RNA–Protein interactions for RNA: ENST00000548025.5

MARF1-205, Transcript of meiosis regulator and mRNA stability factor 1, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARF1, Length 5,891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARF1-205	ENST00000548025	DHX57	Q6P158	1386 aa	Known RBP	13.63	□□□□□ -0.23
MARF1-205	ENST00000548025	TEF	Q10587	303 aa		13.63	□□□□□ -0.23
MARF1-205	ENST00000548025	STAC3	Q96MF2	364 aa		13.63	□□□□□ -0.23
MARF1-205	ENST00000548025	GPATCH3	Q96I76	525 aa		13.63	□□□□□ -0.23
MARF1-205	ENST00000548025	SMG6	Q86US8	1419 aa	Known RBP	13.62	□□□□□ -0.23
MARF1-205	ENST00000548025	NLRP2	Q9NX02	1062 aa		13.61	□□□□□ -0.23
MARF1-205	ENST00000548025	ARHGAP5	Q13017	1502 aa		13.6	□□□□□ -0.23
MARF1-205	ENST00000548025	VPS37D	Q86XT2	251 aa		13.6	□□□□□ -0.23
MARF1-205	ENST00000548025	FGD5	Q6ZNL6	1462 aa		13.6	□□□□□ -0.23
MARF1-205	ENST00000548025	STRN4	Q9NRL3	753 aa		13.6	□□□□□ -0.23
MARF1-205	ENST00000548025	SALL2	Q9Y467	1007 aa	Predicted RBP	13.6	□□□□□ -0.23
MARF1-205	ENST00000548025	FAM9B	Q8IZU0	186 aa		13.59	□□□□□ -0.23
MARF1-205	ENST00000548025	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.59	□□□□□ -0.23
MARF1-205	ENST00000548025	BEGAIN	Q9BUH8	593 aa		13.58	□□□□□ -0.23
MARF1-205	ENST00000548025	ROCK1	Q13464	1354 aa		13.58	□□□□□ -0.24
MARF1-205	ENST00000548025	NEXN	Q0ZGT2	675 aa		13.57	□□□□□ -0.24
MARF1-205	ENST00000548025	MRS2	Q9HD23	443 aa		13.57	□□□□□ -0.24
MARF1-205	ENST00000548025	PHLDB1	Q86UU1	1377 aa		13.57	□□□□□ -0.24
MARF1-205	ENST00000548025	DNAJC5B	Q9UF47	199 aa		13.57	□□□□□ -0.24
MARF1-205	ENST00000548025	HMGXB3	Q12766	1538 aa		13.57	□□□□□ -0.24
MARF1-205	ENST00000548025	SNAPC4	Q5SXM2	1469 aa		13.56	□□□□□ -0.24
MARF1-205	ENST00000548025	PLB1	Q6P1J6	1458 aa		13.56	□□□□□ -0.24
MARF1-205	ENST00000548025	CD109	Q6YHK3	1445 aa		13.56	□□□□□ -0.24
MARF1-205	ENST00000548025	MSH6	P52701	1360 aa		13.56	□□□□□ -0.24
MARF1-205	ENST00000548025	NCBP3	Q53F19	620 aa	Known RBP	13.55	□□□□□ -0.24
MARF1-205	ENST00000548025	TOM1L2	Q6ZVM7	507 aa		13.55	□□□□□ -0.24
MARF1-205	ENST00000548025	PRDM11	Q9NQV5	511 aa		13.55	□□□□□ -0.24
MARF1-205	ENST00000548025	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.55	□□□□□ -0.24
MARF1-205	ENST00000548025	MIA2	Q96PC5	1412 aa		13.55	□□□□□ -0.24
MARF1-205	ENST00000548025	IPO8	O15397	1037 aa	Known RBP	13.55	□□□□□ -0.24
MARF1-205	ENST00000548025	ROCK2	O75116	1388 aa	Known RBP	13.55	□□□□□ -0.24
MARF1-205	ENST00000548025	NEUROD2	Q15784	382 aa		13.54	□□□□□ -0.24
MARF1-205	ENST00000548025	DDX58	O95786	925 aa	Known RBP	13.54	□□□□□ -0.24
MARF1-205	ENST00000548025	PRDM2	Q13029	1718 aa		13.54	□□□□□ -0.24
MARF1-205	ENST00000548025	LMTK3	Q96Q04	1460 aa		13.54	□□□□□ -0.24
MARF1-205	ENST00000548025	NLRP13	Q86W25	1043 aa		13.54	□□□□□ -0.24
MARF1-205	ENST00000548025	TAT	P17735	454 aa	Predicted RBP	13.53	□□□□□ -0.24
MARF1-205	ENST00000548025	SLC52A1	Q9NWF4	448 aa		13.53	□□□□□ -0.24
MARF1-205	ENST00000548025	HRC	P23327	699 aa		13.53	□□□□□ -0.24
MARF1-205	ENST00000548025	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.53	□□□□□ -0.24
MARF1-205	ENST00000548025	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
MARF1-205	ENST00000548025	CCDC144A	A2RUR9	1427 aa		13.53	□□□□□ -0.24
MARF1-205	ENST00000548025	GNL2	Q13823	731 aa	Known RBP	13.52	□□□□□ -0.25
MARF1-205	ENST00000548025	HSP90AB1	P08238	724 aa	Known RBP	13.52	□□□□□ -0.25
MARF1-205	ENST00000548025	KIF6	Q6ZMV9	814 aa		13.51	□□□□□ -0.25
MARF1-205	ENST00000548025	VPS53	Q5VIR6	699 aa		13.51	□□□□□ -0.25
MARF1-205	ENST00000548025	CADPS2	Q86UW7	1296 aa		13.51	□□□□□ -0.25
MARF1-205	ENST00000548025	MCC	P23508	829 aa		13.51	□□□□□ -0.25
MARF1-205	ENST00000548025	WWC2	Q6AWC2	1192 aa		13.5	□□□□□ -0.25
MARF1-205	ENST00000548025	MARCH6	O60337	910 aa		13.5	□□□□□ -0.25
MARF1-205	ENST00000548025	C11orf95	C9JLR9	678 aa	Predicted RBP	13.49	□□□□□ -0.25
MARF1-205	ENST00000548025	USP35	Q9P2H5	1018 aa		13.49	□□□□□ -0.25
MARF1-205	ENST00000548025	TRAK1	Q9UPV9	953 aa		13.49	□□□□□ -0.25
MARF1-205	ENST00000548025	ZNF710	Q8N1W2	664 aa		13.49	□□□□□ -0.25
MARF1-205	ENST00000548025	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.48	□□□□□ -0.25
MARF1-205	ENST00000548025	PRM3	Q9NNZ6	103 aa		13.48	□□□□□ -0.25
MARF1-205	ENST00000548025	SPG7	Q9UQ90	795 aa		13.48	□□□□□ -0.25
MARF1-205	ENST00000548025	FHOD3	Q2V2M9	1422 aa		13.48	□□□□□ -0.25
MARF1-205	ENST00000548025	RAD54L2	Q9Y4B4	1467 aa		13.47	□□□□□ -0.25
MARF1-205	ENST00000548025	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.47	□□□□□ -0.25
MARF1-205	ENST00000548025	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
MARF1-205	ENST00000548025	ABTB2	Q8N961	1025 aa		13.47	□□□□□ -0.25
MARF1-205	ENST00000548025	CCDC34	Q96HJ3	373 aa		13.47	□□□□□ -0.25
MARF1-205	ENST00000548025	ADAMTS2	O95450	1211 aa		13.46	□□□□□ -0.25
MARF1-205	ENST00000548025	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.46	□□□□□ -0.26
MARF1-205	ENST00000548025	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.46	□□□□□ -0.26
MARF1-205	ENST00000548025	CC2D1B	Q5T0F9	858 aa	Known RBP	13.45	□□□□□ -0.26
MARF1-205	ENST00000548025	KIAA1211	Q6ZU35	1233 aa		13.45	□□□□□ -0.26
MARF1-205	ENST00000548025	BAG6	P46379	1132 aa		13.45	□□□□□ -0.26
MARF1-205	ENST00000548025	CHMP4C	Q96CF2	233 aa		13.45	□□□□□ -0.26
MARF1-205	ENST00000548025	RBM42	Q9BTD8	480 aa	Known RBP	13.45	□□□□□ -0.26
MARF1-205	ENST00000548025	NLRP6	P59044	892 aa		13.44	□□□□□ -0.26
MARF1-205	ENST00000548025	CGNL1	Q0VF96	1302 aa		13.44	□□□□□ -0.26
MARF1-205	ENST00000548025	HMMR	O75330	724 aa		13.44	□□□□□ -0.26
MARF1-205	ENST00000548025	TMOD2	Q9NZR1	351 aa		13.44	□□□□□ -0.26
MARF1-205	ENST00000548025	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
MARF1-205	ENST00000548025	ANP32A	P39687	249 aa	Known RBP	13.44	□□□□□ -0.26
MARF1-205	ENST00000548025	DNAJC5	Q9H3Z4	198 aa		13.43	□□□□□ -0.26
MARF1-205	ENST00000548025	ZNF652	Q9Y2D9	606 aa		13.42	□□□□□ -0.26
MARF1-205	ENST00000548025	DENND4B	O75064	1496 aa	Predicted RBP	13.42	□□□□□ -0.26
MARF1-205	ENST00000548025	SCAPER	Q9BY12	1400 aa		13.42	□□□□□ -0.26
MARF1-205	ENST00000548025	ZRANB1	Q9UGI0	708 aa		13.41	□□□□□ -0.26
MARF1-205	ENST00000548025	TTLL12	Q14166	644 aa	Predicted RBP	13.41	□□□□□ -0.26
MARF1-205	ENST00000548025	FANCA	O15360	1455 aa		13.41	□□□□□ -0.26
MARF1-205	ENST00000548025	NES	P48681	1621 aa		13.41	□□□□□ -0.26
MARF1-205	ENST00000548025	MYOM3	Q5VTT5	1437 aa		13.41	□□□□□ -0.26
MARF1-205	ENST00000548025	ZPR1	O75312	459 aa		13.41	□□□□□ -0.26
MARF1-205	ENST00000548025	STK32B	Q9NY57	414 aa		13.4	□□□□□ -0.26
MARF1-205	ENST00000548025	RAD21	O60216	631 aa		13.4	□□□□□ -0.26
MARF1-205	ENST00000548025	KCNH5	Q8NCM2	988 aa		13.4	□□□□□ -0.26
MARF1-205	ENST00000548025	TIMELESS	Q9UNS1	1208 aa		13.4	□□□□□ -0.26
MARF1-205	ENST00000548025	KTN1	Q86UP2	1357 aa	Known RBP	13.4	□□□□□ -0.26
MARF1-205	ENST00000548025	MAP3K9	P80192	1104 aa		13.39	□□□□□ -0.27
MARF1-205	ENST00000548025	DDX10	Q13206	875 aa	Known RBP	13.39	□□□□□ -0.27
MARF1-205	ENST00000548025	L1TD1	Q5T7N2	865 aa	Known RBP	13.39	□□□□□ -0.27
MARF1-205	ENST00000548025	FAM135A	Q9P2D6	1515 aa		13.39	□□□□□ -0.27
MARF1-205	ENST00000548025	CHAF1A	Q13111	956 aa	Predicted RBP	13.39	□□□□□ -0.27
MARF1-205	ENST00000548025	GOLGA6L6	A8MZA4	724 aa		13.39	□□□□□ -0.27
MARF1-205	ENST00000548025	ZNF772	Q68DY9	489 aa	Predicted RBP	13.39	□□□□□ -0.27
MARF1-205	ENST00000548025	ZNF692	Q9BU19	519 aa	Predicted RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms