RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 OXER1Q8TDS5 423 aa5.8□□□□□ -1.48
DEPDC4-206ENST00000549100 NFX1Q12986 1120 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-206ENST00000549100 TRIM41Q8WV44 630 aa5.79□□□□□ -1.48
DEPDC4-206ENST00000549100 UPF1Q92900 1129 aaKnown RBP eCLIP5.79□□□□□ -1.48
DEPDC4-206ENST00000549100 ST8SIA5O15466 376 aa5.78□□□□□ -1.48
DEPDC4-206ENST00000549100 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-206ENST00000549100 HPS5Q9UPZ3 1129 aa5.78□□□□□ -1.48
DEPDC4-206ENST00000549100 PKDCCQ504Y2 493 aa5.77□□□□□ -1.49
DEPDC4-206ENST00000549100 LAPTM4BQ86VI4 370 aa5.77□□□□□ -1.49
DEPDC4-206ENST00000549100 ZNF516Q92618 1163 aa5.77□□□□□ -1.49
DEPDC4-206ENST00000549100 ZDHHC16Q969W1 377 aa5.77□□□□□ -1.49
DEPDC4-206ENST00000549100 KIAA1468Q9P260 1216 aa5.77□□□□□ -1.49
DEPDC4-206ENST00000549100 SEPT9Q9UHD8 586 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-206ENST00000549100 TSR3Q9UJK0 312 aaKnown RBP5.77□□□□□ -1.49
DEPDC4-206ENST00000549100 STK24Q9Y6E0 443 aa5.77□□□□□ -1.49
DEPDC4-206ENST00000549100 DGAT1O75907 488 aa5.76□□□□□ -1.49
DEPDC4-206ENST00000549100 GPHNQ9NQX3 736 aaPredicted RBP5.76□□□□□ -1.49
DEPDC4-206ENST00000549100 INSM1Q01101 510 aaPredicted RBP5.75□□□□□ -1.49
DEPDC4-206ENST00000549100 NKX2-3Q8TAU0 364 aa5.75□□□□□ -1.49
DEPDC4-206ENST00000549100 EMID1Q96A84 441 aaPredicted RBP5.75□□□□□ -1.49
DEPDC4-206ENST00000549100 ANO8Q9HCE9 1232 aaPredicted RBP5.74□□□□□ -1.49
DEPDC4-206ENST00000549100 DACH1Q9UI36 760 aa5.74□□□□□ -1.49
DEPDC4-206ENST00000549100 PPP1R3GB7ZBB8 358 aa5.73□□□□□ -1.49
DEPDC4-206ENST00000549100 JPH4Q96JJ6 628 aa5.73□□□□□ -1.49
DEPDC4-206ENST00000549100 MTRQ99707 1265 aa5.73□□□□□ -1.49
DEPDC4-206ENST00000549100 AAASQ9NRG9 546 aa5.73□□□□□ -1.49
DEPDC4-206ENST00000549100 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.73□□□□□ -1.49
DEPDC4-206ENST00000549100 FAM187AA6NFU0 413 aa5.69□□□□□ -1.5
DEPDC4-206ENST00000549100 LRCH3Q96II8 777 aa5.69□□□□□ -1.5
DEPDC4-206ENST00000549100 IL21Q9HBE4 155 aa5.69□□□□□ -1.5
DEPDC4-206ENST00000549100 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-206ENST00000549100 FAM98CQ17RN3 349 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-206ENST00000549100 RTN4Q9NQC3 1192 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-206ENST00000549100 GMPR2Q9P2T1 348 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-206ENST00000549100 EVI5O60447 810 aa5.66□□□□□ -1.5
DEPDC4-206ENST00000549100 PPP4CP60510 307 aa5.66□□□□□ -1.5
DEPDC4-206ENST00000549100 PCDHGA10Q9Y5H3 936 aa5.66□□□□□ -1.5
DEPDC4-206ENST00000549100 STK25O00506 426 aa5.65□□□□□ -1.5
DEPDC4-206ENST00000549100 PRR20EP86478 221 aa5.65□□□□□ -1.5
DEPDC4-206ENST00000549100 PRR20CP86479 221 aa5.65□□□□□ -1.5
DEPDC4-206ENST00000549100 PRR20DP86480 221 aa5.65□□□□□ -1.5
DEPDC4-206ENST00000549100 PRR20BP86481 221 aa5.65□□□□□ -1.5
DEPDC4-206ENST00000549100 PRR20AP86496 221 aa5.65□□□□□ -1.5
DEPDC4-206ENST00000549100 TNFRSF10AO00220 468 aa5.64□□□□□ -1.51
DEPDC4-206ENST00000549100 SLC19A1P41440 591 aa5.64□□□□□ -1.51
DEPDC4-206ENST00000549100 C11orf95C9JLR9 678 aaPredicted RBP5.63□□□□□ -1.51
DEPDC4-206ENST00000549100 GDF9O60383 454 aa5.63□□□□□ -1.51
DEPDC4-206ENST00000549100 AMER1Q5JTC6 1135 aaPredicted RBP5.63□□□□□ -1.51
DEPDC4-206ENST00000549100 SPRYD7Q5W111 196 aa5.63□□□□□ -1.51
DEPDC4-206ENST00000549100 ONECUT3O60422 494 aaPredicted RBP5.62□□□□□ -1.51
DEPDC4-206ENST00000549100 ZNF598Q86UK7 904 aaKnown RBP5.62□□□□□ -1.51
DEPDC4-206ENST00000549100 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
DEPDC4-206ENST00000549100 TRIM6-TRIM34B2RNG4 842 aa5.6□□□□□ -1.51
DEPDC4-206ENST00000549100 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
DEPDC4-206ENST00000549100 RNF223E7ERA6 249 aa5.59□□□□□ -1.51
DEPDC4-206ENST00000549100 TERTO14746 1132 aaKnown RBP5.59□□□□□ -1.51
DEPDC4-206ENST00000549100 APLP1P51693 650 aa5.59□□□□□ -1.51
DEPDC4-206ENST00000549100 LIAT1Q6ZQX7 453 aa5.59□□□□□ -1.51
DEPDC4-206ENST00000549100 TMUB1Q9BVT8 246 aa5.59□□□□□ -1.51
DEPDC4-206ENST00000549100 SAMD7Q7Z3H4 446 aa5.58□□□□□ -1.52
DEPDC4-206ENST00000549100 XP32Q5T750 250 aa5.57□□□□□ -1.52
DEPDC4-206ENST00000549100 ZNF697Q5TEC3 545 aa5.57□□□□□ -1.52
DEPDC4-206ENST00000549100 KCTD17Q8N5Z5 321 aa5.57□□□□□ -1.52
DEPDC4-206ENST00000549100 SNRPBP14678 240 aaKnown RBP5.56□□□□□ -1.52
DEPDC4-206ENST00000549100 GGCXP38435 758 aa5.56□□□□□ -1.52
DEPDC4-206ENST00000549100 CRIPAKQ8N1N5 446 aa5.56□□□□□ -1.52
DEPDC4-206ENST00000549100 PPEF1O14829 653 aaPredicted RBP5.55□□□□□ -1.52
DEPDC4-206ENST00000549100 COPS2P61201 443 aa5.55□□□□□ -1.52
DEPDC4-206ENST00000549100 C6orf132Q5T0Z8 1188 aa5.55□□□□□ -1.52
DEPDC4-206ENST00000549100 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
DEPDC4-206ENST00000549100 TSKSQ9UJT2 592 aa5.55□□□□□ -1.52
DEPDC4-206ENST00000549100 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
DEPDC4-206ENST00000549100 FAM181BA6NEQ2 426 aa5.54□□□□□ -1.52
DEPDC4-206ENST00000549100 C3orf80F5H4A9 247 aa5.54□□□□□ -1.52
DEPDC4-206ENST00000549100 SMAPO00193 183 aa5.54□□□□□ -1.52
DEPDC4-206ENST00000549100 PPP1R15BQ5SWA1 713 aa5.54□□□□□ -1.52
DEPDC4-206ENST00000549100 ZSCAN1Q8NBB4 408 aa5.54□□□□□ -1.52
DEPDC4-206ENST00000549100 GSK3AP49840 483 aa5.53□□□□□ -1.52
DEPDC4-206ENST00000549100 TYW1BQ6NUM6 668 aa5.53□□□□□ -1.52
DEPDC4-206ENST00000549100 CRISPLD2Q9H0B8 497 aa5.53□□□□□ -1.52
DEPDC4-206ENST00000549100 TAOK2Q9UL54 1235 aa5.52□□□□□ -1.53
DEPDC4-206ENST00000549100 AVPP01185 164 aa5.51□□□□□ -1.53
DEPDC4-206ENST00000549100 GMPRP36959 345 aa5.51□□□□□ -1.53
DEPDC4-206ENST00000549100 FBXW7Q969H0 707 aa5.51□□□□□ -1.53
DEPDC4-206ENST00000549100 PKD2L1Q9P0L9 805 aa5.51□□□□□ -1.53
DEPDC4-206ENST00000549100 AXIN1O15169 862 aa5.5□□□□□ -1.53
DEPDC4-206ENST00000549100 ZPR1O75312 459 aa5.5□□□□□ -1.53
DEPDC4-206ENST00000549100 PHF14O94880 888 aa5.5□□□□□ -1.53
DEPDC4-206ENST00000549100 MAP3K9P80192 1104 aa5.49□□□□□ -1.53
DEPDC4-206ENST00000549100 PLA2G2CQ5R387 149 aa5.48□□□□□ -1.53
DEPDC4-206ENST00000549100 FAM198AQ9UFP1 575 aa5.48□□□□□ -1.53
DEPDC4-206ENST00000549100 NCKAP5LQ9HCH0 1330 aa5.48□□□□□ -1.53
DEPDC4-206ENST00000549100 FOXC1Q12948 553 aa5.47□□□□□ -1.53
DEPDC4-206ENST00000549100 RBM33Q96EV2 1170 aaKnown RBP5.47□□□□□ -1.53
DEPDC4-206ENST00000549100 EMILIN3Q9NT22 766 aa5.47□□□□□ -1.53
DEPDC4-206ENST00000549100 PACS2Q86VP3 889 aa5.46□□□□□ -1.54
DEPDC4-206ENST00000549100 KRTAP1-3Q8IUG1 177 aa5.46□□□□□ -1.54
DEPDC4-206ENST00000549100 ANKLE1Q8NAG6 615 aa5.46□□□□□ -1.54
DEPDC4-206ENST00000549100 TLL1O43897 1013 aa5.45□□□□□ -1.54
DEPDC4-206ENST00000549100 RNF40O75150 1001 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms