RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 UNC13BO14795 1591 aa17.49■□□□□ 0.39
PTCD2-212ENST00000543322 LAMC1P11047 1609 aa17.48■□□□□ 0.39
PTCD2-212ENST00000543322 MAST1Q9Y2H9 1570 aa17.48■□□□□ 0.39
PTCD2-212ENST00000543322 MYBBP1AQ9BQG0 1328 aaKnown RBP17.47■□□□□ 0.39
PTCD2-212ENST00000543322 TSPY4P0CV99 314 aa17.46■□□□□ 0.39
PTCD2-212ENST00000543322 TSPY10P0CW01 314 aa17.46■□□□□ 0.39
PTCD2-212ENST00000543322 RALBP1Q15311 655 aa17.45■□□□□ 0.38
PTCD2-212ENST00000543322 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
PTCD2-212ENST00000543322 PRAG1Q86YV5 1406 aa17.45■□□□□ 0.38
PTCD2-212ENST00000543322 ST20-MTHFSA0A0A6YYL1 179 aa17.45■□□□□ 0.38
PTCD2-212ENST00000543322 FBLN2P98095 1184 aa17.44■□□□□ 0.38
PTCD2-212ENST00000543322 BCL11AQ9H165 835 aa17.44■□□□□ 0.38
PTCD2-212ENST00000543322 CNGB1Q14028 1251 aaPredicted RBP17.43■□□□□ 0.38
PTCD2-212ENST00000543322 GPRASP1Q5JY77 1395 aa17.42■□□□□ 0.38
PTCD2-212ENST00000543322 PLXNC1O60486 1568 aa17.42■□□□□ 0.38
PTCD2-212ENST00000543322 PARD3Q8TEW0 1356 aa17.42■□□□□ 0.38
PTCD2-212ENST00000543322 IQGAP3Q86VI3 1631 aa17.41■□□□□ 0.38
PTCD2-212ENST00000543322 PRDM15P57071 1507 aaPredicted RBP17.41■□□□□ 0.38
PTCD2-212ENST00000543322 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
PTCD2-212ENST00000543322 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTCD2-212ENST00000543322 DCAF11Q8TEB1 546 aa17.41■□□□□ 0.38
PTCD2-212ENST00000543322 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
PTCD2-212ENST00000543322 COL17A1Q9UMD9 1497 aaPredicted RBP17.4■□□□□ 0.38
PTCD2-212ENST00000543322 SYCP2Q9BX26 1530 aa17.4■□□□□ 0.38
PTCD2-212ENST00000543322 KDM2AQ9Y2K7 1162 aa17.4■□□□□ 0.38
PTCD2-212ENST00000543322 EIF2AK4Q9P2K8 1649 aaKnown RBP17.39■□□□□ 0.38
PTCD2-212ENST00000543322 CCDC144AA2RUR9 1427 aa17.39■□□□□ 0.37
PTCD2-212ENST00000543322 TTC37Q6PGP7 1564 aa17.39■□□□□ 0.37
PTCD2-212ENST00000543322 A2MP01023 1474 aa17.38■□□□□ 0.37
PTCD2-212ENST00000543322 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
PTCD2-212ENST00000543322 RSPH4AQ5TD94 716 aa17.38■□□□□ 0.37
PTCD2-212ENST00000543322 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
PTCD2-212ENST00000543322 ZMYM4Q5VZL5 1548 aa17.38■□□□□ 0.37
PTCD2-212ENST00000543322 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
PTCD2-212ENST00000543322 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
PTCD2-212ENST00000543322 INSRP06213 1382 aa17.35■□□□□ 0.37
PTCD2-212ENST00000543322 MAGI2Q86UL8 1455 aa17.35■□□□□ 0.37
PTCD2-212ENST00000543322 NOP58Q9Y2X3 529 aaKnown RBP17.35■□□□□ 0.37
PTCD2-212ENST00000543322 ARHGAP5Q13017 1502 aa17.33■□□□□ 0.37
PTCD2-212ENST00000543322 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.33■□□□□ 0.37
PTCD2-212ENST00000543322 ATP10AO60312 1499 aa17.33■□□□□ 0.37
PTCD2-212ENST00000543322 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.37
PTCD2-212ENST00000543322 SHROOM2Q13796 1616 aa17.33■□□□□ 0.36
PTCD2-212ENST00000543322 PDE3BQ13370 1112 aa17.31■□□□□ 0.36
PTCD2-212ENST00000543322 PLEKHH2Q8IVE3 1493 aa17.31■□□□□ 0.36
PTCD2-212ENST00000543322 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
PTCD2-212ENST00000543322 PER1O15534 1290 aaPredicted RBP17.31■□□□□ 0.36
PTCD2-212ENST00000543322 WASHC2CQ9Y4E1 1318 aa17.3■□□□□ 0.36
PTCD2-212ENST00000543322 DUOX2Q9NRD8 1548 aa17.3■□□□□ 0.36
PTCD2-212ENST00000543322 SENP3-EIF4A1A0A087X0R7 540 aa17.3■□□□□ 0.36
PTCD2-212ENST00000543322 CHD1O14646 1710 aa17.29■□□□□ 0.36
PTCD2-212ENST00000543322 DISP3Q9P2K9 1392 aa17.29■□□□□ 0.36
PTCD2-212ENST00000543322 ERBINQ96RT1 1412 aa17.28■□□□□ 0.36
PTCD2-212ENST00000543322 NBPF1Q3BBV0 1214 aa17.28■□□□□ 0.36
PTCD2-212ENST00000543322 RCAN3Q9UKA8 241 aa17.28■□□□□ 0.36
PTCD2-212ENST00000543322 TESK2Q96S53 571 aa17.27■□□□□ 0.36
PTCD2-212ENST00000543322 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
PTCD2-212ENST00000543322 ABCC2Q92887 1545 aa17.26■□□□□ 0.35
PTCD2-212ENST00000543322 PAK3O75914 559 aaPredicted RBP17.26■□□□□ 0.35
PTCD2-212ENST00000543322 IPO9Q96P70 1041 aaKnown RBP17.25■□□□□ 0.35
PTCD2-212ENST00000543322 IQGAP1P46940 1657 aa17.24■□□□□ 0.35
PTCD2-212ENST00000543322 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
PTCD2-212ENST00000543322 MADDQ8WXG6 1647 aa17.23■□□□□ 0.35
PTCD2-212ENST00000543322 RGL3Q3MIN7 710 aa17.23■□□□□ 0.35
PTCD2-212ENST00000543322 ABCC1P33527 1531 aa17.2■□□□□ 0.34
PTCD2-212ENST00000543322 TCERG1O14776 1098 aaKnown RBP17.2■□□□□ 0.34
PTCD2-212ENST00000543322 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
PTCD2-212ENST00000543322 CEP152O94986 1710 aa17.19■□□□□ 0.34
PTCD2-212ENST00000543322 TMF1P82094 1093 aa17.18■□□□□ 0.34
PTCD2-212ENST00000543322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.34
PTCD2-212ENST00000543322 SYNMO15061 1565 aa17.18■□□□□ 0.34
PTCD2-212ENST00000543322 WDR7Q9Y4E6 1490 aa17.18■□□□□ 0.34
PTCD2-212ENST00000543322 PANK3Q9H999 370 aa17.18■□□□□ 0.34
PTCD2-212ENST00000543322 DEKP35659 375 aaKnown RBP17.17■□□□□ 0.34
PTCD2-212ENST00000543322 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
PTCD2-212ENST00000543322 TRPM2O94759 1503 aa17.17■□□□□ 0.34
PTCD2-212ENST00000543322 CDCA7LQ96GN5 454 aa17.16■□□□□ 0.34
PTCD2-212ENST00000543322 ERCC6L2Q5T890 1561 aa17.16■□□□□ 0.34
PTCD2-212ENST00000543322 PLCH2O75038 1416 aa17.16■□□□□ 0.34
PTCD2-212ENST00000543322 MS4A1P11836 297 aa17.16■□□□□ 0.34
PTCD2-212ENST00000543322 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
PTCD2-212ENST00000543322 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
PTCD2-212ENST00000543322 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.34
PTCD2-212ENST00000543322 CLASP1Q7Z460 1538 aa17.14■□□□□ 0.33
PTCD2-212ENST00000543322 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
PTCD2-212ENST00000543322 MYOM1P52179 1685 aa17.13■□□□□ 0.33
PTCD2-212ENST00000543322 SCAPERQ9BY12 1400 aa17.12■□□□□ 0.33
PTCD2-212ENST00000543322 NBR1Q14596 966 aa17.12■□□□□ 0.33
PTCD2-212ENST00000543322 CLTCL1P53675 1640 aa17.11■□□□□ 0.33
PTCD2-212ENST00000543322 KIAA1210Q9ULL0 1709 aa17.11■□□□□ 0.33
PTCD2-212ENST00000543322 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
PTCD2-212ENST00000543322 PDE4AP27815 886 aa17.11■□□□□ 0.33
PTCD2-212ENST00000543322 BACH2Q9BYV9 841 aa17.11■□□□□ 0.33
PTCD2-212ENST00000543322 ARAP3Q8WWN8 1544 aa17.1■□□□□ 0.33
PTCD2-212ENST00000543322 UHRF1BP1LA0JNW5 1464 aa17.1■□□□□ 0.33
PTCD2-212ENST00000543322 TET3O43151 1660 aa17.1■□□□□ 0.33
PTCD2-212ENST00000543322 PTPRTO14522 1441 aa17.1■□□□□ 0.33
PTCD2-212ENST00000543322 TRAPPC8Q9Y2L5 1435 aa17.1■□□□□ 0.33
PTCD2-212ENST00000543322 SCAF11Q99590 1463 aaKnown RBP17.1■□□□□ 0.33
PTCD2-212ENST00000543322 NEURL4Q96JN8 1562 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms