RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
CALCOCO1-217ENST00000549935 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
CALCOCO1-217ENST00000549935 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.33
CALCOCO1-217ENST00000549935 KDM2AQ9Y2K7 1162 aa17.1■□□□□ 0.33
CALCOCO1-217ENST00000549935 BRD4O60885 1362 aaPredicted RBP17.1■□□□□ 0.33
CALCOCO1-217ENST00000549935 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
CALCOCO1-217ENST00000549935 KIF15Q9NS87 1388 aa17.09■□□□□ 0.33
CALCOCO1-217ENST00000549935 ARHGEF12Q9NZN5 1544 aa17.09■□□□□ 0.33
CALCOCO1-217ENST00000549935 KDM5DQ9BY66 1539 aa17.08■□□□□ 0.32
CALCOCO1-217ENST00000549935 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
CALCOCO1-217ENST00000549935 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
CALCOCO1-217ENST00000549935 SENP3-EIF4A1A0A087X0R7 540 aa17.06■□□□□ 0.32
CALCOCO1-217ENST00000549935 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
CALCOCO1-217ENST00000549935 MS4A1P11836 297 aa17.06■□□□□ 0.32
CALCOCO1-217ENST00000549935 RALBP1Q15311 655 aa17.06■□□□□ 0.32
CALCOCO1-217ENST00000549935 ST20-MTHFSA0A0A6YYL1 179 aa17.05■□□□□ 0.32
CALCOCO1-217ENST00000549935 RRP1P56182 461 aaKnown RBP17.05■□□□□ 0.32
CALCOCO1-217ENST00000549935 PDE3BQ13370 1112 aa17.04■□□□□ 0.32
CALCOCO1-217ENST00000549935 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
CALCOCO1-217ENST00000549935 PTPRGP23470 1445 aa17.03■□□□□ 0.32
CALCOCO1-217ENST00000549935 ARHGEF5Q12774 1597 aa17.03■□□□□ 0.32
CALCOCO1-217ENST00000549935 INSRP06213 1382 aa17.01■□□□□ 0.31
CALCOCO1-217ENST00000549935 E9PCH4 1651 aa17.01■□□□□ 0.31
CALCOCO1-217ENST00000549935 CCDC141Q6ZP82 1450 aa17.01■□□□□ 0.31
CALCOCO1-217ENST00000549935 SAMD9LQ8IVG5 1584 aa17■□□□□ 0.31
CALCOCO1-217ENST00000549935 FAM135AQ9P2D6 1515 aa17■□□□□ 0.31
CALCOCO1-217ENST00000549935 BACH2Q9BYV9 841 aa16.99■□□□□ 0.31
CALCOCO1-217ENST00000549935 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
CALCOCO1-217ENST00000549935 RCAN3Q9UKA8 241 aa16.99■□□□□ 0.31
CALCOCO1-217ENST00000549935 ZMYM4Q5VZL5 1548 aa16.99■□□□□ 0.31
CALCOCO1-217ENST00000549935 PREX2Q70Z35 1606 aa16.98■□□□□ 0.31
CALCOCO1-217ENST00000549935 PDE4AP27815 886 aa16.98■□□□□ 0.31
CALCOCO1-217ENST00000549935 EXOC6Q8TAG9 804 aa16.96■□□□□ 0.31
CALCOCO1-217ENST00000549935 CCDC144AA2RUR9 1427 aa16.96■□□□□ 0.31
CALCOCO1-217ENST00000549935 PPM1GO15355 546 aaPredicted RBP16.95■□□□□ 0.3
CALCOCO1-217ENST00000549935 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
CALCOCO1-217ENST00000549935 PARD3Q8TEW0 1356 aa16.94■□□□□ 0.3
CALCOCO1-217ENST00000549935 SYCP2Q9BX26 1530 aa16.94■□□□□ 0.3
CALCOCO1-217ENST00000549935 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
CALCOCO1-217ENST00000549935 NLRP13Q86W25 1043 aa16.94■□□□□ 0.3
CALCOCO1-217ENST00000549935 PRAG1Q86YV5 1406 aa16.94■□□□□ 0.3
CALCOCO1-217ENST00000549935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■■□□ 15.5
CALCOCO1-217ENST00000549935 RSPH4AQ5TD94 716 aa16.93■□□□□ 0.3
CALCOCO1-217ENST00000549935 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
CALCOCO1-217ENST00000549935 ARHGAP5Q13017 1502 aa16.92■□□□□ 0.3
CALCOCO1-217ENST00000549935 NBPF1Q3BBV0 1214 aa16.91■□□□□ 0.3
CALCOCO1-217ENST00000549935 TTC37Q6PGP7 1564 aa16.91■□□□□ 0.3
CALCOCO1-217ENST00000549935 DDRGK1Q96HY6 314 aa16.89■□□□□ 0.29
CALCOCO1-217ENST00000549935 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
CALCOCO1-217ENST00000549935 NEFMP07197 916 aa16.88■□□□□ 0.29
CALCOCO1-217ENST00000549935 UNC13BO14795 1591 aa16.88■□□□□ 0.29
CALCOCO1-217ENST00000549935 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
CALCOCO1-217ENST00000549935 A2MP01023 1474 aa16.87■□□□□ 0.29
CALCOCO1-217ENST00000549935 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
CALCOCO1-217ENST00000549935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.87■□□□□ 0.29
CALCOCO1-217ENST00000549935 MAST1Q9Y2H9 1570 aa16.86■□□□□ 0.29
CALCOCO1-217ENST00000549935 NPM2Q86SE8 214 aaKnown RBP16.86■□□□□ 0.29
CALCOCO1-217ENST00000549935 SALL2Q9Y467 1007 aaPredicted RBP16.86■□□□□ 0.29
CALCOCO1-217ENST00000549935 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
CALCOCO1-217ENST00000549935 CHD1O14646 1710 aa16.85■□□□□ 0.29
CALCOCO1-217ENST00000549935 GPRASP1Q5JY77 1395 aa16.84■□□□□ 0.29
CALCOCO1-217ENST00000549935 IQGAP3Q86VI3 1631 aa16.83■□□□□ 0.28
CALCOCO1-217ENST00000549935 MYO5CQ9NQX4 1742 aa16.83■□□□□ 0.28
CALCOCO1-217ENST00000549935 DISP3Q9P2K9 1392 aa16.83■□□□□ 0.28
CALCOCO1-217ENST00000549935 PLXNC1O60486 1568 aa16.83■□□□□ 0.28
CALCOCO1-217ENST00000549935 COL17A1Q9UMD9 1497 aaPredicted RBP16.82■□□□□ 0.28
CALCOCO1-217ENST00000549935 PRKCSHP14314 528 aaPredicted RBP16.82■□□□□ 0.28
CALCOCO1-217ENST00000549935 IL27Q8NEV9 243 aa16.82■□□□□ 0.28
CALCOCO1-217ENST00000549935 LAMC1P11047 1609 aa16.82■□□□□ 0.28
CALCOCO1-217ENST00000549935 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
CALCOCO1-217ENST00000549935 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
CALCOCO1-217ENST00000549935 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
CALCOCO1-217ENST00000549935 TESK2Q96S53 571 aa16.81■□□□□ 0.28
CALCOCO1-217ENST00000549935 DUOX2Q9NRD8 1548 aa16.79■□□□□ 0.28
CALCOCO1-217ENST00000549935 ANO8Q9HCE9 1232 aaPredicted RBP16.79■□□□□ 0.28
CALCOCO1-217ENST00000549935 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
CALCOCO1-217ENST00000549935 ERCC6L2Q5T890 1561 aa16.79■□□□□ 0.28
CALCOCO1-217ENST00000549935 ABCC2Q92887 1545 aa16.78■□□□□ 0.28
CALCOCO1-217ENST00000549935 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
CALCOCO1-217ENST00000549935 CDCA7LQ96GN5 454 aa16.78■□□□□ 0.28
CALCOCO1-217ENST00000549935 ERBINQ96RT1 1412 aa16.78■□□□□ 0.28
CALCOCO1-217ENST00000549935 KDM2BQ8NHM5 1336 aa16.78■□□□□ 0.28
CALCOCO1-217ENST00000549935 PANK3Q9H999 370 aa16.78■□□□□ 0.28
CALCOCO1-217ENST00000549935 CRBNQ96SW2 442 aa16.76■□□□□ 0.27
CALCOCO1-217ENST00000549935 TMF1P82094 1093 aa16.76■□□□□ 0.27
CALCOCO1-217ENST00000549935 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
CALCOCO1-217ENST00000549935 ATP10AO60312 1499 aa16.75■□□□□ 0.27
CALCOCO1-217ENST00000549935 GSE1Q14687 1217 aa16.75■□□□□ 0.27
CALCOCO1-217ENST00000549935 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
CALCOCO1-217ENST00000549935 PLCH2O75038 1416 aa16.72■□□□□ 0.27
CALCOCO1-217ENST00000549935 PLIN1O60240 522 aa16.72■□□□□ 0.27
CALCOCO1-217ENST00000549935 NFKBIBQ15653 356 aa16.72■□□□□ 0.27
CALCOCO1-217ENST00000549935 EFCAB2Q5VUJ9 269 aa16.71■□□□□ 0.27
CALCOCO1-217ENST00000549935 RNF17Q9BXT8 1623 aaKnown RBP16.71■□□□□ 0.27
CALCOCO1-217ENST00000549935 TRAPPC8Q9Y2L5 1435 aa16.7■□□□□ 0.26
CALCOCO1-217ENST00000549935 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
CALCOCO1-217ENST00000549935 ABCC1P33527 1531 aa16.69■□□□□ 0.26
CALCOCO1-217ENST00000549935 ZCCHC11Q5TAX3 1644 aaKnown RBP16.68■□□□□ 0.26
CALCOCO1-217ENST00000549935 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
CALCOCO1-217ENST00000549935 ZNF521Q96K83 1311 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms