RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ARHGEF5Q12774 1597 aa16.79■□□□□ 0.28
CCDC38-202ENST00000546386 FAM135AQ9P2D6 1515 aa16.79■□□□□ 0.28
CCDC38-202ENST00000546386 TEX14Q8IWB6 1497 aa16.79■□□□□ 0.28
CCDC38-202ENST00000546386 CARD11Q9BXL7 1154 aa16.79■□□□□ 0.28
CCDC38-202ENST00000546386 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
CCDC38-202ENST00000546386 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.28
CCDC38-202ENST00000546386 ABCC1P33527 1531 aa16.77■□□□□ 0.28
CCDC38-202ENST00000546386 ANP32CO43423 234 aa16.75■□□□□ 0.27
CCDC38-202ENST00000546386 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
CCDC38-202ENST00000546386 ST20-MTHFSA0A0A6YYL1 179 aa16.74■□□□□ 0.27
CCDC38-202ENST00000546386 PLA2R1Q13018 1463 aa16.74■□□□□ 0.27
CCDC38-202ENST00000546386 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
CCDC38-202ENST00000546386 CFAP65Q6ZU64 1925 aaKnown RBP16.73■□□□□ 0.27
CCDC38-202ENST00000546386 MLECQ14165 292 aa16.72■□□□□ 0.27
CCDC38-202ENST00000546386 KIF7Q2M1P5 1343 aa16.7■□□□□ 0.26
CCDC38-202ENST00000546386 USP47Q96K76 1375 aa16.69■□□□□ 0.26
CCDC38-202ENST00000546386 DUOX2Q9NRD8 1548 aa16.67■□□□□ 0.26
CCDC38-202ENST00000546386 ABCA9Q8IUA7 1624 aa16.67■□□□□ 0.26
CCDC38-202ENST00000546386 ROCK2O75116 1388 aaKnown RBP16.67■□□□□ 0.26
CCDC38-202ENST00000546386 ZFYVE16Q7Z3T8 1539 aa16.67■□□□□ 0.26
CCDC38-202ENST00000546386 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
CCDC38-202ENST00000546386 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
CCDC38-202ENST00000546386 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
CCDC38-202ENST00000546386 ATP7AQ04656 1500 aa16.65■□□□□ 0.26
CCDC38-202ENST00000546386 TSPOAP1O95153 1857 aa16.65■□□□□ 0.26
CCDC38-202ENST00000546386 WASHC2CQ9Y4E1 1318 aa16.64■□□□□ 0.25
CCDC38-202ENST00000546386 UGGT1Q9NYU2 1555 aa16.64■□□□□ 0.25
CCDC38-202ENST00000546386 CCDC7Q96M83 1385 aa16.63■□□□□ 0.25
CCDC38-202ENST00000546386 ERBINQ96RT1 1412 aa16.62■□□□□ 0.25
CCDC38-202ENST00000546386 FAM9BQ8IZU0 186 aa16.62■□□□□ 0.25
CCDC38-202ENST00000546386 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
CCDC38-202ENST00000546386 A2MP01023 1474 aa16.6■□□□□ 0.25
CCDC38-202ENST00000546386 YEATS2Q9ULM3 1422 aa16.6■□□□□ 0.25
CCDC38-202ENST00000546386 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
CCDC38-202ENST00000546386 PLXNC1O60486 1568 aa16.59■□□□□ 0.25
CCDC38-202ENST00000546386 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
CCDC38-202ENST00000546386 KDM5DQ9BY66 1539 aa16.58■□□□□ 0.24
CCDC38-202ENST00000546386 KANK1Q14678 1352 aa16.58■□□□□ 0.24
CCDC38-202ENST00000546386 ZNF518AQ6AHZ1 1483 aa16.57■□□□□ 0.24
CCDC38-202ENST00000546386 RTEL1-TNFRSF6BF6WH68 1400 aa16.56■□□□□ 0.24
CCDC38-202ENST00000546386 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
CCDC38-202ENST00000546386 CFAP70Q5T0N1 1121 aa16.56■□□□□ 0.24
CCDC38-202ENST00000546386 FBXO31Q5XUX0 539 aaPredicted RBP16.56■□□□□ 0.24
CCDC38-202ENST00000546386 POGZQ7Z3K3 1410 aa16.56■□□□□ 0.24
CCDC38-202ENST00000546386 UNC13BO14795 1591 aa16.55■□□□□ 0.24
CCDC38-202ENST00000546386 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
CCDC38-202ENST00000546386 ATP10AO60312 1499 aa16.54■□□□□ 0.24
CCDC38-202ENST00000546386 TMEM132EQ6IEE7 984 aa16.54■□□□□ 0.24
CCDC38-202ENST00000546386 BCORL1Q5H9F3 1711 aa16.53■□□□□ 0.24
CCDC38-202ENST00000546386 E9PCH4 1651 aa16.53■□□□□ 0.24
CCDC38-202ENST00000546386 IQGAP3Q86VI3 1631 aa16.53■□□□□ 0.24
CCDC38-202ENST00000546386 PRAG1Q86YV5 1406 aa16.52■□□□□ 0.24
CCDC38-202ENST00000546386 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
CCDC38-202ENST00000546386 HNRNPUQ00839 825 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC38-202ENST00000546386 PRKRIP1Q9H875 184 aaPredicted RBP16.52■□□□□ 0.24
CCDC38-202ENST00000546386 INO80Q9ULG1 1556 aaPredicted RBP16.52■□□□□ 0.23
CCDC38-202ENST00000546386 MRS2Q9HD23 443 aa16.52■□□□□ 0.23
CCDC38-202ENST00000546386 SAFB2Q14151 953 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC38-202ENST00000546386 ARAP3Q8WWN8 1544 aa16.51■□□□□ 0.23
CCDC38-202ENST00000546386 CC2D1BQ5T0F9 858 aaKnown RBP16.49■□□□□ 0.23
CCDC38-202ENST00000546386 BCANQ96GW7 911 aa16.49■□□□□ 0.23
CCDC38-202ENST00000546386 CNTLNQ9NXG0 1405 aa16.49■□□□□ 0.23
CCDC38-202ENST00000546386 ARID4BQ4LE39 1312 aaPredicted RBP16.48■□□□□ 0.23
CCDC38-202ENST00000546386 SALL2Q9Y467 1007 aaPredicted RBP16.47■□□□□ 0.23
CCDC38-202ENST00000546386 MAGI2Q86UL8 1455 aa16.47■□□□□ 0.23
CCDC38-202ENST00000546386 DISP3Q9P2K9 1392 aa16.47■□□□□ 0.23
CCDC38-202ENST00000546386 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
CCDC38-202ENST00000546386 PRDM15P57071 1507 aaPredicted RBP16.47■□□□□ 0.23
CCDC38-202ENST00000546386 RALGAPBQ86X10 1494 aa16.46■□□□□ 0.23
CCDC38-202ENST00000546386 UHRF1BP1Q6BDS2 1440 aa16.46■□□□□ 0.23
CCDC38-202ENST00000546386 FRMPD1Q5SYB0 1578 aa16.46■□□□□ 0.23
CCDC38-202ENST00000546386 NPATQ14207 1427 aa16.45■□□□□ 0.22
CCDC38-202ENST00000546386 ABCA6Q8N139 1617 aa16.45■□□□□ 0.22
CCDC38-202ENST00000546386 KDM5CP41229 1560 aa16.45■□□□□ 0.22
CCDC38-202ENST00000546386 IDI1Q13907 227 aa16.45■□□□□ 0.22
CCDC38-202ENST00000546386 STK26Q9P289 416 aa16.45■□□□□ 0.22
CCDC38-202ENST00000546386 COL17A1Q9UMD9 1497 aaPredicted RBP16.45■□□□□ 0.22
CCDC38-202ENST00000546386 CLTCL1P53675 1640 aa16.45■□□□□ 0.22
CCDC38-202ENST00000546386 TESK2Q96S53 571 aa16.44■□□□□ 0.22
CCDC38-202ENST00000546386 CEP152O94986 1710 aa16.44■□□□□ 0.22
CCDC38-202ENST00000546386 MROH1Q8NDA8 1641 aa16.44■□□□□ 0.22
CCDC38-202ENST00000546386 PIAS4Q8N2W9 510 aaPredicted RBP16.43■□□□□ 0.22
CCDC38-202ENST00000546386 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
CCDC38-202ENST00000546386 CCER2I3L3R5 266 aa16.42■□□□□ 0.22
CCDC38-202ENST00000546386 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
CCDC38-202ENST00000546386 PANK3Q9H999 370 aa16.42■□□□□ 0.22
CCDC38-202ENST00000546386 HECW2Q9P2P5 1572 aa16.41■□□□□ 0.22
CCDC38-202ENST00000546386 MLH3Q9UHC1 1453 aa16.41■□□□□ 0.22
CCDC38-202ENST00000546386 PPRC1Q5VV67 1664 aaKnown RBP16.41■□□□□ 0.22
CCDC38-202ENST00000546386 STAG3Q9UJ98 1225 aa16.4■□□□□ 0.22
CCDC38-202ENST00000546386 NOS1P29475 1434 aa16.4■□□□□ 0.22
CCDC38-202ENST00000546386 NEO1Q92859 1461 aa16.39■□□□□ 0.21
CCDC38-202ENST00000546386 PTPRTO14522 1441 aa16.39■□□□□ 0.21
CCDC38-202ENST00000546386 DIP2BQ9P265 1576 aa16.39■□□□□ 0.21
CCDC38-202ENST00000546386 CEBPAP49715 358 aaPredicted RBP16.37■□□□□ 0.21
CCDC38-202ENST00000546386 SPHKAPQ2M3C7 1700 aa16.37■□□□□ 0.21
CCDC38-202ENST00000546386 MAP3K4Q9Y6R4 1608 aa16.37■□□□□ 0.21
CCDC38-202ENST00000546386 TRPM2O94759 1503 aa16.36■□□□□ 0.21
CCDC38-202ENST00000546386 DEPDC5O75140 1603 aa16.36■□□□□ 0.21
CCDC38-202ENST00000546386 TRPM1Q7Z4N2 1603 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms