RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 KIF21AQ7Z4S6 1674 aa1.09□□□□□ -2.24
CEP290-203ENST00000547691 SRCAPQ6ZRS2 3230 aa1.08□□□□□ -2.24
CEP290-203ENST00000547691 BTBD11A6QL63 1104 aa1.08□□□□□ -2.24
CEP290-203ENST00000547691 INSM1Q01101 510 aaPredicted RBP1.08□□□□□ -2.24
CEP290-203ENST00000547691 IFNL1Q8IU54 200 aa1.08□□□□□ -2.24
CEP290-203ENST00000547691 MS4A4AQ96JQ5 239 aa1.08□□□□□ -2.24
CEP290-203ENST00000547691 GPR98Q8WXG9 6306 aa1.08□□□□□ -2.24
CEP290-203ENST00000547691 WDR97A6NE52 1622 aa1.08□□□□□ -2.24
CEP290-203ENST00000547691 STK17AQ9UEE5 414 aa1.08□□□□□ -2.24
CEP290-203ENST00000547691 GOLGA8CPA6NN73 597 aa1.08□□□□□ -2.24
CEP290-203ENST00000547691 NCAPD3P42695 1498 aa1.08□□□□□ -2.24
CEP290-203ENST00000547691 BRCA2P51587 3418 aa1.07□□□□□ -2.24
CEP290-203ENST00000547691 NRG2O14511 850 aaPredicted RBP1.07□□□□□ -2.24
CEP290-203ENST00000547691 TRIM35Q9UPQ4 493 aa1.07□□□□□ -2.24
CEP290-203ENST00000547691 ZCCHC6Q5VYS8 1495 aaKnown RBP1.07□□□□□ -2.24
CEP290-203ENST00000547691 CSMD1Q96PZ7 3565 aa1.07□□□□□ -2.24
CEP290-203ENST00000547691 KCNH8Q96L42 1107 aa1.07□□□□□ -2.24
CEP290-203ENST00000547691 TRAF7Q6Q0C0 670 aa1.06□□□□□ -2.24
CEP290-203ENST00000547691 PABPN1Q86U42 306 aaKnown RBP eCLIP1.06□□□□□ -2.24
CEP290-203ENST00000547691 L3MBTL3Q96JM7 780 aaPredicted RBP1.06□□□□□ -2.24
CEP290-203ENST00000547691 RASEFQ8IZ41 740 aa1.06□□□□□ -2.24
CEP290-203ENST00000547691 ERCC6L2Q5T890 1561 aa1.06□□□□□ -2.24
CEP290-203ENST00000547691 GFRA3O60609 400 aa1.05□□□□□ -2.24
CEP290-203ENST00000547691 DOK7Q18PE1 504 aa1.05□□□□□ -2.24
CEP290-203ENST00000547691 CLASP1Q7Z460 1538 aa1.05□□□□□ -2.24
CEP290-203ENST00000547691 POTECB2RU33 542 aa1.05□□□□□ -2.24
CEP290-203ENST00000547691 TSPYL2Q9H2G4 693 aaPredicted RBP1.05□□□□□ -2.24
CEP290-203ENST00000547691 SCRIBQ14160 1630 aa1.05□□□□□ -2.24
CEP290-203ENST00000547691 KIF13AQ9H1H9 1805 aa1.05□□□□□ -2.24
CEP290-203ENST00000547691 COBLO75128 1261 aa1.05□□□□□ -2.24
CEP290-203ENST00000547691 OTOGQ6ZRI0 2925 aa1.05□□□□□ -2.24
CEP290-203ENST00000547691 ARHGEF11O15085 1522 aa1.04□□□□□ -2.24
CEP290-203ENST00000547691 SMARCA4P51532 1647 aa1.04□□□□□ -2.24
CEP290-203ENST00000547691 RSF1Q96T23 1441 aaPredicted RBP1.04□□□□□ -2.24
CEP290-203ENST00000547691 MRC2Q9UBG0 1479 aa1.04□□□□□ -2.24
CEP290-203ENST00000547691 MYO15AQ9UKN7 3530 aa1.04□□□□□ -2.24
CEP290-203ENST00000547691 GLDNQ6ZMI3 551 aaPredicted RBP1.04□□□□□ -2.24
CEP290-203ENST00000547691 NESP48681 1621 aa1.04□□□□□ -2.24
CEP290-203ENST00000547691 CHD1O14646 1710 aa1.04□□□□□ -2.24
CEP290-203ENST00000547691 KHSRPQ92945 711 aaKnown RBP eCLIP1.03□□□□□ -2.242e-6■■□□□ 12.5
CEP290-203ENST00000547691 SHROOM2Q13796 1616 aa1.03□□□□□ -2.24
CEP290-203ENST00000547691 KDM6BO15054 1643 aa1.03□□□□□ -2.24
CEP290-203ENST00000547691 ZNF469Q96JG9 3925 aaPredicted RBP1.03□□□□□ -2.24
CEP290-203ENST00000547691 SZT2Q5T011 3432 aa1.03□□□□□ -2.24
CEP290-203ENST00000547691 MYT1Q01538 1121 aa1.03□□□□□ -2.24
CEP290-203ENST00000547691 KRTAP4-4Q9BYR3 166 aa1.03□□□□□ -2.24
CEP290-203ENST00000547691 CDH23Q9H251 3354 aa1.03□□□□□ -2.24
CEP290-203ENST00000547691 PSMG3-AS1Q96PY0 264 aa1.03□□□□□ -2.24
CEP290-203ENST00000547691 ATAD2BQ9ULI0 1458 aa1.03□□□□□ -2.24
CEP290-203ENST00000547691 TRIOO75962 3097 aa1.03□□□□□ -2.24
CEP290-203ENST00000547691 GOLGB1Q14789 3259 aaKnown RBP1.03□□□□□ -2.25
CEP290-203ENST00000547691 HTTP42858 3142 aa1.03□□□□□ -2.25
CEP290-203ENST00000547691 ARAP1Q96P48 1450 aa1.03□□□□□ -2.25
CEP290-203ENST00000547691 TARBP1Q13395 1621 aaKnown RBP1.02□□□□□ -2.25
CEP290-203ENST00000547691 LAMA3Q16787 3333 aa1.02□□□□□ -2.25
CEP290-203ENST00000547691 TNRC18O15417 2968 aaPredicted RBP1.02□□□□□ -2.25
CEP290-203ENST00000547691 PCNTO95613 3336 aa1.02□□□□□ -2.25
CEP290-203ENST00000547691 PPRC1Q5VV67 1664 aaKnown RBP1.02□□□□□ -2.25
CEP290-203ENST00000547691 BAZ1BQ9UIG0 1483 aaKnown RBP1.02□□□□□ -2.25
CEP290-203ENST00000547691 PTPN5P54829 565 aa1.02□□□□□ -2.25
CEP290-203ENST00000547691 VARS2Q5ST30 1063 aaKnown RBP1.02□□□□□ -2.25
CEP290-203ENST00000547691 ERCC6Q03468 1493 aa1.02□□□□□ -2.25
CEP290-203ENST00000547691 MKRN3Q13064 507 aaKnown RBP1.02□□□□□ -2.25
CEP290-203ENST00000547691 EIF4G3O43432 1585 aaKnown RBP1.02□□□□□ -2.25
CEP290-203ENST00000547691 KCTD12Q96CX2 325 aaKnown RBP1.01□□□□□ -2.25
CEP290-203ENST00000547691 MAPKBP1O60336 1514 aa1.01□□□□□ -2.25
CEP290-203ENST00000547691 ONECUT3O60422 494 aaPredicted RBP1.01□□□□□ -2.25
CEP290-203ENST00000547691 DMRTA1Q5VZB9 504 aa1.01□□□□□ -2.25
CEP290-203ENST00000547691 FBXO22Q8NEZ5 403 aa1.01□□□□□ -2.25
CEP290-203ENST00000547691 SPEGQ15772 3267 aa1.01□□□□□ -2.25
CEP290-203ENST00000547691 GLI2P10070 1586 aa1□□□□□ -2.25
CEP290-203ENST00000547691 ADGRD1Q6QNK2 874 aa1□□□□□ -2.25
CEP290-203ENST00000547691 SLC16A10Q8TF71 515 aa1□□□□□ -2.25
CEP290-203ENST00000547691 PDS5BQ9NTI5 1447 aa1□□□□□ -2.25
CEP290-203ENST00000547691 UTRNP46939 3433 aa1□□□□□ -2.25
CEP290-203ENST00000547691 PKDCCQ504Y2 493 aa1□□□□□ -2.25
CEP290-203ENST00000547691 IFT140Q96RY7 1462 aa1□□□□□ -2.25
CEP290-203ENST00000547691 PBRM1Q86U86 1689 aa1□□□□□ -2.25
CEP290-203ENST00000547691 WFS1O76024 890 aa1□□□□□ -2.25
CEP290-203ENST00000547691 DIP2BQ9P265 1576 aa1□□□□□ -2.25
CEP290-203ENST00000547691 URB2Q14146 1524 aaKnown RBP1□□□□□ -2.25
CEP290-203ENST00000547691 FBXO31Q5XUX0 539 aaPredicted RBP1□□□□□ -2.25
CEP290-203ENST00000547691 DPY19L2Q6NUT2 758 aa1□□□□□ -2.25
CEP290-203ENST00000547691 EHMT2Q96KQ7 1210 aa1□□□□□ -2.25
CEP290-203ENST00000547691 V9GY48 417 aaPredicted RBP1□□□□□ -2.25
CEP290-203ENST00000547691 HECW2Q9P2P5 1572 aa1□□□□□ -2.25
CEP290-203ENST00000547691 GDF7Q7Z4P5 450 aa0.99□□□□□ -2.25
CEP290-203ENST00000547691 TMEM106CQ9BVX2 250 aa0.99□□□□□ -2.25
CEP290-203ENST00000547691 CFTRP13569 1480 aa0.99□□□□□ -2.25
CEP290-203ENST00000547691 RNF225M0QZC1 329 aaPredicted RBP0.99□□□□□ -2.25
CEP290-203ENST00000547691 KRTAP5-5Q701N2 237 aaPredicted RBP0.99□□□□□ -2.25
CEP290-203ENST00000547691 TMEM151AQ8N4L1 468 aa0.99□□□□□ -2.25
CEP290-203ENST00000547691 SYNJ1O43426 1573 aa0.99□□□□□ -2.25
CEP290-203ENST00000547691 MAP3K4Q9Y6R4 1608 aa0.99□□□□□ -2.25
CEP290-203ENST00000547691 DNMBPQ6XZF7 1577 aa0.99□□□□□ -2.25
CEP290-203ENST00000547691 ABCA5Q8WWZ7 1642 aa0.99□□□□□ -2.25
CEP290-203ENST00000547691 ZNF316A6NFI3 1004 aaPredicted RBP0.99□□□□□ -2.25
CEP290-203ENST00000547691 PTCD2Q8WV60 388 aaKnown RBP0.99□□□□□ -2.25
CEP290-203ENST00000547691 CEP164Q9UPV0 1460 aa0.98□□□□□ -2.25
CEP290-203ENST00000547691 PCDHB13Q9Y5F0 798 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms