Q8WZ74 1663 aa12.07□□□□□ -0.48
SMARCC2-214ENST00000552674 TCOF1Q13428 1488 aaKnown RBP12.07□□□□□ -0.48
SMARCC2-214ENST00000552674 E9PSI1 815 aa12.07□□□□□ -0.48
SMARCC2-214ENST00000552674 MAGI3Q5TCQ9 1506 aa12.07□□□□□ -0.48
SMARCC2-214ENST00000552674 TROQ12816 1431 aaPredicted RBP12.07□□□□□ -0.48
SMARCC2-214ENST00000552674 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
SMARCC2-214ENST00000552674 C9orf84Q5VXU9 1444 aa12.06□□□□□ -0.48
SMARCC2-214ENST00000552674 GOLGA6L3A6NEY3 463 aa12.06□□□□□ -0.48
SMARCC2-214ENST00000552674 PNNQ9H307 717 aaKnown RBP12.06□□□□□ -0.48
SMARCC2-214ENST00000552674 PBRM1Q86U86 1689 aa12.06□□□□□ -0.48
SMARCC2-214ENST00000552674 CGNL1Q0VF96 1302 aa12.05□□□□□ -0.48
SMARCC2-214ENST00000552674 RWDD1Q9H446 243 aaPredicted RBP12.05□□□□□ -0.48
SMARCC2-214ENST00000552674 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
SMARCC2-214ENST00000552674 HSCBQ8IWL3 235 aa12.05□□□□□ -0.48
SMARCC2-214ENST00000552674 PMFBP1Q8TBY8 1022 aa12.05□□□□□ -0.48
SMARCC2-214ENST00000552674 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
SMARCC2-214ENST00000552674 IQGAP2Q13576 1575 aa12.05□□□□□ -0.48
SMARCC2-214ENST00000552674 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
SMARCC2-214ENST00000552674 KDM5BQ9UGL1 1544 aa12.04□□□□□ -0.48
SMARCC2-214ENST00000552674 HSP90AB1P08238 724 aaKnown RBP12.04□□□□□ -0.48
SMARCC2-214ENST00000552674 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
SMARCC2-214ENST00000552674 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMARCC2-214ENST00000552674 POGKQ9P215 609 aa12.04□□□□□ -0.48
SMARCC2-214ENST00000552674 NCLP19338 710 aaKnown RBP12.03□□□□□ -0.48
SMARCC2-214ENST00000552674 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
SMARCC2-214ENST00000552674 DUSP27Q5VZP5 1158 aa12.03□□□□□ -0.48
SMARCC2-214ENST00000552674 LRRIQ1Q96JM4 1722 aa12.03□□□□□ -0.48
SMARCC2-214ENST00000552674 LRPPRCP42704 1394 aaKnown RBP12.03□□□□□ -0.48
SMARCC2-214ENST00000552674 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMARCC2-214ENST00000552674 WDR62O43379 1518 aa12.03□□□□□ -0.48
SMARCC2-214ENST00000552674 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.48
SMARCC2-214ENST00000552674 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
SMARCC2-214ENST00000552674 ITPRIPQ8IWB1 547 aa12.02□□□□□ -0.49
SMARCC2-214ENST00000552674 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
SMARCC2-214ENST00000552674 PZPP20742 1482 aa12.01□□□□□ -0.49
SMARCC2-214ENST00000552674 ERBINQ96RT1 1412 aa12.01□□□□□ -0.49
SMARCC2-214ENST00000552674 DISP3Q9P2K9 1392 aa12.01□□□□□ -0.49
SMARCC2-214ENST00000552674 SLFN5Q08AF3 891 aa12□□□□□ -0.49
SMARCC2-214ENST00000552674 PLB1Q6P1J6 1458 aa12□□□□□ -0.49
SMARCC2-214ENST00000552674 SMC4Q9NTJ3 1288 aa12□□□□□ -0.49
SMARCC2-214ENST00000552674 C8orf34Q49A92 452 aa12□□□□□ -0.49
SMARCC2-214ENST00000552674 PER1O15534 1290 aaPredicted RBP11.99□□□□□ -0.49
SMARCC2-214ENST00000552674 ERCC6Q03468 1493 aa11.99□□□□□ -0.49
SMARCC2-214ENST00000552674 PARD3Q8TEW0 1356 aa11.99□□□□□ -0.49
SMARCC2-214ENST00000552674 TRAK1Q9UPV9 953 aa11.99□□□□□ -0.49
SMARCC2-214ENST00000552674 RALGAPBQ86X10 1494 aa11.99□□□□□ -0.49
SMARCC2-214ENST00000552674 GOLGA6L22H0YM25 854 aa11.98□□□□□ -0.49
SMARCC2-214ENST00000552674 IGHDP01880 384 aa11.98□□□□□ -0.49
SMARCC2-214ENST00000552674 MYH16Q9H6N6 1097 aa11.97□□□□□ -0.49
SMARCC2-214ENST00000552674 KIF3BO15066 747 aa11.97□□□□□ -0.49
SMARCC2-214ENST00000552674 GCC2Q8IWJ2 1684 aa11.97□□□□□ -0.49
SMARCC2-214ENST00000552674 EFCAB2Q5VUJ9 269 aa11.97□□□□□ -0.49
SMARCC2-214ENST00000552674 FAM43AQ8N2R8 423 aa11.97□□□□□ -0.49
SMARCC2-214ENST00000552674 PDZRN3Q9UPQ7 1066 aa11.97□□□□□ -0.49
SMARCC2-214ENST00000552674 GPATCH8Q9UKJ3 1502 aaKnown RBP11.96□□□□□ -0.49
SMARCC2-214ENST00000552674 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
SMARCC2-214ENST00000552674 EIF3AQ14152 1382 aaKnown RBP11.96□□□□□ -0.5
SMARCC2-214ENST00000552674 SLC24A1O60721 1099 aa11.96□□□□□ -0.5
SMARCC2-214ENST00000552674 ARHGEF11O15085 1522 aa11.95□□□□□ -0.5
SMARCC2-214ENST00000552674 PDE3AQ14432 1141 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms