RNA–Protein interactions for RNA: ENST00000545638.2

NCKAP1L-202, Transcript of NCK associated protein 1 like, humanhuman

TSL 2 BASIC

Gene NCKAP1L, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-202ENST00000545638 TMEM132EQ6IEE7 984 aa12.15□□□□□ -0.46
NCKAP1L-202ENST00000545638 MIER1Q8N108 512 aa12.15□□□□□ -0.46
NCKAP1L-202ENST00000545638 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
NCKAP1L-202ENST00000545638 VGFO15240 615 aaPredicted RBP12.14□□□□□ -0.47
NCKAP1L-202ENST00000545638 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
NCKAP1L-202ENST00000545638 ST20-MTHFSA0A0A6YYL1 179 aa12.14□□□□□ -0.47
NCKAP1L-202ENST00000545638 SRPK2P78362 688 aaKnown RBP12.14□□□□□ -0.47
NCKAP1L-202ENST00000545638 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
NCKAP1L-202ENST00000545638 SENP3-EIF4A1A0A087X0R7 540 aa12.13□□□□□ -0.47
NCKAP1L-202ENST00000545638 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
NCKAP1L-202ENST00000545638 A2MP01023 1474 aa12.12□□□□□ -0.47
NCKAP1L-202ENST00000545638 IDI1Q13907 227 aa12.11□□□□□ -0.47
NCKAP1L-202ENST00000545638 NBPF1Q3BBV0 1214 aa12.11□□□□□ -0.47
NCKAP1L-202ENST00000545638 FAM9BQ8IZU0 186 aa12.11□□□□□ -0.47
NCKAP1L-202ENST00000545638 NBPF8Q3BBV2 869 aa12.11□□□□□ -0.47
NCKAP1L-202ENST00000545638 TMF1P82094 1093 aa12.1□□□□□ -0.47
NCKAP1L-202ENST00000545638 LMOD2Q6P5Q4 547 aa12.1□□□□□ -0.47
NCKAP1L-202ENST00000545638 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
NCKAP1L-202ENST00000545638 SALL2Q9Y467 1007 aaPredicted RBP12.1□□□□□ -0.47
NCKAP1L-202ENST00000545638 MBD5Q9P267 1494 aa12.09□□□□□ -0.47
NCKAP1L-202ENST00000545638 POGZQ7Z3K3 1410 aa12.09□□□□□ -0.47
NCKAP1L-202ENST00000545638 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
NCKAP1L-202ENST00000545638 TXNDC2Q86VQ3 553 aa12.09□□□□□ -0.47
NCKAP1L-202ENST00000545638 YEATS2Q9ULM3 1422 aa12.09□□□□□ -0.47
NCKAP1L-202ENST00000545638 LRRIQ1Q96JM4 1722 aa12.09□□□□□ -0.47
NCKAP1L-202ENST00000545638 ZBTB7CA1YPR0 619 aa12.09□□□□□ -0.47
NCKAP1L-202ENST00000545638 SLC26A8Q96RN1 970 aa12.08□□□□□ -0.48
NCKAP1L-202ENST00000545638 SLC52A1Q9NWF4 448 aa12.08□□□□□ -0.48
NCKAP1L-202ENST00000545638 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.48
NCKAP1L-202ENST00000545638 CFAP65Q6ZU64 1925 aaKnown RBP12.08□□□□□ -0.48
NCKAP1L-202ENST00000545638 CDCA8Q53HL2 280 aa12.07□□□□□ -0.48
NCKAP1L-202ENST00000545638 CC2D1BQ5T0F9 858 aaKnown RBP12.07□□□□□ -0.48
NCKAP1L-202ENST00000545638 SAMD9LQ8IVG5 1584 aa12.07□□□□□ -0.48
NCKAP1L-202ENST00000545638 DNMT1P26358 1616 aaKnown RBP12.07□□□□□ -0.48
NCKAP1L-202ENST00000545638 ARHGEF12Q9NZN5 1544 aa12.07□□□□□ -0.48
NCKAP1L-202ENST00000545638 SOX12O15370 315 aa12.06□□□□□ -0.48
NCKAP1L-202ENST00000545638 KNSTRNQ9Y448 316 aa12.06□□□□□ -0.48
NCKAP1L-202ENST00000545638 PPM1GO15355 546 aaPredicted RBP12.06□□□□□ -0.48
NCKAP1L-202ENST00000545638 MINK1Q8N4C8 1332 aaPredicted RBP12.06□□□□□ -0.48
NCKAP1L-202ENST00000545638 MRS2Q9HD23 443 aa12.05□□□□□ -0.48
NCKAP1L-202ENST00000545638 DUOX2Q9NRD8 1548 aa12.05□□□□□ -0.48
NCKAP1L-202ENST00000545638 NEO1Q92859 1461 aa12.05□□□□□ -0.48
NCKAP1L-202ENST00000545638 ATP7AQ04656 1500 aa12.04□□□□□ -0.48
NCKAP1L-202ENST00000545638 ERBINQ96RT1 1412 aa12.04□□□□□ -0.48
NCKAP1L-202ENST00000545638 CDC42BPAQ5VT25 1732 aa12.04□□□□□ -0.48
NCKAP1L-202ENST00000545638 USP47Q96K76 1375 aa12.03□□□□□ -0.48
NCKAP1L-202ENST00000545638 AEBP2Q6ZN18 517 aaPredicted RBP12.03□□□□□ -0.48
NCKAP1L-202ENST00000545638 THEMISQ8N1K5 641 aaPredicted RBP12.03□□□□□ -0.48
NCKAP1L-202ENST00000545638 RTEL1-TNFRSF6BF6WH68 1400 aa12.02□□□□□ -0.48
NCKAP1L-202ENST00000545638 SLC24A1O60721 1099 aa12.02□□□□□ -0.49
NCKAP1L-202ENST00000545638 PREX2Q70Z35 1606 aa12.02□□□□□ -0.49
NCKAP1L-202ENST00000545638 SHANK2Q9UPX8 1470 aa12.01□□□□□ -0.49
NCKAP1L-202ENST00000545638 ABCF1Q8NE71 845 aaKnown RBP eCLIP12□□□□□ -0.49
NCKAP1L-202ENST00000545638 ADGRF5Q8IZF2 1346 aa12□□□□□ -0.49
NCKAP1L-202ENST00000545638 MAPKBP1O60336 1514 aa12□□□□□ -0.49
NCKAP1L-202ENST00000545638 ABCC1P33527 1531 aa11.99□□□□□ -0.49
NCKAP1L-202ENST00000545638 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
NCKAP1L-202ENST00000545638 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
NCKAP1L-202ENST00000545638 ATP10AO60312 1499 aa11.99□□□□□ -0.49
NCKAP1L-202ENST00000545638 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
NCKAP1L-202ENST00000545638 FAM135AQ9P2D6 1515 aa11.99□□□□□ -0.49
NCKAP1L-202ENST00000545638 NEFLP07196 543 aa11.98□□□□□ -0.49
NCKAP1L-202ENST00000545638 KDM6BO15054 1643 aa11.97□□□□□ -0.49
NCKAP1L-202ENST00000545638 ADGRL2O95490 1459 aa11.97□□□□□ -0.49
NCKAP1L-202ENST00000545638 ZMYM3Q14202 1370 aa11.97□□□□□ -0.49
NCKAP1L-202ENST00000545638 CDC42BPBQ9Y5S2 1711 aa11.97□□□□□ -0.49
NCKAP1L-202ENST00000545638 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
NCKAP1L-202ENST00000545638 EIF3AQ14152 1382 aaKnown RBP11.97□□□□□ -0.49
NCKAP1L-202ENST00000545638 ANKLE2Q86XL3 938 aa11.96□□□□□ -0.49
NCKAP1L-202ENST00000545638 NEFMP07197 916 aa11.96□□□□□ -0.5
NCKAP1L-202ENST00000545638 PZPP20742 1482 aa11.96□□□□□ -0.5
NCKAP1L-202ENST00000545638 PRAM1Q96QH2 718 aa11.96□□□□□ -0.5
NCKAP1L-202ENST00000545638 PPP6R1Q9UPN7 881 aa11.96□□□□□ -0.5
NCKAP1L-202ENST00000545638 CENPJQ9HC77 1338 aaPredicted RBP11.95□□□□□ -0.5
NCKAP1L-202ENST00000545638 HSPA2P54652 639 aa11.95□□□□□ -0.5
NCKAP1L-202ENST00000545638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.95□□□□□ -0.5
NCKAP1L-202ENST00000545638 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
NCKAP1L-202ENST00000545638 WDR43Q15061 677 aaKnown RBP eCLIP11.94□□□□□ -0.5
NCKAP1L-202ENST00000545638 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
NCKAP1L-202ENST00000545638 CABP2Q9NPB3 220 aa11.94□□□□□ -0.5
NCKAP1L-202ENST00000545638 ZFYVE16Q7Z3T8 1539 aa11.94□□□□□ -0.5
NCKAP1L-202ENST00000545638 PANK3Q9H999 370 aa11.94□□□□□ -0.5
NCKAP1L-202ENST00000545638 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
NCKAP1L-202ENST00000545638 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
NCKAP1L-202ENST00000545638 TNRQ92752 1358 aa11.93□□□□□ -0.5
NCKAP1L-202ENST00000545638 ABCA9Q8IUA7 1624 aa11.93□□□□□ -0.5
NCKAP1L-202ENST00000545638 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
NCKAP1L-202ENST00000545638 NOS1P29475 1434 aa11.92□□□□□ -0.5
NCKAP1L-202ENST00000545638 HDGFL2Q7Z4V5 671 aaPredicted RBP11.92□□□□□ -0.5
NCKAP1L-202ENST00000545638 MLH3Q9UHC1 1453 aa11.92□□□□□ -0.5
NCKAP1L-202ENST00000545638 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
NCKAP1L-202ENST00000545638 KIF7Q2M1P5 1343 aa11.91□□□□□ -0.5
NCKAP1L-202ENST00000545638 EVC2Q86UK5 1308 aa11.91□□□□□ -0.5
NCKAP1L-202ENST00000545638 RPGRIP1LQ68CZ1 1315 aa11.9□□□□□ -0.5
NCKAP1L-202ENST00000545638 CFAP74Q9C0B2 1584 aa11.9□□□□□ -0.5
NCKAP1L-202ENST00000545638 WASHC2AQ641Q2 1341 aa11.9□□□□□ -0.5
NCKAP1L-202ENST00000545638 NEUROD2Q15784 382 aa11.9□□□□□ -0.51
NCKAP1L-202ENST00000545638 PROSER2Q86WR7 435 aaPredicted RBP11.9□□□□□ -0.51
NCKAP1L-202ENST00000545638 U2SURPO15042 1029 aaKnown RBP11.88□□□□□ -0.51
NCKAP1L-202ENST00000545638 TERF2IPQ9NYB0 399 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms