RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 KIDINS220Q9ULH0 1771 aa14.21□□□□□ -0.13
RAB5B-206ENST00000549505 PKD2Q13563 968 aa14.21□□□□□ -0.14
RAB5B-206ENST00000549505 TRPM2O94759 1503 aa14.2□□□□□ -0.14
RAB5B-206ENST00000549505 MLH3Q9UHC1 1453 aa14.2□□□□□ -0.14
RAB5B-206ENST00000549505 E9PCH4 1651 aa14.19□□□□□ -0.14
RAB5B-206ENST00000549505 ZNF518AQ6AHZ1 1483 aa14.19□□□□□ -0.14
RAB5B-206ENST00000549505 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
RAB5B-206ENST00000549505 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
RAB5B-206ENST00000549505 ARID4BQ4LE39 1312 aaPredicted RBP14.18□□□□□ -0.14
RAB5B-206ENST00000549505 CENPBP07199 599 aaPredicted RBP14.17□□□□□ -0.14
RAB5B-206ENST00000549505 CEP152O94986 1710 aa14.17□□□□□ -0.14
RAB5B-206ENST00000549505 NBPF8Q3BBV2 869 aa14.17□□□□□ -0.14
RAB5B-206ENST00000549505 GPRASP1Q5JY77 1395 aa14.16□□□□□ -0.14
RAB5B-206ENST00000549505 POGZQ7Z3K3 1410 aa14.16□□□□□ -0.14
RAB5B-206ENST00000549505 CCER2I3L3R5 266 aa14.16□□□□□ -0.14
RAB5B-206ENST00000549505 SPHKAPQ2M3C7 1700 aa14.16□□□□□ -0.14
RAB5B-206ENST00000549505 DHX29Q7Z478 1369 aaKnown RBP14.15□□□□□ -0.14
RAB5B-206ENST00000549505 FOXD1Q16676 465 aa14.15□□□□□ -0.14
RAB5B-206ENST00000549505 HECW2Q9P2P5 1572 aa14.15□□□□□ -0.14
RAB5B-206ENST00000549505 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
RAB5B-206ENST00000549505 FRMPD1Q5SYB0 1578 aa14.13□□□□□ -0.15
RAB5B-206ENST00000549505 SCAPERQ9BY12 1400 aa14.13□□□□□ -0.15
RAB5B-206ENST00000549505 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
RAB5B-206ENST00000549505 HSPA5P11021 654 aaKnown RBP14.13□□□□□ -0.15
RAB5B-206ENST00000549505 PRAG1Q86YV5 1406 aa14.12□□□□□ -0.15
RAB5B-206ENST00000549505 KIAA1210Q9ULL0 1709 aa14.12□□□□□ -0.15
RAB5B-206ENST00000549505 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
RAB5B-206ENST00000549505 STAC3Q96MF2 364 aa14.12□□□□□ -0.15
RAB5B-206ENST00000549505 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
RAB5B-206ENST00000549505 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
RAB5B-206ENST00000549505 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
RAB5B-206ENST00000549505 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
RAB5B-206ENST00000549505 RICTORQ6R327 1708 aa14.12□□□□□ -0.15
RAB5B-206ENST00000549505 CD109Q6YHK3 1445 aa14.11□□□□□ -0.15
RAB5B-206ENST00000549505 EFCAB6Q5THR3 1501 aa14.11□□□□□ -0.15
RAB5B-206ENST00000549505 A2MP01023 1474 aa14.11□□□□□ -0.15
RAB5B-206ENST00000549505 CNTLNQ9NXG0 1405 aa14.11□□□□□ -0.15
RAB5B-206ENST00000549505 ZMYM4Q5VZL5 1548 aa14.11□□□□□ -0.15
RAB5B-206ENST00000549505 CCDC7Q96M83 1385 aa14.11□□□□□ -0.15
RAB5B-206ENST00000549505 CCDC144AA2RUR9 1427 aa14.11□□□□□ -0.15
RAB5B-206ENST00000549505 WASHC2AQ641Q2 1341 aa14.1□□□□□ -0.15
RAB5B-206ENST00000549505 REREQ9P2R6 1566 aa14.09□□□□□ -0.15
RAB5B-206ENST00000549505 IFT172Q9UG01 1749 aa14.09□□□□□ -0.15
RAB5B-206ENST00000549505 ABCA6Q8N139 1617 aa14.08□□□□□ -0.16
RAB5B-206ENST00000549505 MADDQ8WXG6 1647 aa14.08□□□□□ -0.16
RAB5B-206ENST00000549505 ZC3H13Q5T200 1668 aaKnown RBP14.08□□□□□ -0.16
RAB5B-206ENST00000549505 CLTCL1P53675 1640 aa14.08□□□□□ -0.16
RAB5B-206ENST00000549505 DIP2BQ9P265 1576 aa14.06□□□□□ -0.16
RAB5B-206ENST00000549505 PPRC1Q5VV67 1664 aaKnown RBP14.06□□□□□ -0.16
RAB5B-206ENST00000549505 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
RAB5B-206ENST00000549505 MYOM2P54296 1465 aa14.05□□□□□ -0.16
RAB5B-206ENST00000549505 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
RAB5B-206ENST00000549505 IQGAP1P46940 1657 aa14.04□□□□□ -0.16
RAB5B-206ENST00000549505 NRXN1Q9ULB1 1477 aa14.04□□□□□ -0.16
RAB5B-206ENST00000549505 AFAP1Q8N556 730 aa14.04□□□□□ -0.16
RAB5B-206ENST00000549505 USP47Q96K76 1375 aa14.04□□□□□ -0.16
RAB5B-206ENST00000549505 DDX10Q13206 875 aaKnown RBP14.04□□□□□ -0.16
RAB5B-206ENST00000549505 ROCK2O75116 1388 aaKnown RBP14.03□□□□□ -0.16
RAB5B-206ENST00000549505 KANK1Q14678 1352 aa14.02□□□□□ -0.16
RAB5B-206ENST00000549505 PIK3C2BO00750 1634 aa14.02□□□□□ -0.17
RAB5B-206ENST00000549505 ARHGAP31Q2M1Z3 1444 aa14.01□□□□□ -0.17
RAB5B-206ENST00000549505 ADGRB3O60242 1522 aa14□□□□□ -0.17
RAB5B-206ENST00000549505 MYT1Q01538 1121 aa14□□□□□ -0.17
RAB5B-206ENST00000549505 KIF7Q2M1P5 1343 aa13.99□□□□□ -0.17
RAB5B-206ENST00000549505 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
RAB5B-206ENST00000549505 ABCC3O15438 1527 aa13.99□□□□□ -0.17
RAB5B-206ENST00000549505 CAMSAP1Q5T5Y3 1602 aa13.98□□□□□ -0.17
RAB5B-206ENST00000549505 AGLP35573 1532 aa13.98□□□□□ -0.17
RAB5B-206ENST00000549505 ANP32CO43423 234 aa13.98□□□□□ -0.17
RAB5B-206ENST00000549505 KIF1BO60333 1816 aa13.97□□□□□ -0.17
RAB5B-206ENST00000549505 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
RAB5B-206ENST00000549505 SETBP1Q9Y6X0 1596 aa13.96□□□□□ -0.17
RAB5B-206ENST00000549505 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.17
RAB5B-206ENST00000549505 NOS1P29475 1434 aa13.96□□□□□ -0.18
RAB5B-206ENST00000549505 COL17A1Q9UMD9 1497 aaPredicted RBP13.96□□□□□ -0.18
RAB5B-206ENST00000549505 MROH2AA6NES4 1674 aa13.94□□□□□ -0.18
RAB5B-206ENST00000549505 HIRIP3Q9BW71 556 aaPredicted RBP13.93□□□□□ -0.18
RAB5B-206ENST00000549505 PPLO60437 1756 aa13.93□□□□□ -0.18
RAB5B-206ENST00000549505 DCAF11Q8TEB1 546 aa13.91□□□□□ -0.18
RAB5B-206ENST00000549505 SIGLEC1Q9BZZ2 1709 aa13.91□□□□□ -0.18
RAB5B-206ENST00000549505 NPATQ14207 1427 aa13.91□□□□□ -0.18
RAB5B-206ENST00000549505 KIF13AQ9H1H9 1805 aa13.89□□□□□ -0.19
RAB5B-206ENST00000549505 SYNMO15061 1565 aa13.89□□□□□ -0.19
RAB5B-206ENST00000549505 CARD11Q9BXL7 1154 aa13.88□□□□□ -0.19
RAB5B-206ENST00000549505 PRKRIP1Q9H875 184 aaPredicted RBP13.88□□□□□ -0.19
RAB5B-206ENST00000549505 SCAF11Q99590 1463 aaKnown RBP13.88□□□□□ -0.19
RAB5B-206ENST00000549505 KIF3BO15066 747 aa13.87□□□□□ -0.19
RAB5B-206ENST00000549505 ZFYVE9O95405 1425 aa13.87□□□□□ -0.19
RAB5B-206ENST00000549505 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.19
RAB5B-206ENST00000549505 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
RAB5B-206ENST00000549505 TESK2Q96S53 571 aa13.87□□□□□ -0.19
RAB5B-206ENST00000549505 PPP6R1Q9UPN7 881 aa13.87□□□□□ -0.19
RAB5B-206ENST00000549505 INSRP06213 1382 aa13.87□□□□□ -0.19
RAB5B-206ENST00000549505 RPGRIP1LQ68CZ1 1315 aa13.86□□□□□ -0.19
RAB5B-206ENST00000549505 SBNO2Q9Y2G9 1366 aa13.85□□□□□ -0.19
RAB5B-206ENST00000549505 PREX1Q8TCU6 1659 aa13.84□□□□□ -0.19
RAB5B-206ENST00000549505 ARHGEF40Q8TER5 1519 aa13.84□□□□□ -0.19
RAB5B-206ENST00000549505 UGGT1Q9NYU2 1555 aa13.84□□□□□ -0.19
RAB5B-206ENST00000549505 ADGRB1O14514 1584 aa13.83□□□□□ -0.2
RAB5B-206ENST00000549505 PIK3C2GO75747 1445 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms