RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 ZNF454Q8N9F8 522 aa10.61□□□□□ -0.71
EFCAB2-215ENST00000549220 JPH4Q96JJ6 628 aa10.61□□□□□ -0.71
EFCAB2-215ENST00000549220 NESP48681 1621 aa10.61□□□□□ -0.71
EFCAB2-215ENST00000549220 KIF21AQ7Z4S6 1674 aa10.6□□□□□ -0.71
EFCAB2-215ENST00000549220 SLC4A5Q9BY07 1137 aa10.59□□□□□ -0.71
EFCAB2-215ENST00000549220 ADAM33Q9BZ11 813 aa10.59□□□□□ -0.71
EFCAB2-215ENST00000549220 VPS9D1Q9Y2B5 631 aa10.59□□□□□ -0.71
EFCAB2-215ENST00000549220 PRDM2Q13029 1718 aa10.58□□□□□ -0.72
EFCAB2-215ENST00000549220 BHMG1C9JSJ3 638 aaPredicted RBP10.58□□□□□ -0.72
EFCAB2-215ENST00000549220 KCNK17Q96T54 332 aa10.58□□□□□ -0.72
EFCAB2-215ENST00000549220 PCDHGA10Q9Y5H3 936 aa10.58□□□□□ -0.72
EFCAB2-215ENST00000549220 SUPT5HO00267 1087 aaKnown RBP10.57□□□□□ -0.72
EFCAB2-215ENST00000549220 ZBED2Q9BTP6 218 aa10.56□□□□□ -0.72
EFCAB2-215ENST00000549220 LAMC3Q9Y6N6 1575 aa10.55□□□□□ -0.72
EFCAB2-215ENST00000549220 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
EFCAB2-215ENST00000549220 MAP3K9P80192 1104 aa10.54□□□□□ -0.72
EFCAB2-215ENST00000549220 ZDHHC16Q969W1 377 aa10.54□□□□□ -0.72
EFCAB2-215ENST00000549220 SPRYD3Q8NCJ5 442 aa10.52□□□□□ -0.73
EFCAB2-215ENST00000549220 DPYSL4O14531 572 aa10.51□□□□□ -0.73
EFCAB2-215ENST00000549220 COL9A1P20849 921 aa10.49□□□□□ -0.73
EFCAB2-215ENST00000549220 PTPREP23469 700 aa10.49□□□□□ -0.73
EFCAB2-215ENST00000549220 CCDC88BA6NC98 1476 aa10.49□□□□□ -0.73
EFCAB2-215ENST00000549220 PHF14O94880 888 aa10.48□□□□□ -0.73
EFCAB2-215ENST00000549220 ARIH1Q9Y4X5 557 aaPredicted RBP10.46□□□□□ -0.73
EFCAB2-215ENST00000549220 CADPSQ9ULU8 1353 aa10.45□□□□□ -0.74
EFCAB2-215ENST00000549220 THOC2Q8NI27 1593 aaKnown RBP10.44□□□□□ -0.74
EFCAB2-215ENST00000549220 PDIA6Q15084 440 aa10.44□□□□□ -0.74
EFCAB2-215ENST00000549220 TYW1BQ6NUM6 668 aa10.44□□□□□ -0.74
EFCAB2-215ENST00000549220 PAXIP1Q6ZW49 1069 aaPredicted RBP10.44□□□□□ -0.74
EFCAB2-215ENST00000549220 HCSTQ9UBK5 93 aa10.44□□□□□ -0.74
EFCAB2-215ENST00000549220 PPP1R3GB7ZBB8 358 aa10.43□□□□□ -0.74
EFCAB2-215ENST00000549220 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
EFCAB2-215ENST00000549220 PROX2Q3B8N5 592 aa10.42□□□□□ -0.74
EFCAB2-215ENST00000549220 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
EFCAB2-215ENST00000549220 PDS5BQ9NTI5 1447 aa10.41□□□□□ -0.74
EFCAB2-215ENST00000549220 FBXW7Q969H0 707 aa10.41□□□□□ -0.74
EFCAB2-215ENST00000549220 KCTD12Q96CX2 325 aaKnown RBP10.41□□□□□ -0.74
EFCAB2-215ENST00000549220 C6orf132Q5T0Z8 1188 aa10.4□□□□□ -0.74
EFCAB2-215ENST00000549220 CFTRP13569 1480 aa10.4□□□□□ -0.74
EFCAB2-215ENST00000549220 FANCD2Q9BXW9 1451 aa10.39□□□□□ -0.75
EFCAB2-215ENST00000549220 CEP164Q9UPV0 1460 aa10.39□□□□□ -0.75
EFCAB2-215ENST00000549220 CFAP44Q96MT7 982 aa10.39□□□□□ -0.75
EFCAB2-215ENST00000549220 EPAS1Q99814 870 aa10.39□□□□□ -0.75
EFCAB2-215ENST00000549220 KCNH8Q96L42 1107 aa10.38□□□□□ -0.75
EFCAB2-215ENST00000549220 E2F4Q16254 413 aa10.37□□□□□ -0.75
EFCAB2-215ENST00000549220 THSD4Q6ZMP0 1018 aa10.37□□□□□ -0.75
EFCAB2-215ENST00000549220 DDX12PQ92771 950 aa10.37□□□□□ -0.75
EFCAB2-215ENST00000549220 RABGEF1Q9UJ41 708 aa10.37□□□□□ -0.75
EFCAB2-215ENST00000549220 MRC2Q9UBG0 1479 aa10.35□□□□□ -0.75
EFCAB2-215ENST00000549220 ONECUT3O60422 494 aaPredicted RBP10.34□□□□□ -0.75
EFCAB2-215ENST00000549220 EN1Q05925 392 aaPredicted RBP10.34□□□□□ -0.75
EFCAB2-215ENST00000549220 PLA2G2EQ9NZK7 142 aa10.34□□□□□ -0.75
EFCAB2-215ENST00000549220 SPDYE16A6NNV3 312 aaPredicted RBP10.33□□□□□ -0.76
EFCAB2-215ENST00000549220 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
EFCAB2-215ENST00000549220 CUX2O14529 1486 aa10.32□□□□□ -0.76
EFCAB2-215ENST00000549220 TSHZ2Q9NRE2 1034 aa10.32□□□□□ -0.76
EFCAB2-215ENST00000549220 MRPL50Q8N5N7 158 aaKnown RBP10.31□□□□□ -0.76
EFCAB2-215ENST00000549220 KIAA1468Q9P260 1216 aa10.31□□□□□ -0.76
EFCAB2-215ENST00000549220 FAM198AQ9UFP1 575 aa10.31□□□□□ -0.76
EFCAB2-215ENST00000549220 WDR62O43379 1518 aa10.31□□□□□ -0.76
EFCAB2-215ENST00000549220 C3orf80F5H4A9 247 aa10.3□□□□□ -0.76
EFCAB2-215ENST00000549220 RBM33Q96EV2 1170 aaKnown RBP10.3□□□□□ -0.76
EFCAB2-215ENST00000549220 URB2Q14146 1524 aaKnown RBP10.29□□□□□ -0.76
EFCAB2-215ENST00000549220 TRIM6-TRIM34B2RNG4 842 aa10.29□□□□□ -0.76
EFCAB2-215ENST00000549220 OSBPP22059 807 aa10.29□□□□□ -0.76
EFCAB2-215ENST00000549220 PTPN5P54829 565 aa10.29□□□□□ -0.76
EFCAB2-215ENST00000549220 WNT2BQ93097 391 aa10.29□□□□□ -0.76
EFCAB2-215ENST00000549220 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
EFCAB2-215ENST00000549220 NBR1Q14596 966 aa10.28□□□□□ -0.76
EFCAB2-215ENST00000549220 NBPF3Q9H094 633 aa10.28□□□□□ -0.76
EFCAB2-215ENST00000549220 LAPTM4BQ86VI4 370 aa10.27□□□□□ -0.77
EFCAB2-215ENST00000549220 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
EFCAB2-215ENST00000549220 STAC3Q96MF2 364 aa10.26□□□□□ -0.77
EFCAB2-215ENST00000549220 DNMBPQ6XZF7 1577 aa10.26□□□□□ -0.77
EFCAB2-215ENST00000549220 TOPBP1Q92547 1522 aa10.24□□□□□ -0.77
EFCAB2-215ENST00000549220 ZFRQ96KR1 1074 aaKnown RBP10.24□□□□□ -0.77
EFCAB2-215ENST00000549220 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
EFCAB2-215ENST00000549220 NPDC1Q9NQX5 325 aaPredicted RBP10.23□□□□□ -0.77
EFCAB2-215ENST00000549220 ABCC8Q09428 1581 aa10.22□□□□□ -0.77
EFCAB2-215ENST00000549220 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
EFCAB2-215ENST00000549220 BCAMP50895 628 aa10.22□□□□□ -0.77
EFCAB2-215ENST00000549220 CDHR5Q9HBB8 845 aa10.22□□□□□ -0.77
EFCAB2-215ENST00000549220 MAP3K7O43318 606 aa10.21□□□□□ -0.77
EFCAB2-215ENST00000549220 WDR70Q9NW82 654 aa10.21□□□□□ -0.77
EFCAB2-215ENST00000549220 GRXCR2A6NFK2 248 aa10.2□□□□□ -0.78
EFCAB2-215ENST00000549220 TTC13Q8NBP0 860 aa10.2□□□□□ -0.78
EFCAB2-215ENST00000549220 KCNV2Q8TDN2 545 aa10.2□□□□□ -0.78
EFCAB2-215ENST00000549220 CUX1P39880 1505 aa10.19□□□□□ -0.78
EFCAB2-215ENST00000549220 PRSS12P56730 875 aa10.19□□□□□ -0.78
EFCAB2-215ENST00000549220 FAM98CQ17RN3 349 aaKnown RBP10.19□□□□□ -0.78
EFCAB2-215ENST00000549220 CDCA7LQ96GN5 454 aa10.19□□□□□ -0.78
EFCAB2-215ENST00000549220 GOLGA8CPA6NN73 597 aa10.18□□□□□ -0.78
EFCAB2-215ENST00000549220 ANKK1Q8NFD2 765 aa10.18□□□□□ -0.78
EFCAB2-215ENST00000549220 ITGBL1O95965 494 aaPredicted RBP10.17□□□□□ -0.78
EFCAB2-215ENST00000549220 WBP1LQ9NX94 342 aa10.17□□□□□ -0.78
EFCAB2-215ENST00000549220 BIVM-ERCC5R4GMW8 1640 aa10.17□□□□□ -0.78
EFCAB2-215ENST00000549220 MLLT3P42568 568 aaPredicted RBP10.16□□□□□ -0.78
EFCAB2-215ENST00000549220 SYNJ1O43426 1573 aa10.16□□□□□ -0.78
EFCAB2-215ENST00000549220 FGD5Q6ZNL6 1462 aa10.16□□□□□ -0.78
EFCAB2-215ENST00000549220 TARBP1Q13395 1621 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms