RNA–Protein interactions for RNA: ENST00000547602.1

AC004801.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC004801.3, Length 962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004801.3-201ENST00000547602 EPAS1Q99814 870 aa9.16□□□□□ -0.94
AC004801.3-201ENST00000547602 VPS9D1Q9Y2B5 631 aa9.15□□□□□ -0.94
AC004801.3-201ENST00000547602 ZBED2Q9BTP6 218 aa9.14□□□□□ -0.95
AC004801.3-201ENST00000547602 DDX12PQ92771 950 aa9.13□□□□□ -0.95
AC004801.3-201ENST00000547602 PPP1R3GB7ZBB8 358 aa9.12□□□□□ -0.95
AC004801.3-201ENST00000547602 COL9A1P20849 921 aa9.1□□□□□ -0.95
AC004801.3-201ENST00000547602 BHMG1C9JSJ3 638 aaPredicted RBP9.09□□□□□ -0.95
AC004801.3-201ENST00000547602 C6orf132Q5T0Z8 1188 aa9.09□□□□□ -0.95
AC004801.3-201ENST00000547602 KCNV2Q8TDN2 545 aa9.09□□□□□ -0.95
AC004801.3-201ENST00000547602 ARHGEF1Q92888 912 aaKnown RBP9.09□□□□□ -0.95
AC004801.3-201ENST00000547602 EN1Q05925 392 aaPredicted RBP9.08□□□□□ -0.96
AC004801.3-201ENST00000547602 NBR1Q14596 966 aa9.08□□□□□ -0.96
AC004801.3-201ENST00000547602 RBM33Q96EV2 1170 aaKnown RBP9.07□□□□□ -0.96
AC004801.3-201ENST00000547602 PRIM1P49642 420 aaKnown RBP9.06□□□□□ -0.96
AC004801.3-201ENST00000547602 PROX2Q3B8N5 592 aa9.05□□□□□ -0.96
AC004801.3-201ENST00000547602 STAC3Q96MF2 364 aa9.05□□□□□ -0.96
AC004801.3-201ENST00000547602 GRXCR2A6NFK2 248 aa9.04□□□□□ -0.96
AC004801.3-201ENST00000547602 RABGEF1Q9UJ41 708 aa9.04□□□□□ -0.96
AC004801.3-201ENST00000547602 MAP3K7O43318 606 aa9.03□□□□□ -0.96
AC004801.3-201ENST00000547602 OSBPP22059 807 aa9.03□□□□□ -0.96
AC004801.3-201ENST00000547602 TSR1Q2NL82 804 aaKnown RBP9.03□□□□□ -0.96
AC004801.3-201ENST00000547602 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
AC004801.3-201ENST00000547602 P3H3Q8IVL6 736 aa9.02□□□□□ -0.97
AC004801.3-201ENST00000547602 NBPF3Q9H094 633 aa9.02□□□□□ -0.97
AC004801.3-201ENST00000547602 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
AC004801.3-201ENST00000547602 KCTD12Q96CX2 325 aaKnown RBP9.01□□□□□ -0.97
AC004801.3-201ENST00000547602 HCSTQ9UBK5 93 aa9.01□□□□□ -0.97
AC004801.3-201ENST00000547602 TRIM6-TRIM34B2RNG4 842 aa9□□□□□ -0.97
AC004801.3-201ENST00000547602 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
AC004801.3-201ENST00000547602 KIAA1468Q9P260 1216 aa8.99□□□□□ -0.97
AC004801.3-201ENST00000547602 MLLT3P42568 568 aaPredicted RBP8.98□□□□□ -0.97
AC004801.3-201ENST00000547602 LAPTM4BQ86VI4 370 aa8.97□□□□□ -0.97
AC004801.3-201ENST00000547602 CERKQ8TCT0 537 aa8.97□□□□□ -0.97
AC004801.3-201ENST00000547602 GOLGA8CPA6NN73 597 aa8.96□□□□□ -0.98
AC004801.3-201ENST00000547602 THSD4Q6ZMP0 1018 aa8.96□□□□□ -0.98
AC004801.3-201ENST00000547602 CDHR5Q9HBB8 845 aa8.96□□□□□ -0.98
AC004801.3-201ENST00000547602 TSKSQ9UJT2 592 aa8.96□□□□□ -0.98
AC004801.3-201ENST00000547602 WNT2BQ93097 391 aa8.95□□□□□ -0.98
AC004801.3-201ENST00000547602 KDM2AQ9Y2K7 1162 aa8.95□□□□□ -0.98
AC004801.3-201ENST00000547602 PRSS12P56730 875 aa8.94□□□□□ -0.98
AC004801.3-201ENST00000547602 CDCA7LQ96GN5 454 aa8.94□□□□□ -0.98
AC004801.3-201ENST00000547602 FAM198AQ9UFP1 575 aa8.93□□□□□ -0.98
AC004801.3-201ENST00000547602 PACS2Q86VP3 889 aa8.92□□□□□ -0.98
AC004801.3-201ENST00000547602 VSIG10Q8N0Z9 540 aa8.92□□□□□ -0.98
AC004801.3-201ENST00000547602 NPDC1Q9NQX5 325 aaPredicted RBP8.92□□□□□ -0.98
AC004801.3-201ENST00000547602 RBM27Q9P2N5 1060 aaKnown RBP8.92□□□□□ -0.98
AC004801.3-201ENST00000547602 SEPT9Q9UHD8 586 aaPredicted RBP8.92□□□□□ -0.98
AC004801.3-201ENST00000547602 SEMA3EO15041 775 aa8.91□□□□□ -0.98
AC004801.3-201ENST00000547602 FAM98CQ17RN3 349 aaKnown RBP8.91□□□□□ -0.98
AC004801.3-201ENST00000547602 ZFRQ96KR1 1074 aaKnown RBP8.91□□□□□ -0.98
AC004801.3-201ENST00000547602 PTPN5P54829 565 aa8.9□□□□□ -0.98
AC004801.3-201ENST00000547602 ANKK1Q8NFD2 765 aa8.9□□□□□ -0.98
AC004801.3-201ENST00000547602 TTC13Q8NBP0 860 aa8.89□□□□□ -0.99
AC004801.3-201ENST00000547602 SOWAHBA6NEL2 793 aa8.88□□□□□ -0.99
AC004801.3-201ENST00000547602 TESPA1A2RU30 521 aaPredicted RBP8.87□□□□□ -0.99
AC004801.3-201ENST00000547602 C3orf80F5H4A9 247 aa8.87□□□□□ -0.99
AC004801.3-201ENST00000547602 NBPF26B4DH59 902 aa8.86□□□□□ -0.99
AC004801.3-201ENST00000547602 BCAMP50895 628 aa8.86□□□□□ -0.99
AC004801.3-201ENST00000547602 PADI6Q6TGC4 694 aa8.86□□□□□ -0.99
AC004801.3-201ENST00000547602 TATDN2Q93075 761 aa8.86□□□□□ -0.99
AC004801.3-201ENST00000547602 PLA2G2EQ9NZK7 142 aa8.86□□□□□ -0.99
AC004801.3-201ENST00000547602 SMAPO00193 183 aa8.85□□□□□ -0.99
AC004801.3-201ENST00000547602 PTGDRQ13258 359 aa8.85□□□□□ -0.99
AC004801.3-201ENST00000547602 PNMA3Q9UL41 463 aa8.84□□□□□ -0.99
AC004801.3-201ENST00000547602 NUDT18Q6ZVK8 323 aa8.82□□□□□ -1
AC004801.3-201ENST00000547602 BCANQ96GW7 911 aa8.82□□□□□ -1
AC004801.3-201ENST00000547602 LRCH3Q96II8 777 aa8.82□□□□□ -1
AC004801.3-201ENST00000547602 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.82□□□□□ -1
AC004801.3-201ENST00000547602 NUTM2FA1L443 756 aa8.81□□□□□ -1
AC004801.3-201ENST00000547602 NYAP1Q6ZVC0 841 aa8.8□□□□□ -1
AC004801.3-201ENST00000547602 WBP1LQ9NX94 342 aa8.8□□□□□ -1
AC004801.3-201ENST00000547602 SMYD5Q6GMV2 418 aa8.79□□□□□ -1
AC004801.3-201ENST00000547602 SAMD7Q7Z3H4 446 aa8.79□□□□□ -1
AC004801.3-201ENST00000547602 TSR3Q9UJK0 312 aaKnown RBP8.79□□□□□ -1
AC004801.3-201ENST00000547602 HPS5Q9UPZ3 1129 aa8.79□□□□□ -1
AC004801.3-201ENST00000547602 FCHSD2O94868 740 aa8.78□□□□□ -1
AC004801.3-201ENST00000547602 RBM26Q5T8P6 1007 aaKnown RBP8.78□□□□□ -1
AC004801.3-201ENST00000547602 IFFO2Q5TF58 517 aa8.78□□□□□ -1
AC004801.3-201ENST00000547602 EYA1Q99502 592 aa8.78□□□□□ -1
AC004801.3-201ENST00000547602 ITGBL1O95965 494 aaPredicted RBP8.75□□□□□ -1.01
AC004801.3-201ENST00000547602 ADGRG1Q9Y653 693 aa8.75□□□□□ -1.01
AC004801.3-201ENST00000547602 GPR37O15354 613 aa8.74□□□□□ -1.01
AC004801.3-201ENST00000547602 PPP4CP60510 307 aa8.73□□□□□ -1.01
AC004801.3-201ENST00000547602 HIC1Q14526 733 aa8.73□□□□□ -1.01
AC004801.3-201ENST00000547602 HDGFP51858 240 aaKnown RBP8.72□□□□□ -1.01
AC004801.3-201ENST00000547602 SWT1Q5T5J6 900 aaKnown RBP8.72□□□□□ -1.01
AC004801.3-201ENST00000547602 RBM46Q8TBY0 533 aaKnown RBP8.72□□□□□ -1.01
AC004801.3-201ENST00000547602 GNPATO15228 680 aa8.7□□□□□ -1.02
AC004801.3-201ENST00000547602 DNAJB2P25686 324 aa8.7□□□□□ -1.02
AC004801.3-201ENST00000547602 FAM161AQ3B820 660 aa8.7□□□□□ -1.02
AC004801.3-201ENST00000547602 SLF2Q8IX21 1173 aa8.69□□□□□ -1.02
AC004801.3-201ENST00000547602 A0A0G2JS52 829 aa8.68□□□□□ -1.02
AC004801.3-201ENST00000547602 RCCD1A6NED2 376 aa8.68□□□□□ -1.02
AC004801.3-201ENST00000547602 RNF40O75150 1001 aa8.68□□□□□ -1.02
AC004801.3-201ENST00000547602 TMEM134Q9H6X4 195 aa8.68□□□□□ -1.02
AC004801.3-201ENST00000547602 FECHP22830 423 aa8.67□□□□□ -1.02
AC004801.3-201ENST00000547602 APLP1P51693 650 aa8.67□□□□□ -1.02
AC004801.3-201ENST00000547602 GPIHBP1Q8IV16 184 aa8.67□□□□□ -1.02
AC004801.3-201ENST00000547602 PXYLP1Q8TE99 480 aa8.67□□□□□ -1.02
AC004801.3-201ENST00000547602 NECTIN2Q92692 538 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms