RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 BCORL1Q5H9F3 1711 aa18.52■□□□□ 0.55
SLC38A1-204ENST00000546893 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
SLC38A1-204ENST00000546893 MAST1Q9Y2H9 1570 aa18.51■□□□□ 0.55
SLC38A1-204ENST00000546893 CCDC141Q6ZP82 1450 aa18.51■□□□□ 0.55
SLC38A1-204ENST00000546893 CCDC184Q52MB2 194 aa18.51■□□□□ 0.55
SLC38A1-204ENST00000546893 ZNF777Q9ULD5 760 aaPredicted RBP18.51■□□□□ 0.55
SLC38A1-204ENST00000546893 SLC24A1O60721 1099 aa18.5■□□□□ 0.55
SLC38A1-204ENST00000546893 PREX2Q70Z35 1606 aa18.49■□□□□ 0.55
SLC38A1-204ENST00000546893 RALBP1Q15311 655 aa18.48■□□□□ 0.55
SLC38A1-204ENST00000546893 RNF123Q5XPI4 1314 aa18.47■□□□□ 0.55
SLC38A1-204ENST00000546893 LAMC1P11047 1609 aa18.47■□□□□ 0.55
SLC38A1-204ENST00000546893 NUDCQ9Y266 331 aa18.47■□□□□ 0.55
SLC38A1-204ENST00000546893 BRD4O60885 1362 aaPredicted RBP18.47■□□□□ 0.55
SLC38A1-204ENST00000546893 PLEKHH2Q8IVE3 1493 aa18.47■□□□□ 0.55
SLC38A1-204ENST00000546893 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
SLC38A1-204ENST00000546893 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
SLC38A1-204ENST00000546893 UNC13BO14795 1591 aa18.45■□□□□ 0.54
SLC38A1-204ENST00000546893 INSRP06213 1382 aa18.44■□□□□ 0.54
SLC38A1-204ENST00000546893 E9PCH4 1651 aa18.44■□□□□ 0.54
SLC38A1-204ENST00000546893 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
SLC38A1-204ENST00000546893 FAM135AQ9P2D6 1515 aa18.43■□□□□ 0.54
SLC38A1-204ENST00000546893 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
SLC38A1-204ENST00000546893 WASHC2CQ9Y4E1 1318 aa18.42■□□□□ 0.54
SLC38A1-204ENST00000546893 PLXNC1O60486 1568 aa18.41■□□□□ 0.54
SLC38A1-204ENST00000546893 SAMD9LQ8IVG5 1584 aa18.41■□□□□ 0.54
SLC38A1-204ENST00000546893 LRPPRCP42704 1394 aaKnown RBP18.41■□□□□ 0.54
SLC38A1-204ENST00000546893 MYBBP1AQ9BQG0 1328 aaKnown RBP18.41■□□□□ 0.54
SLC38A1-204ENST00000546893 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
SLC38A1-204ENST00000546893 PNISRQ8TF01 805 aaKnown RBP18.4■□□□□ 0.54
SLC38A1-204ENST00000546893 GPRASP1Q5JY77 1395 aa18.4■□□□□ 0.54
SLC38A1-204ENST00000546893 TMC1Q8TDI8 760 aa18.39■□□□□ 0.53
SLC38A1-204ENST00000546893 CDC42BPBQ9Y5S2 1711 aa18.39■□□□□ 0.53
SLC38A1-204ENST00000546893 CCDC144AA2RUR9 1427 aa18.39■□□□□ 0.53
SLC38A1-204ENST00000546893 ATP10AO60312 1499 aa18.38■□□□□ 0.53
SLC38A1-204ENST00000546893 TRPM1Q7Z4N2 1603 aa18.38■□□□□ 0.53
SLC38A1-204ENST00000546893 IRX6P78412 446 aaPredicted RBP18.38■□□□□ 0.53
SLC38A1-204ENST00000546893 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
SLC38A1-204ENST00000546893 PRAG1Q86YV5 1406 aa18.37■□□□□ 0.53
SLC38A1-204ENST00000546893 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
SLC38A1-204ENST00000546893 PDE3BQ13370 1112 aa18.36■□□□□ 0.53
SLC38A1-204ENST00000546893 SHROOM2Q13796 1616 aa18.35■□□□□ 0.53
SLC38A1-204ENST00000546893 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
SLC38A1-204ENST00000546893 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.52
SLC38A1-204ENST00000546893 ERBINQ96RT1 1412 aa18.33■□□□□ 0.52
SLC38A1-204ENST00000546893 MAGI2Q86UL8 1455 aa18.33■□□□□ 0.52
SLC38A1-204ENST00000546893 ST20-MTHFSA0A0A6YYL1 179 aa18.32■□□□□ 0.52
SLC38A1-204ENST00000546893 DCAF11Q8TEB1 546 aa18.32■□□□□ 0.52
SLC38A1-204ENST00000546893 HNRNPMP52272 730 aaKnown RBP eCLIP18.32■□□□□ 0.526e-7■■■■□ 23.4
SLC38A1-204ENST00000546893 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
SLC38A1-204ENST00000546893 PRDM15P57071 1507 aaPredicted RBP18.31■□□□□ 0.52
SLC38A1-204ENST00000546893 PARD3Q8TEW0 1356 aa18.31■□□□□ 0.52
SLC38A1-204ENST00000546893 PODXL2Q9NZ53 605 aa18.31■□□□□ 0.52
SLC38A1-204ENST00000546893 STAC3Q96MF2 364 aa18.31■□□□□ 0.52
SLC38A1-204ENST00000546893 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
SLC38A1-204ENST00000546893 ARHGAP5Q13017 1502 aa18.3■□□□□ 0.52
SLC38A1-204ENST00000546893 DAXXQ9UER7 740 aaPredicted RBP18.29■□□□□ 0.52
SLC38A1-204ENST00000546893 SYCP2Q9BX26 1530 aa18.29■□□□□ 0.52
SLC38A1-204ENST00000546893 ABCC2Q92887 1545 aa18.29■□□□□ 0.52
SLC38A1-204ENST00000546893 B4GALNT3Q6L9W6 998 aa18.29■□□□□ 0.52
SLC38A1-204ENST00000546893 POLR3GLQ9BT43 218 aa18.29■□□□□ 0.52
SLC38A1-204ENST00000546893 COL17A1Q9UMD9 1497 aaPredicted RBP18.29■□□□□ 0.52
SLC38A1-204ENST00000546893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.28■□□□□ 0.52
SLC38A1-204ENST00000546893 ERCC6L2Q5T890 1561 aa18.26■□□□□ 0.51
SLC38A1-204ENST00000546893 IPO9Q96P70 1041 aaKnown RBP18.25■□□□□ 0.51
SLC38A1-204ENST00000546893 A2MP01023 1474 aa18.25■□□□□ 0.51
SLC38A1-204ENST00000546893 TTC37Q6PGP7 1564 aa18.25■□□□□ 0.51
SLC38A1-204ENST00000546893 KDM2AQ9Y2K7 1162 aa18.24■□□□□ 0.51
SLC38A1-204ENST00000546893 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
SLC38A1-204ENST00000546893 ARAP3Q8WWN8 1544 aa18.23■□□□□ 0.51
SLC38A1-204ENST00000546893 BRPF3Q9ULD4 1205 aa18.23■□□□□ 0.51
SLC38A1-204ENST00000546893 RNF17Q9BXT8 1623 aaKnown RBP18.22■□□□□ 0.51
SLC38A1-204ENST00000546893 UHRF1BP1LA0JNW5 1464 aa18.22■□□□□ 0.51
SLC38A1-204ENST00000546893 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
SLC38A1-204ENST00000546893 PLCH2O75038 1416 aa18.2■□□□□ 0.5
SLC38A1-204ENST00000546893 TMF1P82094 1093 aa18.2■□□□□ 0.5
SLC38A1-204ENST00000546893 PER1O15534 1290 aaPredicted RBP18.19■□□□□ 0.5
SLC38A1-204ENST00000546893 RTEL1-TNFRSF6BF6WH68 1400 aa18.19■□□□□ 0.5
SLC38A1-204ENST00000546893 ZBTB47Q9UFB7 747 aaPredicted RBP18.18■□□□□ 0.5
SLC38A1-204ENST00000546893 BLMP54132 1417 aaPredicted RBP18.18■□□□□ 0.5
SLC38A1-204ENST00000546893 NEURL4Q96JN8 1562 aa18.18■□□□□ 0.5
SLC38A1-204ENST00000546893 ZMYND15Q9H091 742 aa18.18■□□□□ 0.5
SLC38A1-204ENST00000546893 RRP1P56182 461 aaKnown RBP18.17■□□□□ 0.5
SLC38A1-204ENST00000546893 CDCA8Q53HL2 280 aa18.16■□□□□ 0.5
SLC38A1-204ENST00000546893 ABCC1P33527 1531 aa18.16■□□□□ 0.5
SLC38A1-204ENST00000546893 ANP32AP39687 249 aaKnown RBP18.16■□□□□ 0.5
SLC38A1-204ENST00000546893 RSPH6AQ9H0K4 717 aa18.16■□□□□ 0.5
SLC38A1-204ENST00000546893 EFCAB2Q5VUJ9 269 aa18.15■□□□□ 0.5
SLC38A1-204ENST00000546893 TESK2Q96S53 571 aa18.15■□□□□ 0.5
SLC38A1-204ENST00000546893 RCAN3Q9UKA8 241 aa18.15■□□□□ 0.5
SLC38A1-204ENST00000546893 SCAPERQ9BY12 1400 aa18.13■□□□□ 0.49
SLC38A1-204ENST00000546893 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
SLC38A1-204ENST00000546893 TRPM2O94759 1503 aa18.13■□□□□ 0.49
SLC38A1-204ENST00000546893 USP35Q9P2H5 1018 aa18.11■□□□□ 0.49
SLC38A1-204ENST00000546893 MS4A1P11836 297 aa18.11■□□□□ 0.49
SLC38A1-204ENST00000546893 IQGAP1P46940 1657 aa18.1■□□□□ 0.49
SLC38A1-204ENST00000546893 SYNMO15061 1565 aa18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 MADDQ8WXG6 1647 aa18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 NPC1L1Q9UHC9 1359 aa18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 NEFMP07197 916 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms