RNA–Protein interactions for RNA: ENST00000545051.2

SMAD7-202, Transcript of SMAD family member 7, humanhuman

TSL 2

Gene SMAD7, Length 2,211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-202ENST00000545051 SMG6Q86US8 1419 aaKnown RBP19.62■□□□□ 0.73
SMAD7-202ENST00000545051 ANKRD30AQ9BXX3 1397 aa19.61■□□□□ 0.73
SMAD7-202ENST00000545051 FANCAO15360 1455 aa19.61■□□□□ 0.73
SMAD7-202ENST00000545051 PREX2Q70Z35 1606 aa19.61■□□□□ 0.73
SMAD7-202ENST00000545051 EFCAB2Q5VUJ9 269 aa19.6■□□□□ 0.73
SMAD7-202ENST00000545051 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
SMAD7-202ENST00000545051 CDC42BPAQ5VT25 1732 aa19.59■□□□□ 0.73
SMAD7-202ENST00000545051 RALGAPBQ86X10 1494 aa19.59■□□□□ 0.73
SMAD7-202ENST00000545051 SHANK2Q9UPX8 1470 aa19.59■□□□□ 0.73
SMAD7-202ENST00000545051 ARHGEF12Q9NZN5 1544 aa19.59■□□□□ 0.73
SMAD7-202ENST00000545051 ERICH6Q7L0X2 663 aa19.59■□□□□ 0.73
SMAD7-202ENST00000545051 UHRF1BP1Q6BDS2 1440 aa19.59■□□□□ 0.73
SMAD7-202ENST00000545051 CDC42BPBQ9Y5S2 1711 aa19.58■□□□□ 0.72
SMAD7-202ENST00000545051 ROCK2O75116 1388 aaKnown RBP19.58■□□□□ 0.72
SMAD7-202ENST00000545051 KDM5DQ9BY66 1539 aa19.57■□□□□ 0.72
SMAD7-202ENST00000545051 ANKRD50Q9ULJ7 1429 aa19.57■□□□□ 0.72
SMAD7-202ENST00000545051 B4GALNT3Q6L9W6 998 aa19.55■□□□□ 0.72
SMAD7-202ENST00000545051 PKD2Q13563 968 aa19.54■□□□□ 0.72
SMAD7-202ENST00000545051 NUDCQ9Y266 331 aa19.52■□□□□ 0.72
SMAD7-202ENST00000545051 ADGRL1O94910 1474 aa19.52■□□□□ 0.71
SMAD7-202ENST00000545051 E9PCH4 1651 aa19.51■□□□□ 0.71
SMAD7-202ENST00000545051 ZNF777Q9ULD5 760 aaPredicted RBP19.51■□□□□ 0.71
SMAD7-202ENST00000545051 ZNF326Q5BKZ1 582 aaKnown RBP19.5■□□□□ 0.71
SMAD7-202ENST00000545051 C9orf84Q5VXU9 1444 aa19.5■□□□□ 0.71
SMAD7-202ENST00000545051 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
SMAD7-202ENST00000545051 COL17A1Q9UMD9 1497 aaPredicted RBP19.49■□□□□ 0.71
SMAD7-202ENST00000545051 SCAPERQ9BY12 1400 aa19.48■□□□□ 0.71
SMAD7-202ENST00000545051 BCL11AQ9H165 835 aa19.48■□□□□ 0.71
SMAD7-202ENST00000545051 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
SMAD7-202ENST00000545051 POLR3GLQ9BT43 218 aa19.47■□□□□ 0.71
SMAD7-202ENST00000545051 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
SMAD7-202ENST00000545051 KIF15Q9NS87 1388 aa19.47■□□□□ 0.71
SMAD7-202ENST00000545051 ARHGEF5Q12774 1597 aa19.46■□□□□ 0.71
SMAD7-202ENST00000545051 ABCC1P33527 1531 aa19.46■□□□□ 0.71
SMAD7-202ENST00000545051 SAMD9LQ8IVG5 1584 aa19.46■□□□□ 0.71
SMAD7-202ENST00000545051 NUP155O75694 1391 aa19.45■□□□□ 0.7
SMAD7-202ENST00000545051 RICTORQ6R327 1708 aa19.43■□□□□ 0.7
SMAD7-202ENST00000545051 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
SMAD7-202ENST00000545051 MYT1LQ9UL68 1186 aa19.43■□□□□ 0.7
SMAD7-202ENST00000545051 POGZQ7Z3K3 1410 aa19.43■□□□□ 0.7
SMAD7-202ENST00000545051 PNISRQ8TF01 805 aaKnown RBP19.43■□□□□ 0.7
SMAD7-202ENST00000545051 CARD11Q9BXL7 1154 aa19.43■□□□□ 0.7
SMAD7-202ENST00000545051 TMC1Q8TDI8 760 aa19.41■□□□□ 0.7
SMAD7-202ENST00000545051 ZNF518AQ6AHZ1 1483 aa19.41■□□□□ 0.7
SMAD7-202ENST00000545051 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
SMAD7-202ENST00000545051 LRPPRCP42704 1394 aaKnown RBP19.41■□□□□ 0.7
SMAD7-202ENST00000545051 FRMPD1Q5SYB0 1578 aa19.41■□□□□ 0.7
SMAD7-202ENST00000545051 SYCP2Q9BX26 1530 aa19.4■□□□□ 0.7
SMAD7-202ENST00000545051 CNGB1Q14028 1251 aaPredicted RBP19.39■□□□□ 0.69
SMAD7-202ENST00000545051 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.69
SMAD7-202ENST00000545051 TRPM1Q7Z4N2 1603 aa19.38■□□□□ 0.69
SMAD7-202ENST00000545051 MYBBP1AQ9BQG0 1328 aaKnown RBP19.38■□□□□ 0.69
SMAD7-202ENST00000545051 ZMYM4Q5VZL5 1548 aa19.38■□□□□ 0.69
SMAD7-202ENST00000545051 TSPY4P0CV99 314 aa19.37■□□□□ 0.69
SMAD7-202ENST00000545051 TSPY10P0CW01 314 aa19.37■□□□□ 0.69
SMAD7-202ENST00000545051 RALBP1Q15311 655 aa19.37■□□□□ 0.69
SMAD7-202ENST00000545051 HNRNPMP52272 730 aaKnown RBP eCLIP19.37■□□□□ 0.692e-6■■□□□ 12.3
SMAD7-202ENST00000545051 MAGI2Q86UL8 1455 aa19.36■□□□□ 0.69
SMAD7-202ENST00000545051 RSPH4AQ5TD94 716 aa19.36■□□□□ 0.69
SMAD7-202ENST00000545051 FAM135AQ9P2D6 1515 aa19.36■□□□□ 0.69
SMAD7-202ENST00000545051 TRAPPC8Q9Y2L5 1435 aa19.36■□□□□ 0.69
SMAD7-202ENST00000545051 CCDC141Q6ZP82 1450 aa19.35■□□□□ 0.69
SMAD7-202ENST00000545051 AFAP1Q8N556 730 aa19.35■□□□□ 0.69
SMAD7-202ENST00000545051 LAMC1P11047 1609 aa19.34■□□□□ 0.69
SMAD7-202ENST00000545051 ST20-MTHFSA0A0A6YYL1 179 aa19.33■□□□□ 0.69
SMAD7-202ENST00000545051 NOP58Q9Y2X3 529 aaKnown RBP19.33■□□□□ 0.68
SMAD7-202ENST00000545051 ZFYVE16Q7Z3T8 1539 aa19.32■□□□□ 0.68
SMAD7-202ENST00000545051 HECW2Q9P2P5 1572 aa19.32■□□□□ 0.68
SMAD7-202ENST00000545051 UNC13BO14795 1591 aa19.32■□□□□ 0.68
SMAD7-202ENST00000545051 DCAF11Q8TEB1 546 aa19.31■□□□□ 0.68
SMAD7-202ENST00000545051 MLH3Q9UHC1 1453 aa19.31■□□□□ 0.68
SMAD7-202ENST00000545051 KDM2AQ9Y2K7 1162 aa19.3■□□□□ 0.68
SMAD7-202ENST00000545051 SPAG9O60271 1321 aaKnown RBP19.3■□□□□ 0.68
SMAD7-202ENST00000545051 PRAG1Q86YV5 1406 aa19.3■□□□□ 0.68
SMAD7-202ENST00000545051 ARHGEF40Q8TER5 1519 aa19.3■□□□□ 0.68
SMAD7-202ENST00000545051 MAST1Q9Y2H9 1570 aa19.3■□□□□ 0.68
SMAD7-202ENST00000545051 CCDC144AA2RUR9 1427 aa19.28■□□□□ 0.68
SMAD7-202ENST00000545051 PARD3Q8TEW0 1356 aa19.28■□□□□ 0.68
SMAD7-202ENST00000545051 EIF2AK4Q9P2K8 1649 aaKnown RBP19.27■□□□□ 0.68
SMAD7-202ENST00000545051 ANP32AP39687 249 aaKnown RBP19.27■□□□□ 0.67
SMAD7-202ENST00000545051 PRDM15P57071 1507 aaPredicted RBP19.25■□□□□ 0.67
SMAD7-202ENST00000545051 NLRP13Q86W25 1043 aa19.25■□□□□ 0.67
SMAD7-202ENST00000545051 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
SMAD7-202ENST00000545051 ATP7AQ04656 1500 aa19.25■□□□□ 0.67
SMAD7-202ENST00000545051 RRP1P56182 461 aaKnown RBP19.25■□□□□ 0.67
SMAD7-202ENST00000545051 RTEL1-TNFRSF6BF6WH68 1400 aa19.25■□□□□ 0.67
SMAD7-202ENST00000545051 KIDINS220Q9ULH0 1771 aa19.25■□□□□ 0.67
SMAD7-202ENST00000545051 INO80Q9ULG1 1556 aaPredicted RBP19.25■□□□□ 0.67
SMAD7-202ENST00000545051 GPRASP1Q5JY77 1395 aa19.25■□□□□ 0.67
SMAD7-202ENST00000545051 IQGAP3Q86VI3 1631 aa19.24■□□□□ 0.67
SMAD7-202ENST00000545051 ATP10AO60312 1499 aa19.24■□□□□ 0.67
SMAD7-202ENST00000545051 PLXNC1O60486 1568 aa19.24■□□□□ 0.67
SMAD7-202ENST00000545051 PDE3BQ13370 1112 aa19.24■□□□□ 0.67
SMAD7-202ENST00000545051 INSRP06213 1382 aa19.22■□□□□ 0.67
SMAD7-202ENST00000545051 DIP2CQ9Y2E4 1556 aa19.22■□□□□ 0.67
SMAD7-202ENST00000545051 ABCA6Q8N139 1617 aa19.22■□□□□ 0.67
SMAD7-202ENST00000545051 IPO9Q96P70 1041 aaKnown RBP19.21■□□□□ 0.67
SMAD7-202ENST00000545051 A2MP01023 1474 aa19.21■□□□□ 0.67
SMAD7-202ENST00000545051 SENP3-EIF4A1A0A087X0R7 540 aa19.2■□□□□ 0.66
SMAD7-202ENST00000545051 RCAN3Q9UKA8 241 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 300.5 ms