RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 TRAK1Q9UPV9 953 aa11.34□□□□□ -0.59
CCDC7-210ENST00000545067 LAMC3Q9Y6N6 1575 aa11.34□□□□□ -0.59
CCDC7-210ENST00000545067 ADAMTS8Q9UP79 889 aa11.33□□□□□ -0.6
CCDC7-210ENST00000545067 C9orf84Q5VXU9 1444 aa11.33□□□□□ -0.6
CCDC7-210ENST00000545067 U2SURPO15042 1029 aaKnown RBP11.33□□□□□ -0.6
CCDC7-210ENST00000545067 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
CCDC7-210ENST00000545067 KIAA0586Q9BVV6 1533 aa11.32□□□□□ -0.6
CCDC7-210ENST00000545067 UGGT2Q9NYU1 1516 aa11.32□□□□□ -0.6
CCDC7-210ENST00000545067 APAF1O14727 1248 aa11.32□□□□□ -0.6
CCDC7-210ENST00000545067 PDE4AP27815 886 aa11.32□□□□□ -0.6
CCDC7-210ENST00000545067 CFAP43Q8NDM7 1665 aa11.32□□□□□ -0.6
CCDC7-210ENST00000545067 MORC1Q86VD1 984 aa11.32□□□□□ -0.6
CCDC7-210ENST00000545067 CLUAP1Q96AJ1 413 aa11.32□□□□□ -0.6
CCDC7-210ENST00000545067 BCL2L13Q9BXK5 485 aa11.32□□□□□ -0.6
CCDC7-210ENST00000545067 RPRD2Q5VT52 1461 aaKnown RBP11.32□□□□□ -0.6
CCDC7-210ENST00000545067 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
CCDC7-210ENST00000545067 GOLGA2Q08379 1002 aa11.31□□□□□ -0.6
CCDC7-210ENST00000545067 MAGI3Q5TCQ9 1506 aa11.31□□□□□ -0.6
CCDC7-210ENST00000545067 ROCK1Q13464 1354 aa11.3□□□□□ -0.6
CCDC7-210ENST00000545067 TCERG1O14776 1098 aaKnown RBP11.3□□□□□ -0.6
CCDC7-210ENST00000545067 CAMSAP2Q08AD1 1489 aa11.3□□□□□ -0.6
CCDC7-210ENST00000545067 IFT140Q96RY7 1462 aa11.3□□□□□ -0.6
CCDC7-210ENST00000545067 SPRYD3Q8NCJ5 442 aa11.28□□□□□ -0.6
CCDC7-210ENST00000545067 UPF2Q9HAU5 1272 aaKnown RBP11.28□□□□□ -0.6
CCDC7-210ENST00000545067 PDE3BQ13370 1112 aa11.28□□□□□ -0.6
CCDC7-210ENST00000545067 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.6
CCDC7-210ENST00000545067 CFAP70Q5T0N1 1121 aa11.27□□□□□ -0.6
CCDC7-210ENST00000545067 SRPK2P78362 688 aaKnown RBP11.27□□□□□ -0.61
CCDC7-210ENST00000545067 NUP153P49790 1475 aaKnown RBP11.27□□□□□ -0.61
CCDC7-210ENST00000545067 KANK1Q14678 1352 aa11.26□□□□□ -0.61
CCDC7-210ENST00000545067 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
CCDC7-210ENST00000545067 U2AF1L5P0DN76 240 aaPredicted RBP11.26□□□□□ -0.61
CCDC7-210ENST00000545067 U2AF1Q01081 240 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCDC7-210ENST00000545067 CFAP53Q96M91 514 aa11.26□□□□□ -0.61
CCDC7-210ENST00000545067 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
CCDC7-210ENST00000545067 MLECQ14165 292 aa11.26□□□□□ -0.61
CCDC7-210ENST00000545067 FTSJ3Q8IY81 847 aaKnown RBP11.26□□□□□ -0.61
CCDC7-210ENST00000545067 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
CCDC7-210ENST00000545067 TMEM132EQ6IEE7 984 aa11.25□□□□□ -0.61
CCDC7-210ENST00000545067 POGKQ9P215 609 aa11.25□□□□□ -0.61
CCDC7-210ENST00000545067 BRD4O60885 1362 aaPredicted RBP11.25□□□□□ -0.61
CCDC7-210ENST00000545067 EIF5BO60841 1220 aaKnown RBP11.25□□□□□ -0.61
CCDC7-210ENST00000545067 GPATCH8Q9UKJ3 1502 aaKnown RBP11.25□□□□□ -0.61
CCDC7-210ENST00000545067 KDM6BO15054 1643 aa11.25□□□□□ -0.61
CCDC7-210ENST00000545067 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
CCDC7-210ENST00000545067 ARID4BQ4LE39 1312 aaPredicted RBP11.24□□□□□ -0.61
CCDC7-210ENST00000545067 COG6Q9Y2V7 657 aa11.24□□□□□ -0.61
CCDC7-210ENST00000545067 SMG6Q86US8 1419 aaKnown RBP11.24□□□□□ -0.61
CCDC7-210ENST00000545067 SLKQ9H2G2 1235 aaPredicted RBP11.23□□□□□ -0.61
CCDC7-210ENST00000545067 ARHGAP5Q13017 1502 aa11.23□□□□□ -0.61
CCDC7-210ENST00000545067 PPP2R1AP30153 589 aa11.23□□□□□ -0.61
CCDC7-210ENST00000545067 SOX12O15370 315 aa11.22□□□□□ -0.61
CCDC7-210ENST00000545067 HSP90AA1P07900 732 aaKnown RBP11.22□□□□□ -0.61
CCDC7-210ENST00000545067 ESF1Q9H501 851 aaKnown RBP11.22□□□□□ -0.61
CCDC7-210ENST00000545067 SYNJ2O15056 1496 aa11.22□□□□□ -0.61
CCDC7-210ENST00000545067 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.61
CCDC7-210ENST00000545067 MAPK8IP3Q9UPT6 1336 aa11.21□□□□□ -0.62
CCDC7-210ENST00000545067 WASHC2CQ9Y4E1 1318 aa11.21□□□□□ -0.62
CCDC7-210ENST00000545067 BCAR3O75815 825 aa11.2□□□□□ -0.62
CCDC7-210ENST00000545067 TCOF1Q13428 1488 aaKnown RBP11.2□□□□□ -0.62
CCDC7-210ENST00000545067 PANK1Q8TE04 598 aa11.19□□□□□ -0.62
CCDC7-210ENST00000545067 KIF21AQ7Z4S6 1674 aa11.19□□□□□ -0.62
CCDC7-210ENST00000545067 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
CCDC7-210ENST00000545067 SLC12A5Q9H2X9 1139 aa11.18□□□□□ -0.62
CCDC7-210ENST00000545067 WDR62O43379 1518 aa11.18□□□□□ -0.62
CCDC7-210ENST00000545067 DHX29Q7Z478 1369 aaKnown RBP11.18□□□□□ -0.62
CCDC7-210ENST00000545067 DISP3Q9P2K9 1392 aa11.18□□□□□ -0.62
CCDC7-210ENST00000545067 PZPP20742 1482 aa11.17□□□□□ -0.62
CCDC7-210ENST00000545067 SAMD9Q5K651 1589 aa11.17□□□□□ -0.62
CCDC7-210ENST00000545067 DISP1Q96F81 1524 aa11.17□□□□□ -0.62
CCDC7-210ENST00000545067 ATP10BO94823 1461 aa11.16□□□□□ -0.62
CCDC7-210ENST00000545067 PLEKHH2Q8IVE3 1493 aa11.16□□□□□ -0.62
CCDC7-210ENST00000545067 ABCA5Q8WWZ7 1642 aa11.16□□□□□ -0.62
CCDC7-210ENST00000545067 ELL2O00472 640 aaPredicted RBP11.16□□□□□ -0.62
CCDC7-210ENST00000545067 BECN1Q14457 450 aa11.16□□□□□ -0.62
CCDC7-210ENST00000545067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.16□□□□□ -0.62
CCDC7-210ENST00000545067 ERBINQ96RT1 1412 aa11.16□□□□□ -0.62
CCDC7-210ENST00000545067 TEX14Q8IWB6 1497 aa11.15□□□□□ -0.62
CCDC7-210ENST00000545067 CENPQQ7L2Z9 268 aaPredicted RBP11.15□□□□□ -0.62
CCDC7-210ENST00000545067 EIF3AQ14152 1382 aaKnown RBP11.15□□□□□ -0.62
CCDC7-210ENST00000545067 NUTM2FA1L443 756 aa11.15□□□□□ -0.62
CCDC7-210ENST00000545067 RAPGEF6Q8TEU7 1601 aa11.14□□□□□ -0.63
CCDC7-210ENST00000545067 MINK1Q8N4C8 1332 aaPredicted RBP11.14□□□□□ -0.63
CCDC7-210ENST00000545067 ITPRIPQ8IWB1 547 aa11.14□□□□□ -0.63
CCDC7-210ENST00000545067 BACH2Q9BYV9 841 aa11.14□□□□□ -0.63
CCDC7-210ENST00000545067 SMC4Q9NTJ3 1288 aa11.14□□□□□ -0.63
CCDC7-210ENST00000545067 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
CCDC7-210ENST00000545067 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
CCDC7-210ENST00000545067 ADAMTS12P58397 1594 aa11.13□□□□□ -0.63
CCDC7-210ENST00000545067 MTHFSP49914 203 aa11.13□□□□□ -0.63
CCDC7-210ENST00000545067 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
CCDC7-210ENST00000545067 E9PSI1 815 aa11.13□□□□□ -0.63
CCDC7-210ENST00000545067 GGNBP2Q9H3C7 697 aa11.13□□□□□ -0.63
CCDC7-210ENST00000545067 CCDC141Q6ZP82 1450 aa11.13□□□□□ -0.63
CCDC7-210ENST00000545067 DENND4BO75064 1496 aaPredicted RBP11.13□□□□□ -0.63
CCDC7-210ENST00000545067 APBB1O00213 710 aa11.13□□□□□ -0.63
CCDC7-210ENST00000545067 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
CCDC7-210ENST00000545067 KIAA0556O60303 1618 aa11.12□□□□□ -0.63
CCDC7-210ENST00000545067 TESK2Q96S53 571 aa11.12□□□□□ -0.63
CCDC7-210ENST00000545067 TCP11L2Q8N4U5 519 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms