RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 CSB-PGBD3P0DP91 1061 aa11.8□□□□□ -0.52
PPFIA2-216ENST00000549396 MCCP23508 829 aa11.8□□□□□ -0.52
PPFIA2-216ENST00000549396 KIF14Q15058 1648 aa11.8□□□□□ -0.52
PPFIA2-216ENST00000549396 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-216ENST00000549396 ARAP1Q96P48 1450 aa11.8□□□□□ -0.52
PPFIA2-216ENST00000549396 OS9Q13438 667 aaPredicted RBP11.79□□□□□ -0.52
PPFIA2-216ENST00000549396 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
PPFIA2-216ENST00000549396 C9orf84Q5VXU9 1444 aa11.79□□□□□ -0.52
PPFIA2-216ENST00000549396 STK31Q9BXU1 1019 aa11.78□□□□□ -0.52
PPFIA2-216ENST00000549396 TMX4Q9H1E5 349 aaPredicted RBP11.78□□□□□ -0.52
PPFIA2-216ENST00000549396 SLC52A1Q9NWF4 448 aa11.78□□□□□ -0.52
PPFIA2-216ENST00000549396 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
PPFIA2-216ENST00000549396 DAPK1P53355 1430 aa11.78□□□□□ -0.52
PPFIA2-216ENST00000549396 COG3Q96JB2 828 aa11.77□□□□□ -0.53
PPFIA2-216ENST00000549396 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
PPFIA2-216ENST00000549396 CDK11BP21127 795 aaKnown RBP11.77□□□□□ -0.53
PPFIA2-216ENST00000549396 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
PPFIA2-216ENST00000549396 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
PPFIA2-216ENST00000549396 EPRSP07814 1512 aaKnown RBP11.76□□□□□ -0.53
PPFIA2-216ENST00000549396 HMMRO75330 724 aa11.76□□□□□ -0.53
PPFIA2-216ENST00000549396 AEBP2Q6ZN18 517 aaPredicted RBP11.76□□□□□ -0.53
PPFIA2-216ENST00000549396 USP47Q96K76 1375 aa11.75□□□□□ -0.53
PPFIA2-216ENST00000549396 AMPHP49418 695 aa11.75□□□□□ -0.53
PPFIA2-216ENST00000549396 CCDC141Q6ZP82 1450 aa11.75□□□□□ -0.53
PPFIA2-216ENST00000549396 PTMSP20962 102 aa11.75□□□□□ -0.53
PPFIA2-216ENST00000549396 PMFBP1Q8TBY8 1022 aa11.75□□□□□ -0.53
PPFIA2-216ENST00000549396 ARXQ96QS3 562 aa11.75□□□□□ -0.53
PPFIA2-216ENST00000549396 PLB1Q6P1J6 1458 aa11.75□□□□□ -0.53
PPFIA2-216ENST00000549396 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
PPFIA2-216ENST00000549396 RWDD1Q9H446 243 aaPredicted RBP11.74□□□□□ -0.53
PPFIA2-216ENST00000549396 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
PPFIA2-216ENST00000549396 GPATCH3Q96I76 525 aa11.74□□□□□ -0.53
PPFIA2-216ENST00000549396 ZRSR1Q15695 479 aaKnown RBP11.74□□□□□ -0.53
PPFIA2-216ENST00000549396 WASHC2AQ641Q2 1341 aa11.74□□□□□ -0.53
PPFIA2-216ENST00000549396 CENPJQ9HC77 1338 aaPredicted RBP11.74□□□□□ -0.53
PPFIA2-216ENST00000549396 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
PPFIA2-216ENST00000549396 KIAA1107Q9UPP5 1409 aa11.73□□□□□ -0.53
PPFIA2-216ENST00000549396 ANKRD30BQ9BXX2 1392 aa11.73□□□□□ -0.53
PPFIA2-216ENST00000549396 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
PPFIA2-216ENST00000549396 THEMISQ8N1K5 641 aaPredicted RBP11.73□□□□□ -0.53
PPFIA2-216ENST00000549396 CHMP4CQ96CF2 233 aa11.73□□□□□ -0.53
PPFIA2-216ENST00000549396 CNTLNQ9NXG0 1405 aa11.73□□□□□ -0.53
PPFIA2-216ENST00000549396 FOXD1Q16676 465 aa11.72□□□□□ -0.53
PPFIA2-216ENST00000549396 AAMPQ13685 434 aa11.72□□□□□ -0.53
PPFIA2-216ENST00000549396 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
PPFIA2-216ENST00000549396 FRAT1Q92837 279 aaPredicted RBP11.72□□□□□ -0.53
PPFIA2-216ENST00000549396 TEX14Q8IWB6 1497 aa11.71□□□□□ -0.53
PPFIA2-216ENST00000549396 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
PPFIA2-216ENST00000549396 ANO8Q9HCE9 1232 aaPredicted RBP11.69□□□□□ -0.54
PPFIA2-216ENST00000549396 TRAK1Q9UPV9 953 aa11.69□□□□□ -0.54
PPFIA2-216ENST00000549396 PSME1Q06323 249 aa11.68□□□□□ -0.54
PPFIA2-216ENST00000549396 PLEKHG5O94827 1062 aa11.68□□□□□ -0.54
PPFIA2-216ENST00000549396 C1orf141Q5JVX7 400 aa11.68□□□□□ -0.54
PPFIA2-216ENST00000549396 SUPT16HQ9Y5B9 1047 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-216ENST00000549396 ATF3P18847 181 aa11.67□□□□□ -0.54
PPFIA2-216ENST00000549396 RCAN3Q9UKA8 241 aa11.67□□□□□ -0.54
PPFIA2-216ENST00000549396 CD109Q6YHK3 1445 aa11.67□□□□□ -0.54
PPFIA2-216ENST00000549396 GPRASP1Q5JY77 1395 aa11.67□□□□□ -0.54
PPFIA2-216ENST00000549396 KCNJ4P48050 445 aa11.67□□□□□ -0.54
PPFIA2-216ENST00000549396 AKNAQ7Z591 1439 aa11.66□□□□□ -0.54
PPFIA2-216ENST00000549396 E9PSI1 815 aa11.66□□□□□ -0.54
PPFIA2-216ENST00000549396 ST20-MTHFSA0A0A6YYL1 179 aa11.66□□□□□ -0.54
PPFIA2-216ENST00000549396 GOLGA6L6A8MZA4 724 aa11.66□□□□□ -0.54
PPFIA2-216ENST00000549396 LRRFIP1Q32MZ4 808 aaKnown RBP11.65□□□□□ -0.54
PPFIA2-216ENST00000549396 HTATSF1O43719 755 aaKnown RBP11.65□□□□□ -0.54
PPFIA2-216ENST00000549396 FGD1P98174 961 aa11.65□□□□□ -0.54
PPFIA2-216ENST00000549396 KIAA1211Q6ZU35 1233 aa11.65□□□□□ -0.54
PPFIA2-216ENST00000549396 PCF11O94913 1555 aaKnown RBP11.65□□□□□ -0.55
PPFIA2-216ENST00000549396 ITSN2Q9NZM3 1697 aa11.64□□□□□ -0.55
PPFIA2-216ENST00000549396 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
PPFIA2-216ENST00000549396 KIF21AQ7Z4S6 1674 aa11.64□□□□□ -0.55
PPFIA2-216ENST00000549396 PANK3Q9H999 370 aa11.63□□□□□ -0.55
PPFIA2-216ENST00000549396 HSCBQ8IWL3 235 aa11.63□□□□□ -0.55
PPFIA2-216ENST00000549396 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-216ENST00000549396 TCERG1O14776 1098 aaKnown RBP11.63□□□□□ -0.55
PPFIA2-216ENST00000549396 ADGRL1O94910 1474 aa11.62□□□□□ -0.55
PPFIA2-216ENST00000549396 CAMSAP2Q08AD1 1489 aa11.62□□□□□ -0.55
PPFIA2-216ENST00000549396 NRDCO43847 1150 aa11.62□□□□□ -0.55
PPFIA2-216ENST00000549396 DIAPH1O60610 1272 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-216ENST00000549396 HSP90B1P14625 803 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-216ENST00000549396 SMG6Q86US8 1419 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-216ENST00000549396 CCDC9Q9Y3X0 531 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-216ENST00000549396 ATAD2Q6PL18 1390 aa11.62□□□□□ -0.55
PPFIA2-216ENST00000549396 EVA1CP58658 441 aa11.61□□□□□ -0.55
PPFIA2-216ENST00000549396 PTPN23Q9H3S7 1636 aa11.61□□□□□ -0.55
PPFIA2-216ENST00000549396 SOX12O15370 315 aa11.61□□□□□ -0.55
PPFIA2-216ENST00000549396 UGGT2Q9NYU1 1516 aa11.61□□□□□ -0.55
PPFIA2-216ENST00000549396 WDR62O43379 1518 aa11.61□□□□□ -0.55
PPFIA2-216ENST00000549396 SMC4Q9NTJ3 1288 aa11.61□□□□□ -0.55
PPFIA2-216ENST00000549396 HSP90AB1P08238 724 aaKnown RBP11.6□□□□□ -0.55
PPFIA2-216ENST00000549396 ADAMTS12P58397 1594 aa11.6□□□□□ -0.55
PPFIA2-216ENST00000549396 RAPGEF6Q8TEU7 1601 aa11.6□□□□□ -0.55
PPFIA2-216ENST00000549396 BRD4O60885 1362 aaPredicted RBP11.6□□□□□ -0.55
PPFIA2-216ENST00000549396 DDX58O95786 925 aaKnown RBP11.6□□□□□ -0.55
PPFIA2-216ENST00000549396 ANKLE2Q86XL3 938 aa11.6□□□□□ -0.55
PPFIA2-216ENST00000549396 CTTNBP2Q8WZ74 1663 aa11.6□□□□□ -0.55
PPFIA2-216ENST00000549396 CCDC7Q96M83 1385 aa11.59□□□□□ -0.55
PPFIA2-216ENST00000549396 TEFQ10587 303 aa11.59□□□□□ -0.55
PPFIA2-216ENST00000549396 TAF7LQ5H9L4 462 aa11.59□□□□□ -0.55
PPFIA2-216ENST00000549396 CCDC34Q96HJ3 373 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms