RNA–Protein interactions for RNA: ENST00000544304.5

RAB35-206, Transcript of RAB35, member RAS oncogene family, human

TSL 2

Gene RAB35, Length 2,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB35-206	ENST00000544304	CCDC141	Q6ZP82	1450 aa		29.01	■■■□□ 2.23
RAB35-206	ENST00000544304	RALBP1	Q15311	655 aa		29	■■■□□ 2.23
RAB35-206	ENST00000544304	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.98	■■■□□ 2.23
RAB35-206	ENST00000544304	ERICH6	Q7L0X2	663 aa		28.98	■■■□□ 2.23
RAB35-206	ENST00000544304	FAM135A	Q9P2D6	1515 aa		28.97	■■■□□ 2.23
RAB35-206	ENST00000544304	KTN1	Q86UP2	1357 aa	Known RBP	28.97	■■■□□ 2.23
RAB35-206	ENST00000544304	BRD4	O60885	1362 aa	Predicted RBP	28.96	■■■□□ 2.23
RAB35-206	ENST00000544304	CCDC144A	A2RUR9	1427 aa		28.95	■■■□□ 2.22
RAB35-206	ENST00000544304	SAMD9L	Q8IVG5	1584 aa		28.94	■■■□□ 2.22
RAB35-206	ENST00000544304	LRPPRC	P42704	1394 aa	Known RBP	28.94	■■■□□ 2.22
RAB35-206	ENST00000544304	RGL3	Q3MIN7	710 aa		28.93	■■■□□ 2.22
RAB35-206	ENST00000544304	CCDC136	Q96JN2	1154 aa		28.92	■■■□□ 2.22
RAB35-206	ENST00000544304	PRAG1	Q86YV5	1406 aa		28.9	■■■□□ 2.22
RAB35-206	ENST00000544304	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.9	■■■□□ 2.22	1e-6	■■□□□ 12.2
RAB35-206	ENST00000544304	CDC42BPB	Q9Y5S2	1711 aa		28.88	■■■□□ 2.21
RAB35-206	ENST00000544304	PREX2	Q70Z35	1606 aa		28.88	■■■□□ 2.21
RAB35-206	ENST00000544304	NBPF1	Q3BBV0	1214 aa		28.88	■■■□□ 2.21
RAB35-206	ENST00000544304	NLRP13	Q86W25	1043 aa		28.84	■■■□□ 2.21
RAB35-206	ENST00000544304	SYCP2	Q9BX26	1530 aa		28.84	■■■□□ 2.21
RAB35-206	ENST00000544304	PLA2R1	Q13018	1463 aa		28.82	■■■□□ 2.2
RAB35-206	ENST00000544304	ARHGAP5	Q13017	1502 aa		28.82	■■■□□ 2.2
RAB35-206	ENST00000544304		E9PCH4	1651 aa		28.8	■■■□□ 2.2
RAB35-206	ENST00000544304	TRPM1	Q7Z4N2	1603 aa		28.79	■■■□□ 2.2
RAB35-206	ENST00000544304	PARD3	Q8TEW0	1356 aa		28.79	■■■□□ 2.2
RAB35-206	ENST00000544304	GPRASP1	Q5JY77	1395 aa		28.79	■■■□□ 2.2
RAB35-206	ENST00000544304	PER1	O15534	1290 aa	Predicted RBP	28.79	■■■□□ 2.2
RAB35-206	ENST00000544304	A2M	P01023	1474 aa		28.77	■■■□□ 2.2
RAB35-206	ENST00000544304	SALL2	Q9Y467	1007 aa	Predicted RBP	28.76	■■■□□ 2.19
RAB35-206	ENST00000544304	MAST1	Q9Y2H9	1570 aa		28.75	■■■□□ 2.19
RAB35-206	ENST00000544304	UNC13B	O14795	1591 aa		28.75	■■■□□ 2.19
RAB35-206	ENST00000544304	TTC37	Q6PGP7	1564 aa		28.75	■■■□□ 2.19
RAB35-206	ENST00000544304	PLEKHH2	Q8IVE3	1493 aa		28.75	■■■□□ 2.19
RAB35-206	ENST00000544304	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.74	■■■□□ 2.19	6e-7	■■■■■ 27.3
RAB35-206	ENST00000544304	TESK2	Q96S53	571 aa		28.73	■■■□□ 2.19
RAB35-206	ENST00000544304	RRP1	P56182	461 aa	Known RBP	28.72	■■■□□ 2.19
RAB35-206	ENST00000544304	RCAN3	Q9UKA8	241 aa		28.71	■■■□□ 2.19
RAB35-206	ENST00000544304	WASHC2C	Q9Y4E1	1318 aa		28.71	■■■□□ 2.19
RAB35-206	ENST00000544304	CC2D1B	Q5T0F9	858 aa	Known RBP	28.7	■■■□□ 2.19
RAB35-206	ENST00000544304	PDE3B	Q13370	1112 aa		28.7	■■■□□ 2.18
RAB35-206	ENST00000544304	DISP3	Q9P2K9	1392 aa		28.7	■■■□□ 2.18
RAB35-206	ENST00000544304	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.69	■■■□□ 2.18
RAB35-206	ENST00000544304	PANK3	Q9H999	370 aa		28.68	■■■□□ 2.18
RAB35-206	ENST00000544304	TMF1	P82094	1093 aa		28.67	■■■□□ 2.18
RAB35-206	ENST00000544304	PRDM15	P57071	1507 aa	Predicted RBP	28.66	■■■□□ 2.18
RAB35-206	ENST00000544304	ERBIN	Q96RT1	1412 aa		28.66	■■■□□ 2.18
RAB35-206	ENST00000544304	IQGAP3	Q86VI3	1631 aa		28.66	■■■□□ 2.18
RAB35-206	ENST00000544304	PLXNC1	O60486	1568 aa		28.65	■■■□□ 2.18
RAB35-206	ENST00000544304	DUOX2	Q9NRD8	1548 aa		28.64	■■■□□ 2.18
RAB35-206	ENST00000544304	EXOC6	Q8TAG9	804 aa		28.63	■■■□□ 2.17
RAB35-206	ENST00000544304	NOP58	Q9Y2X3	529 aa	Known RBP	28.63	■■■□□ 2.17
RAB35-206	ENST00000544304	ATP10A	O60312	1499 aa		28.63	■■■□□ 2.17
RAB35-206	ENST00000544304	LAMC1	P11047	1609 aa		28.62	■■■□□ 2.17
RAB35-206	ENST00000544304	ABCC2	Q92887	1545 aa		28.61	■■■□□ 2.17
RAB35-206	ENST00000544304	EFCAB2	Q5VUJ9	269 aa		28.6	■■■□□ 2.17
RAB35-206	ENST00000544304	CDCA7L	Q96GN5	454 aa		28.6	■■■□□ 2.17
RAB35-206	ENST00000544304	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.6	■■■□□ 2.17
RAB35-206	ENST00000544304	MYO5C	Q9NQX4	1742 aa		28.59	■■■□□ 2.17
RAB35-206	ENST00000544304	CHD1	O14646	1710 aa		28.59	■■■□□ 2.17
RAB35-206	ENST00000544304	ANP32A	P39687	249 aa	Known RBP	28.58	■■■□□ 2.17
RAB35-206	ENST00000544304	SHROOM2	Q13796	1616 aa		28.58	■■■□□ 2.17
RAB35-206	ENST00000544304	PLCH2	O75038	1416 aa		28.57	■■■□□ 2.16
RAB35-206	ENST00000544304	MAGI2	Q86UL8	1455 aa		28.57	■■■□□ 2.16
RAB35-206	ENST00000544304	ERCC6L2	Q5T890	1561 aa		28.55	■■■□□ 2.16
RAB35-206	ENST00000544304	BCL11A	Q9H165	835 aa		28.54	■■■□□ 2.16
RAB35-206	ENST00000544304	INSR	P06213	1382 aa		28.54	■■■□□ 2.16
RAB35-206	ENST00000544304	PAK3	O75914	559 aa	Predicted RBP	28.53	■■■□□ 2.16
RAB35-206	ENST00000544304	IPO9	Q96P70	1041 aa	Known RBP	28.52	■■■□□ 2.16
RAB35-206	ENST00000544304	BLM	P54132	1417 aa	Predicted RBP	28.51	■■■□□ 2.15
RAB35-206	ENST00000544304	MYT1L	Q9UL68	1186 aa		28.51	■■■□□ 2.15
RAB35-206	ENST00000544304	TRAPPC8	Q9Y2L5	1435 aa		28.48	■■■□□ 2.15
RAB35-206	ENST00000544304	ZMYM4	Q5VZL5	1548 aa		28.48	■■■□□ 2.15
RAB35-206	ENST00000544304	TCERG1	O14776	1098 aa	Known RBP	28.47	■■■□□ 2.15
RAB35-206	ENST00000544304	KNSTRN	Q9Y448	316 aa		28.46	■■■□□ 2.15
RAB35-206	ENST00000544304	SPAG9	O60271	1321 aa	Known RBP	28.45	■■■□□ 2.14
RAB35-206	ENST00000544304	PLIN1	O60240	522 aa		28.44	■■■□□ 2.14
RAB35-206	ENST00000544304	ADAMTS8	Q9UP79	889 aa		28.44	■■■□□ 2.14
RAB35-206	ENST00000544304	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.43	■■■□□ 2.14
RAB35-206	ENST00000544304	ABCC1	P33527	1531 aa		28.42	■■■□□ 2.14
RAB35-206	ENST00000544304	AFAP1	Q8N556	730 aa		28.42	■■■□□ 2.14
RAB35-206	ENST00000544304	RNF17	Q9BXT8	1623 aa	Known RBP	28.41	■■■□□ 2.14
RAB35-206	ENST00000544304	WDR7	Q9Y4E6	1490 aa		28.41	■■■□□ 2.14
RAB35-206	ENST00000544304	CDCA8	Q53HL2	280 aa		28.4	■■■□□ 2.14
RAB35-206	ENST00000544304	NBR1	Q14596	966 aa		28.39	■■■□□ 2.14
RAB35-206	ENST00000544304	PPP2R1A	P30153	589 aa		28.39	■■■□□ 2.13
RAB35-206	ENST00000544304	STAC3	Q96MF2	364 aa		28.38	■■■□□ 2.13
RAB35-206	ENST00000544304	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.38	■■■□□ 2.13
RAB35-206	ENST00000544304	WDR43	Q15061	677 aa	Known RBP eCLIP	28.37	■■■□□ 2.13
RAB35-206	ENST00000544304	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.37	■■■□□ 2.13
RAB35-206	ENST00000544304	PDE4A	P27815	886 aa		28.35	■■■□□ 2.13
RAB35-206	ENST00000544304	CRBN	Q96SW2	442 aa		28.35	■■■□□ 2.13
RAB35-206	ENST00000544304	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.35	■■■□□ 2.13
RAB35-206	ENST00000544304	MADD	Q8WXG6	1647 aa		28.35	■■■□□ 2.13
RAB35-206	ENST00000544304	UHRF1BP1L	A0JNW5	1464 aa		28.35	■■■□□ 2.13
RAB35-206	ENST00000544304	MS4A1	P11836	297 aa		28.34	■■■□□ 2.13
RAB35-206	ENST00000544304	SCAF11	Q99590	1463 aa	Known RBP	28.34	■■■□□ 2.13
RAB35-206	ENST00000544304	TRPM2	O94759	1503 aa		28.33	■■■□□ 2.13
RAB35-206	ENST00000544304	PTPRT	O14522	1441 aa		28.32	■■■□□ 2.12
RAB35-206	ENST00000544304	NPM2	Q86SE8	214 aa	Known RBP	28.32	■■■□□ 2.12
RAB35-206	ENST00000544304	SCAPER	Q9BY12	1400 aa		28.31	■■■□□ 2.12
RAB35-206	ENST00000544304	DEK	P35659	375 aa	Known RBP	28.3	■■■□□ 2.12

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