RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SYNJ2O15056 1496 aa18.96■□□□□ 0.63
RAPGEF3-218ENST00000548919 MAGI1Q96QZ7 1491 aaPredicted RBP18.96■□□□□ 0.63
RAPGEF3-218ENST00000548919 RALBP1Q15311 655 aa18.96■□□□□ 0.63
RAPGEF3-218ENST00000548919 ATP10BO94823 1461 aa18.96■□□□□ 0.63
RAPGEF3-218ENST00000548919 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
RAPGEF3-218ENST00000548919 EXOC6Q8TAG9 804 aa18.95■□□□□ 0.62
RAPGEF3-218ENST00000548919 ANP32AP39687 249 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-218ENST00000548919 RRP1P56182 461 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-218ENST00000548919 RGL3Q3MIN7 710 aa18.94■□□□□ 0.62
RAPGEF3-218ENST00000548919 KDM5DQ9BY66 1539 aa18.93■□□□□ 0.62
RAPGEF3-218ENST00000548919 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
RAPGEF3-218ENST00000548919 IPO9Q96P70 1041 aaKnown RBP18.93■□□□□ 0.62
RAPGEF3-218ENST00000548919 E9PCH4 1651 aa18.92■□□□□ 0.62
RAPGEF3-218ENST00000548919 ABCA8O94911 1581 aa18.91■□□□□ 0.62
RAPGEF3-218ENST00000548919 RCAN3Q9UKA8 241 aa18.91■□□□□ 0.62
RAPGEF3-218ENST00000548919 PTPRGP23470 1445 aa18.9■□□□□ 0.62
RAPGEF3-218ENST00000548919 CDCA7LQ96GN5 454 aa18.89■□□□□ 0.62
RAPGEF3-218ENST00000548919 NLRP13Q86W25 1043 aa18.89■□□□□ 0.61
RAPGEF3-218ENST00000548919 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.61
RAPGEF3-218ENST00000548919 KTN1Q86UP2 1357 aaKnown RBP18.89■□□□□ 0.61
RAPGEF3-218ENST00000548919 NUP160Q12769 1436 aa18.89■□□□□ 0.61
RAPGEF3-218ENST00000548919 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
RAPGEF3-218ENST00000548919 FAM135AQ9P2D6 1515 aa18.88■□□□□ 0.61
RAPGEF3-218ENST00000548919 CC2D1BQ5T0F9 858 aaKnown RBP18.87■□□□□ 0.61
RAPGEF3-218ENST00000548919 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
RAPGEF3-218ENST00000548919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.61
RAPGEF3-218ENST00000548919 ZBTB47Q9UFB7 747 aaPredicted RBP18.87■□□□□ 0.61
RAPGEF3-218ENST00000548919 PARD3Q8TEW0 1356 aa18.87■□□□□ 0.61
RAPGEF3-218ENST00000548919 PRAG1Q86YV5 1406 aa18.87■□□□□ 0.61
RAPGEF3-218ENST00000548919 PER1O15534 1290 aaPredicted RBP18.86■□□□□ 0.61
RAPGEF3-218ENST00000548919 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
RAPGEF3-218ENST00000548919 CCDC144AA2RUR9 1427 aa18.85■□□□□ 0.61
RAPGEF3-218ENST00000548919 PLIN1O60240 522 aa18.84■□□□□ 0.61
RAPGEF3-218ENST00000548919 SAMD9LQ8IVG5 1584 aa18.83■□□□□ 0.61
RAPGEF3-218ENST00000548919 ARHGEF5Q12774 1597 aa18.83■□□□□ 0.6
RAPGEF3-218ENST00000548919 DISP3Q9P2K9 1392 aa18.82■□□□□ 0.6
RAPGEF3-218ENST00000548919 CCDC141Q6ZP82 1450 aa18.82■□□□□ 0.6
RAPGEF3-218ENST00000548919 CDC42BPBQ9Y5S2 1711 aa18.81■□□□□ 0.6
RAPGEF3-218ENST00000548919 PLA2R1Q13018 1463 aa18.8■□□□□ 0.6
RAPGEF3-218ENST00000548919 SKAP1Q86WV1 359 aa18.8■□□□□ 0.6
RAPGEF3-218ENST00000548919 PANK3Q9H999 370 aa18.8■□□□□ 0.6
RAPGEF3-218ENST00000548919 A2MP01023 1474 aa18.79■□□□□ 0.6
RAPGEF3-218ENST00000548919 TESK2Q96S53 571 aa18.79■□□□□ 0.6
RAPGEF3-218ENST00000548919 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
RAPGEF3-218ENST00000548919 PDE4AP27815 886 aa18.78■□□□□ 0.6
RAPGEF3-218ENST00000548919 TCERG1O14776 1098 aaKnown RBP18.77■□□□□ 0.6
RAPGEF3-218ENST00000548919 COL17A1Q9UMD9 1497 aaPredicted RBP18.77■□□□□ 0.59
RAPGEF3-218ENST00000548919 SYCP2Q9BX26 1530 aa18.76■□□□□ 0.59
RAPGEF3-218ENST00000548919 PREX2Q70Z35 1606 aa18.75■□□□□ 0.59
RAPGEF3-218ENST00000548919 GPRASP1Q5JY77 1395 aa18.74■□□□□ 0.59
RAPGEF3-218ENST00000548919 RTL5Q5HYW3 569 aaPredicted RBP18.74■□□□□ 0.59
RAPGEF3-218ENST00000548919 CRBNQ96SW2 442 aa18.73■□□□□ 0.59
RAPGEF3-218ENST00000548919 BACH2Q9BYV9 841 aa18.73■□□□□ 0.59
RAPGEF3-218ENST00000548919 ERBINQ96RT1 1412 aa18.73■□□□□ 0.59
RAPGEF3-218ENST00000548919 PRDM15P57071 1507 aaPredicted RBP18.73■□□□□ 0.59
RAPGEF3-218ENST00000548919 MYO5CQ9NQX4 1742 aa18.72■□□□□ 0.59
RAPGEF3-218ENST00000548919 PLEKHH2Q8IVE3 1493 aa18.71■□□□□ 0.59
RAPGEF3-218ENST00000548919 LAS1LQ9Y4W2 734 aaKnown RBP18.71■□□□□ 0.59
RAPGEF3-218ENST00000548919 BLMP54132 1417 aaPredicted RBP18.71■□□□□ 0.59
RAPGEF3-218ENST00000548919 ARHGAP5Q13017 1502 aa18.71■□□□□ 0.59
RAPGEF3-218ENST00000548919 RSPH4AQ5TD94 716 aa18.7■□□□□ 0.58
RAPGEF3-218ENST00000548919 TMF1P82094 1093 aa18.7■□□□□ 0.58
RAPGEF3-218ENST00000548919 C20orf194Q5TEA3 1177 aa18.7■□□□□ 0.58
RAPGEF3-218ENST00000548919 ADAMTS8Q9UP79 889 aa18.7■□□□□ 0.58
RAPGEF3-218ENST00000548919 UNC13BO14795 1591 aa18.69■□□□□ 0.58
RAPGEF3-218ENST00000548919 TTC37Q6PGP7 1564 aa18.69■□□□□ 0.58
RAPGEF3-218ENST00000548919 WASHC2CQ9Y4E1 1318 aa18.69■□□□□ 0.58
RAPGEF3-218ENST00000548919 MS4A1P11836 297 aa18.67■□□□□ 0.58
RAPGEF3-218ENST00000548919 LAMC1P11047 1609 aa18.66■□□□□ 0.58
RAPGEF3-218ENST00000548919 IQGAP3Q86VI3 1631 aa18.65■□□□□ 0.58
RAPGEF3-218ENST00000548919 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.64■□□□□ 0.57
RAPGEF3-218ENST00000548919 ZMYM4Q5VZL5 1548 aa18.64■□□□□ 0.57
RAPGEF3-218ENST00000548919 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
RAPGEF3-218ENST00000548919 MAST1Q9Y2H9 1570 aa18.62■□□□□ 0.57
RAPGEF3-218ENST00000548919 MAGI2Q86UL8 1455 aa18.62■□□□□ 0.57
RAPGEF3-218ENST00000548919 NEFMP07197 916 aa18.62■□□□□ 0.57
RAPGEF3-218ENST00000548919 PLEKHH1Q9ULM0 1364 aa18.61■□□□□ 0.57
RAPGEF3-218ENST00000548919 PPP2R1AP30153 589 aa18.61■□□□□ 0.57
RAPGEF3-218ENST00000548919 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
RAPGEF3-218ENST00000548919 INSRP06213 1382 aa18.6■□□□□ 0.57
RAPGEF3-218ENST00000548919 WDR7Q9Y4E6 1490 aa18.6■□□□□ 0.57
RAPGEF3-218ENST00000548919 PLXNC1O60486 1568 aa18.59■□□□□ 0.57
RAPGEF3-218ENST00000548919 WDR43Q15061 677 aaKnown RBP eCLIP18.59■□□□□ 0.57
RAPGEF3-218ENST00000548919 DUSP27Q5VZP5 1158 aa18.58■□□□□ 0.56
RAPGEF3-218ENST00000548919 RNF17Q9BXT8 1623 aaKnown RBP18.57■□□□□ 0.56
RAPGEF3-218ENST00000548919 DUOX2Q9NRD8 1548 aa18.57■□□□□ 0.56
RAPGEF3-218ENST00000548919 AMER1Q5JTC6 1135 aaPredicted RBP18.56■□□□□ 0.56
RAPGEF3-218ENST00000548919 ATP10AO60312 1499 aa18.56■□□□□ 0.56
RAPGEF3-218ENST00000548919 KDM2BQ8NHM5 1336 aa18.55■□□□□ 0.56
RAPGEF3-218ENST00000548919 CCDC146Q8IYE0 955 aa18.55■□□□□ 0.56
RAPGEF3-218ENST00000548919 SLC4A3P48751 1232 aa18.54■□□□□ 0.56
RAPGEF3-218ENST00000548919 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
RAPGEF3-218ENST00000548919 GOLGA2Q08379 1002 aa18.52■□□□□ 0.56
RAPGEF3-218ENST00000548919 MADDQ8WXG6 1647 aa18.52■□□□□ 0.56
RAPGEF3-218ENST00000548919 ZNF521Q96K83 1311 aa18.52■□□□□ 0.55
RAPGEF3-218ENST00000548919 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
RAPGEF3-218ENST00000548919 SPINK5Q9NQ38 1064 aaPredicted RBP18.5■□□□□ 0.55
RAPGEF3-218ENST00000548919 TRAPPC8Q9Y2L5 1435 aa18.5■□□□□ 0.55
RAPGEF3-218ENST00000548919 CHD1O14646 1710 aa18.49■□□□□ 0.55
RAPGEF3-218ENST00000548919 CENPQQ7L2Z9 268 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms