RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 CHMP7Q8WUX9 453 aaPredicted RBP13.26□□□□□ -0.29
SMARCD1-205ENST00000548573 TSPY4P0CV99 314 aa13.25□□□□□ -0.29
SMARCD1-205ENST00000548573 TSPY10P0CW01 314 aa13.25□□□□□ -0.29
SMARCD1-205ENST00000548573 ANP32AP39687 249 aaKnown RBP13.25□□□□□ -0.29
SMARCD1-205ENST00000548573 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
SMARCD1-205ENST00000548573 ATP10BO94823 1461 aa13.25□□□□□ -0.29
SMARCD1-205ENST00000548573 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
SMARCD1-205ENST00000548573 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
SMARCD1-205ENST00000548573 TRPM1Q7Z4N2 1603 aa13.22□□□□□ -0.29
SMARCD1-205ENST00000548573 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
SMARCD1-205ENST00000548573 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
SMARCD1-205ENST00000548573 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
SMARCD1-205ENST00000548573 NLRP13Q86W25 1043 aa13.22□□□□□ -0.29
SMARCD1-205ENST00000548573 FAM135AQ9P2D6 1515 aa13.21□□□□□ -0.29
SMARCD1-205ENST00000548573 INSRP06213 1382 aa13.21□□□□□ -0.29
SMARCD1-205ENST00000548573 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.29
SMARCD1-205ENST00000548573 KDM2AQ9Y2K7 1162 aa13.21□□□□□ -0.29
SMARCD1-205ENST00000548573 PRAG1Q86YV5 1406 aa13.21□□□□□ -0.3
SMARCD1-205ENST00000548573 LAMC1P11047 1609 aa13.21□□□□□ -0.3
SMARCD1-205ENST00000548573 DEKP35659 375 aaKnown RBP13.2□□□□□ -0.3
SMARCD1-205ENST00000548573 CCDC141Q6ZP82 1450 aa13.2□□□□□ -0.3
SMARCD1-205ENST00000548573 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
SMARCD1-205ENST00000548573 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
SMARCD1-205ENST00000548573 WASHC2CQ9Y4E1 1318 aa13.19□□□□□ -0.3
SMARCD1-205ENST00000548573 GPRASP1Q5JY77 1395 aa13.19□□□□□ -0.3
SMARCD1-205ENST00000548573 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
SMARCD1-205ENST00000548573 ERCC6Q03468 1493 aa13.18□□□□□ -0.3
SMARCD1-205ENST00000548573 CCDC144AA2RUR9 1427 aa13.18□□□□□ -0.3
SMARCD1-205ENST00000548573 TCERG1O14776 1098 aaKnown RBP13.17□□□□□ -0.3
SMARCD1-205ENST00000548573 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
SMARCD1-205ENST00000548573 SAMD9LQ8IVG5 1584 aa13.17□□□□□ -0.3
SMARCD1-205ENST00000548573 PREX2Q70Z35 1606 aa13.17□□□□□ -0.3
SMARCD1-205ENST00000548573 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
SMARCD1-205ENST00000548573 HNRNPMP52272 730 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMARCD1-205ENST00000548573 UNC13BO14795 1591 aa13.17□□□□□ -0.3
SMARCD1-205ENST00000548573 COL17A1Q9UMD9 1497 aaPredicted RBP13.16□□□□□ -0.3
SMARCD1-205ENST00000548573 MAST1Q9Y2H9 1570 aa13.16□□□□□ -0.3
SMARCD1-205ENST00000548573 CDC42BPBQ9Y5S2 1711 aa13.16□□□□□ -0.3
SMARCD1-205ENST00000548573 PRDM15P57071 1507 aaPredicted RBP13.16□□□□□ -0.3
SMARCD1-205ENST00000548573 FBLN2P98095 1184 aa13.16□□□□□ -0.3
SMARCD1-205ENST00000548573 EXOC6Q8TAG9 804 aa13.16□□□□□ -0.3
SMARCD1-205ENST00000548573 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
SMARCD1-205ENST00000548573 EIF2AK4Q9P2K8 1649 aaKnown RBP13.14□□□□□ -0.31
SMARCD1-205ENST00000548573 BLMP54132 1417 aaPredicted RBP13.14□□□□□ -0.31
SMARCD1-205ENST00000548573 MS4A1P11836 297 aa13.14□□□□□ -0.31
SMARCD1-205ENST00000548573 NBR1Q14596 966 aa13.14□□□□□ -0.31
SMARCD1-205ENST00000548573 A2MP01023 1474 aa13.13□□□□□ -0.31
SMARCD1-205ENST00000548573 PLEKHH2Q8IVE3 1493 aa13.13□□□□□ -0.31
SMARCD1-205ENST00000548573 PLA2R1Q13018 1463 aa13.12□□□□□ -0.31
SMARCD1-205ENST00000548573 IQGAP3Q86VI3 1631 aa13.11□□□□□ -0.31
SMARCD1-205ENST00000548573 ATP10AO60312 1499 aa13.11□□□□□ -0.31
SMARCD1-205ENST00000548573 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
SMARCD1-205ENST00000548573 TESK2Q96S53 571 aa13.11□□□□□ -0.31
SMARCD1-205ENST00000548573 PLXNC1O60486 1568 aa13.1□□□□□ -0.31
SMARCD1-205ENST00000548573 MYO5CQ9NQX4 1742 aa13.1□□□□□ -0.31
SMARCD1-205ENST00000548573 ERBINQ96RT1 1412 aa13.1□□□□□ -0.31
SMARCD1-205ENST00000548573 PDE4AP27815 886 aa13.09□□□□□ -0.31
SMARCD1-205ENST00000548573 RTL5Q5HYW3 569 aaPredicted RBP13.09□□□□□ -0.31
SMARCD1-205ENST00000548573 BACH2Q9BYV9 841 aa13.09□□□□□ -0.31
SMARCD1-205ENST00000548573 DISP3Q9P2K9 1392 aa13.09□□□□□ -0.31
SMARCD1-205ENST00000548573 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.31
SMARCD1-205ENST00000548573 RGL3Q3MIN7 710 aa13.08□□□□□ -0.32
SMARCD1-205ENST00000548573 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
SMARCD1-205ENST00000548573 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
SMARCD1-205ENST00000548573 MAGI2Q86UL8 1455 aa13.07□□□□□ -0.32
SMARCD1-205ENST00000548573 RNF17Q9BXT8 1623 aaKnown RBP13.07□□□□□ -0.32
SMARCD1-205ENST00000548573 TMF1P82094 1093 aa13.07□□□□□ -0.32
SMARCD1-205ENST00000548573 PANK3Q9H999 370 aa13.06□□□□□ -0.32
SMARCD1-205ENST00000548573 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
SMARCD1-205ENST00000548573 ARHGAP5Q13017 1502 aa13.05□□□□□ -0.32
SMARCD1-205ENST00000548573 DUOX2Q9NRD8 1548 aa13.05□□□□□ -0.32
SMARCD1-205ENST00000548573 TTC37Q6PGP7 1564 aa13.04□□□□□ -0.32
SMARCD1-205ENST00000548573 USP35Q9P2H5 1018 aa13.04□□□□□ -0.32
SMARCD1-205ENST00000548573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMARCD1-205ENST00000548573 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
SMARCD1-205ENST00000548573 CRBNQ96SW2 442 aa13.02□□□□□ -0.33
SMARCD1-205ENST00000548573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.334e-7■■□□□ 13.9
SMARCD1-205ENST00000548573 WDR7Q9Y4E6 1490 aa13.01□□□□□ -0.33
SMARCD1-205ENST00000548573 PLIN1O60240 522 aa13□□□□□ -0.33
SMARCD1-205ENST00000548573 IQGAP1P46940 1657 aa13□□□□□ -0.33
SMARCD1-205ENST00000548573 DDRGK1Q96HY6 314 aa13□□□□□ -0.33
SMARCD1-205ENST00000548573 CLASP1Q7Z460 1538 aa12.99□□□□□ -0.33
SMARCD1-205ENST00000548573 PPM1GO15355 546 aaPredicted RBP12.99□□□□□ -0.33
SMARCD1-205ENST00000548573 ADAMTS8Q9UP79 889 aa12.99□□□□□ -0.33
SMARCD1-205ENST00000548573 MADDQ8WXG6 1647 aa12.99□□□□□ -0.33
SMARCD1-205ENST00000548573 SYNMO15061 1565 aa12.98□□□□□ -0.33
SMARCD1-205ENST00000548573 KDM2BQ8NHM5 1336 aa12.98□□□□□ -0.33
SMARCD1-205ENST00000548573 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
SMARCD1-205ENST00000548573 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
SMARCD1-205ENST00000548573 CDCA8Q53HL2 280 aa12.97□□□□□ -0.33
SMARCD1-205ENST00000548573 SHROOM2Q13796 1616 aa12.97□□□□□ -0.33
SMARCD1-205ENST00000548573 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
SMARCD1-205ENST00000548573 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
SMARCD1-205ENST00000548573 ABCC2Q92887 1545 aa12.96□□□□□ -0.33
SMARCD1-205ENST00000548573 DUSP27Q5VZP5 1158 aa12.96□□□□□ -0.33
SMARCD1-205ENST00000548573 CENPQQ7L2Z9 268 aaPredicted RBP12.96□□□□□ -0.33
SMARCD1-205ENST00000548573 PIK3C2GO75747 1445 aa12.96□□□□□ -0.34
SMARCD1-205ENST00000548573 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.34
SMARCD1-205ENST00000548573 NEFMP07197 916 aa12.95□□□□□ -0.34
SMARCD1-205ENST00000548573 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms