RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 NBR1Q14596 966 aa12.99□□□□□ -0.33
DDX47-211ENST00000544497 THSD4Q6ZMP0 1018 aa12.99□□□□□ -0.33
DDX47-211ENST00000544497 TPRNQ4KMQ1 711 aa12.98□□□□□ -0.33
DDX47-211ENST00000544497 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
DDX47-211ENST00000544497 GOLGA8CPA6NN73 597 aa12.97□□□□□ -0.33
DDX47-211ENST00000544497 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
DDX47-211ENST00000544497 CADPS2Q86UW7 1296 aa12.95□□□□□ -0.34
DDX47-211ENST00000544497 WNT2BQ93097 391 aa12.95□□□□□ -0.34
DDX47-211ENST00000544497 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
DDX47-211ENST00000544497 PCDHGA10Q9Y5H3 936 aa12.94□□□□□ -0.34
DDX47-211ENST00000544497 IFFO2Q5TF58 517 aa12.9□□□□□ -0.34
DDX47-211ENST00000544497 TYW1BQ6NUM6 668 aa12.9□□□□□ -0.34
DDX47-211ENST00000544497 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
DDX47-211ENST00000544497 PHF14O94880 888 aa12.89□□□□□ -0.35
DDX47-211ENST00000544497 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
DDX47-211ENST00000544497 COL9A1P20849 921 aa12.87□□□□□ -0.35
DDX47-211ENST00000544497 CAMK2BQ13554 666 aa12.86□□□□□ -0.35
DDX47-211ENST00000544497 PROX2Q3B8N5 592 aa12.86□□□□□ -0.35
DDX47-211ENST00000544497 RGS20O76081 388 aa12.82□□□□□ -0.36
DDX47-211ENST00000544497 ANKK1Q8NFD2 765 aa12.82□□□□□ -0.36
DDX47-211ENST00000544497 EPAS1Q99814 870 aa12.82□□□□□ -0.36
DDX47-211ENST00000544497 DPYSL4O14531 572 aa12.81□□□□□ -0.36
DDX47-211ENST00000544497 A0A0G2JS52 829 aa12.8□□□□□ -0.36
DDX47-211ENST00000544497 LAPTM4BQ86VI4 370 aa12.79□□□□□ -0.36
DDX47-211ENST00000544497 ONECUT3O60422 494 aaPredicted RBP12.77□□□□□ -0.37
DDX47-211ENST00000544497 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
DDX47-211ENST00000544497 KIAA1468Q9P260 1216 aa12.76□□□□□ -0.37
DDX47-211ENST00000544497 WDR70Q9NW82 654 aa12.75□□□□□ -0.37
DDX47-211ENST00000544497 SOWAHBA6NEL2 793 aa12.74□□□□□ -0.37
DDX47-211ENST00000544497 BCAMP50895 628 aa12.74□□□□□ -0.37
DDX47-211ENST00000544497 ZFRQ96KR1 1074 aaKnown RBP12.73□□□□□ -0.37
DDX47-211ENST00000544497 ITGBL1O95965 494 aaPredicted RBP12.72□□□□□ -0.37
DDX47-211ENST00000544497 P3H3Q8IVL6 736 aa12.72□□□□□ -0.37
DDX47-211ENST00000544497 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
DDX47-211ENST00000544497 DDX12PQ92771 950 aa12.71□□□□□ -0.37
DDX47-211ENST00000544497 RBM33Q96EV2 1170 aaKnown RBP12.71□□□□□ -0.37
DDX47-211ENST00000544497 NYAP1Q6ZVC0 841 aa12.7□□□□□ -0.38
DDX47-211ENST00000544497 SEPT9Q9UHD8 586 aaPredicted RBP12.7□□□□□ -0.38
DDX47-211ENST00000544497 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
DDX47-211ENST00000544497 EN1Q05925 392 aaPredicted RBP12.66□□□□□ -0.38
DDX47-211ENST00000544497 PDIA6Q15084 440 aa12.66□□□□□ -0.38
DDX47-211ENST00000544497 IRX2Q9BZI1 471 aaPredicted RBP12.65□□□□□ -0.38
DDX47-211ENST00000544497 WBP1LQ9NX94 342 aa12.65□□□□□ -0.38
DDX47-211ENST00000544497 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
DDX47-211ENST00000544497 MAP3K7O43318 606 aa12.62□□□□□ -0.39
DDX47-211ENST00000544497 KCNV2Q8TDN2 545 aa12.62□□□□□ -0.39
DDX47-211ENST00000544497 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.62□□□□□ -0.39
DDX47-211ENST00000544497 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
DDX47-211ENST00000544497 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
DDX47-211ENST00000544497 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
DDX47-211ENST00000544497 TSKSQ9UJT2 592 aa12.6□□□□□ -0.39
DDX47-211ENST00000544497 KCNC4Q03721 635 aa12.59□□□□□ -0.39
DDX47-211ENST00000544497 PACS2Q86VP3 889 aa12.59□□□□□ -0.39
DDX47-211ENST00000544497 HPS5Q9UPZ3 1129 aa12.59□□□□□ -0.39
DDX47-211ENST00000544497 E2F4Q16254 413 aa12.55□□□□□ -0.4
DDX47-211ENST00000544497 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
DDX47-211ENST00000544497 NISCHQ9Y2I1 1504 aa12.53□□□□□ -0.4
DDX47-211ENST00000544497 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
DDX47-211ENST00000544497 CERKQ8TCT0 537 aa12.52□□□□□ -0.41
DDX47-211ENST00000544497 PRSS12P56730 875 aa12.51□□□□□ -0.41
DDX47-211ENST00000544497 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
DDX47-211ENST00000544497 GRXCR2A6NFK2 248 aa12.49□□□□□ -0.41
DDX47-211ENST00000544497 FAM198AQ9UFP1 575 aa12.49□□□□□ -0.41
DDX47-211ENST00000544497 SMAPO00193 183 aa12.48□□□□□ -0.41
DDX47-211ENST00000544497 PPP4CP60510 307 aa12.48□□□□□ -0.41
DDX47-211ENST00000544497 SAMD7Q7Z3H4 446 aa12.47□□□□□ -0.41
DDX47-211ENST00000544497 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
DDX47-211ENST00000544497 TULP1O00294 542 aaPredicted RBP12.46□□□□□ -0.41
DDX47-211ENST00000544497 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
DDX47-211ENST00000544497 LMOD2Q6P5Q4 547 aa12.44□□□□□ -0.42
DDX47-211ENST00000544497 TATDN2Q93075 761 aa12.44□□□□□ -0.42
DDX47-211ENST00000544497 PNMA3Q9UL41 463 aa12.44□□□□□ -0.42
DDX47-211ENST00000544497 C3orf80F5H4A9 247 aa12.43□□□□□ -0.42
DDX47-211ENST00000544497 OSBPP22059 807 aa12.42□□□□□ -0.42
DDX47-211ENST00000544497 CDHR5Q9HBB8 845 aa12.42□□□□□ -0.42
DDX47-211ENST00000544497 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
DDX47-211ENST00000544497 TJAP1Q5JTD0 557 aa12.41□□□□□ -0.42
DDX47-211ENST00000544497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.41□□□□□ -0.42
DDX47-211ENST00000544497 Q6ZNB5 142 aa12.38□□□□□ -0.43
DDX47-211ENST00000544497 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
DDX47-211ENST00000544497 MTRQ99707 1265 aa12.37□□□□□ -0.43
DDX47-211ENST00000544497 IL21Q9HBE4 155 aa12.36□□□□□ -0.43
DDX47-211ENST00000544497 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
DDX47-211ENST00000544497 SEMA3EO15041 775 aa12.34□□□□□ -0.43
DDX47-211ENST00000544497 RNF40O75150 1001 aa12.34□□□□□ -0.43
DDX47-211ENST00000544497 LAPTM4AQ15012 233 aa12.33□□□□□ -0.44
DDX47-211ENST00000544497 TTC13Q8NBP0 860 aa12.33□□□□□ -0.44
DDX47-211ENST00000544497 PADI6Q6TGC4 694 aa12.31□□□□□ -0.44
DDX47-211ENST00000544497 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
DDX47-211ENST00000544497 TESPA1A2RU30 521 aaPredicted RBP12.3□□□□□ -0.44
DDX47-211ENST00000544497 APLP1P51693 650 aa12.3□□□□□ -0.44
DDX47-211ENST00000544497 NECTIN2Q92692 538 aa12.3□□□□□ -0.44
DDX47-211ENST00000544497 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
DDX47-211ENST00000544497 ZNF516Q92618 1163 aa12.28□□□□□ -0.44
DDX47-211ENST00000544497 PRKD2Q9BZL6 878 aa12.28□□□□□ -0.44
DDX47-211ENST00000544497 SWT1Q5T5J6 900 aaKnown RBP12.27□□□□□ -0.45
DDX47-211ENST00000544497 SMYD5Q6GMV2 418 aa12.26□□□□□ -0.45
DDX47-211ENST00000544497 SLF2Q8IX21 1173 aa12.26□□□□□ -0.45
DDX47-211ENST00000544497 GFRA3O60609 400 aa12.25□□□□□ -0.45
DDX47-211ENST00000544497 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms