RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 FRMPD1Q5SYB0 1578 aa9.29□□□□□ -0.92
HOXB3-213ENST00000552000 NEO1Q92859 1461 aa9.29□□□□□ -0.92
HOXB3-213ENST00000552000 SOCS7O14512 581 aa9.29□□□□□ -0.92
HOXB3-213ENST00000552000 IFNL1Q8IU54 200 aa9.29□□□□□ -0.92
HOXB3-213ENST00000552000 FAM9AQ8IZU1 332 aaPredicted RBP9.28□□□□□ -0.92
HOXB3-213ENST00000552000 ARHGEF40Q8TER5 1519 aa9.27□□□□□ -0.93
HOXB3-213ENST00000552000 NUBP1P53384 320 aa9.25□□□□□ -0.93
HOXB3-213ENST00000552000 MMRN1Q13201 1228 aa9.25□□□□□ -0.93
HOXB3-213ENST00000552000 MLECQ14165 292 aa9.25□□□□□ -0.93
HOXB3-213ENST00000552000 DENND4BO75064 1496 aaPredicted RBP9.24□□□□□ -0.93
HOXB3-213ENST00000552000 RICTORQ6R327 1708 aa9.24□□□□□ -0.93
HOXB3-213ENST00000552000 POGZQ7Z3K3 1410 aa9.23□□□□□ -0.93
HOXB3-213ENST00000552000 FANCAO15360 1455 aa9.23□□□□□ -0.93
HOXB3-213ENST00000552000 SPNS2Q8IVW8 549 aa9.23□□□□□ -0.93
HOXB3-213ENST00000552000 SETD1BQ9UPS6 1966 aaKnown RBP9.23□□□□□ -0.93
HOXB3-213ENST00000552000 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
HOXB3-213ENST00000552000 PRXQ9BXM0 1461 aa9.22□□□□□ -0.93
HOXB3-213ENST00000552000 FER1L4A9Z1Z3 1794 aa9.22□□□□□ -0.93
HOXB3-213ENST00000552000 SNPHO15079 494 aa9.22□□□□□ -0.93
HOXB3-213ENST00000552000 RAPGEF6Q8TEU7 1601 aa9.22□□□□□ -0.93
HOXB3-213ENST00000552000 SIGLEC1Q9BZZ2 1709 aa9.22□□□□□ -0.93
HOXB3-213ENST00000552000 FHOD3Q2V2M9 1422 aa9.22□□□□□ -0.93
HOXB3-213ENST00000552000 YEATS2Q9ULM3 1422 aa9.22□□□□□ -0.93
HOXB3-213ENST00000552000 TMEM121BQ9BXQ6 578 aaPredicted RBP9.21□□□□□ -0.94
HOXB3-213ENST00000552000 ZFYVE16Q7Z3T8 1539 aa9.21□□□□□ -0.94
HOXB3-213ENST00000552000 IRX5P78411 483 aaPredicted RBP9.2□□□□□ -0.94
HOXB3-213ENST00000552000 SPATA31D1Q6ZQQ2 1576 aa9.2□□□□□ -0.94
HOXB3-213ENST00000552000 OCEL1Q9H607 264 aa9.19□□□□□ -0.94
HOXB3-213ENST00000552000 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.19□□□□□ -0.94
HOXB3-213ENST00000552000 NUP153P49790 1475 aaKnown RBP9.19□□□□□ -0.94
HOXB3-213ENST00000552000 ZMYM4Q5VZL5 1548 aa9.19□□□□□ -0.94
HOXB3-213ENST00000552000 EFCAB5A4FU69 1503 aa9.18□□□□□ -0.94
HOXB3-213ENST00000552000 PLEKHD1A6NEE1 506 aa9.18□□□□□ -0.94
HOXB3-213ENST00000552000 CEBPAP49715 358 aaPredicted RBP9.18□□□□□ -0.94
HOXB3-213ENST00000552000 SAMD9Q5K651 1589 aa9.18□□□□□ -0.94
HOXB3-213ENST00000552000 TTC37Q6PGP7 1564 aa9.18□□□□□ -0.94
HOXB3-213ENST00000552000 STRCQ7RTU9 1775 aa9.17□□□□□ -0.94
HOXB3-213ENST00000552000 PREX1Q8TCU6 1659 aa9.17□□□□□ -0.94
HOXB3-213ENST00000552000 CFAP74Q9C0B2 1584 aa9.17□□□□□ -0.94
HOXB3-213ENST00000552000 RANGAP1P46060 587 aaPredicted RBP9.17□□□□□ -0.94
HOXB3-213ENST00000552000 HECW1Q76N89 1606 aa9.16□□□□□ -0.94
HOXB3-213ENST00000552000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.15□□□□□ -0.941e-8■■□□□ 11.7
HOXB3-213ENST00000552000 MAGI2Q86UL8 1455 aa9.15□□□□□ -0.94
HOXB3-213ENST00000552000 DCAF8Q5TAQ9 597 aa9.15□□□□□ -0.94
HOXB3-213ENST00000552000 ARHGEF12Q9NZN5 1544 aa9.15□□□□□ -0.95
HOXB3-213ENST00000552000 SCAPERQ9BY12 1400 aa9.14□□□□□ -0.95
HOXB3-213ENST00000552000 ATP10AO60312 1499 aa9.14□□□□□ -0.95
HOXB3-213ENST00000552000 PYGBP11216 843 aa9.13□□□□□ -0.95
HOXB3-213ENST00000552000 UHRF1BP1Q6BDS2 1440 aa9.13□□□□□ -0.95
HOXB3-213ENST00000552000 MARVELD3Q96A59 401 aa9.12□□□□□ -0.95
HOXB3-213ENST00000552000 C9orf84Q5VXU9 1444 aa9.12□□□□□ -0.95
HOXB3-213ENST00000552000 C3orf67Q6ZVT6 689 aa9.11□□□□□ -0.95
HOXB3-213ENST00000552000 PTPRTO14522 1441 aa9.11□□□□□ -0.95
HOXB3-213ENST00000552000 GOLGA2Q08379 1002 aa9.1□□□□□ -0.95
HOXB3-213ENST00000552000 CDK13Q14004 1512 aaKnown RBP9.1□□□□□ -0.95
HOXB3-213ENST00000552000 LTBP4Q8N2S1 1624 aa9.09□□□□□ -0.95
HOXB3-213ENST00000552000 PLCH2O75038 1416 aa9.09□□□□□ -0.95
HOXB3-213ENST00000552000 PCDHB8Q9UN66 801 aa9.09□□□□□ -0.95
HOXB3-213ENST00000552000 EFCAB2Q5VUJ9 269 aa9.08□□□□□ -0.96
HOXB3-213ENST00000552000 MYT1LQ9UL68 1186 aa9.08□□□□□ -0.96
HOXB3-213ENST00000552000 EMP3P54852 163 aa9.07□□□□□ -0.96
HOXB3-213ENST00000552000 AFAP1Q8N556 730 aa9.07□□□□□ -0.96
HOXB3-213ENST00000552000 C3P01024 1663 aa9.07□□□□□ -0.96
HOXB3-213ENST00000552000 IQSEC2Q5JU85 1478 aa9.06□□□□□ -0.96
HOXB3-213ENST00000552000 MYO5CQ9NQX4 1742 aa9.05□□□□□ -0.96
HOXB3-213ENST00000552000 UBAP1LF5GYI3 381 aa9.05□□□□□ -0.96
HOXB3-213ENST00000552000 MKRN3Q13064 507 aaKnown RBP9.05□□□□□ -0.96
HOXB3-213ENST00000552000 L3MBTL3Q96JM7 780 aaPredicted RBP9.05□□□□□ -0.96
HOXB3-213ENST00000552000 ESF1Q9H501 851 aaKnown RBP9.05□□□□□ -0.96
HOXB3-213ENST00000552000 ATP1B4Q9UN42 357 aaPredicted RBP9.05□□□□□ -0.96
HOXB3-213ENST00000552000 NCOA1Q15788 1441 aa9.05□□□□□ -0.96
HOXB3-213ENST00000552000 ZNF518AQ6AHZ1 1483 aa9.04□□□□□ -0.96
HOXB3-213ENST00000552000 TRAPPC8Q9Y2L5 1435 aa9.04□□□□□ -0.96
HOXB3-213ENST00000552000 DIP2CQ9Y2E4 1556 aa9.03□□□□□ -0.96
HOXB3-213ENST00000552000 FKBP8Q14318 412 aa9.03□□□□□ -0.96
HOXB3-213ENST00000552000 ZNF467Q7Z7K2 595 aaPredicted RBP9.03□□□□□ -0.96
HOXB3-213ENST00000552000 KDM5CP41229 1560 aa9.03□□□□□ -0.96
HOXB3-213ENST00000552000 ZNF335Q9H4Z2 1342 aaPredicted RBP9.03□□□□□ -0.96
HOXB3-213ENST00000552000 ABCA6Q8N139 1617 aa9.02□□□□□ -0.96
HOXB3-213ENST00000552000 ARHGAP5Q13017 1502 aa9.02□□□□□ -0.97
HOXB3-213ENST00000552000 NCKAP5LQ9HCH0 1330 aa9.02□□□□□ -0.97
HOXB3-213ENST00000552000 KIF14Q15058 1648 aa9.02□□□□□ -0.97
HOXB3-213ENST00000552000 CAMSAP1Q5T5Y3 1602 aa9.02□□□□□ -0.97
HOXB3-213ENST00000552000 REREQ9P2R6 1566 aa9.01□□□□□ -0.97
HOXB3-213ENST00000552000 PDCD7Q8N8D1 485 aaKnown RBP9□□□□□ -0.97
HOXB3-213ENST00000552000 CDK11AQ9UQ88 783 aaPredicted RBP9□□□□□ -0.97
HOXB3-213ENST00000552000 AGLP35573 1532 aa9□□□□□ -0.97
HOXB3-213ENST00000552000 CNTLNQ9NXG0 1405 aa8.99□□□□□ -0.97
HOXB3-213ENST00000552000 GSE1Q14687 1217 aa8.99□□□□□ -0.97
HOXB3-213ENST00000552000 FBXO3Q9UK99 471 aa8.99□□□□□ -0.97
HOXB3-213ENST00000552000 MLH3Q9UHC1 1453 aa8.99□□□□□ -0.97
HOXB3-213ENST00000552000 TROQ12816 1431 aaPredicted RBP8.98□□□□□ -0.97
HOXB3-213ENST00000552000 CDC42BPBQ9Y5S2 1711 aa8.98□□□□□ -0.97
HOXB3-213ENST00000552000 FAM205CA6NFA0 338 aa8.98□□□□□ -0.97
HOXB3-213ENST00000552000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.98□□□□□ -0.97
HOXB3-213ENST00000552000 POTEB3A0JP26 581 aa8.97□□□□□ -0.97
HOXB3-213ENST00000552000 HSPA1LP34931 641 aa8.97□□□□□ -0.97
HOXB3-213ENST00000552000 POTEBQ6S5H4 581 aa8.97□□□□□ -0.97
HOXB3-213ENST00000552000 KLHL34Q8N239 644 aa8.97□□□□□ -0.97
HOXB3-213ENST00000552000 HS3ST6Q96QI5 342 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms