RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 TSPY10P0CW01 314 aa17.28■□□□□ 0.36
DDX11-223ENST00000542838 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
DDX11-223ENST00000542838 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.36
DDX11-223ENST00000542838 CEP170Q5SW79 1584 aa17.27■□□□□ 0.36
DDX11-223ENST00000542838 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.36
DDX11-223ENST00000542838 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.36
DDX11-223ENST00000542838 CARMIL2Q6F5E8 1435 aa17.27■□□□□ 0.35
DDX11-223ENST00000542838 RCAN3Q9UKA8 241 aa17.26■□□□□ 0.35
DDX11-223ENST00000542838 FBLN2P98095 1184 aa17.24■□□□□ 0.35
DDX11-223ENST00000542838 NLRP13Q86W25 1043 aa17.24■□□□□ 0.35
DDX11-223ENST00000542838 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
DDX11-223ENST00000542838 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
DDX11-223ENST00000542838 MAGI1Q96QZ7 1491 aaPredicted RBP17.23■□□□□ 0.35
DDX11-223ENST00000542838 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
DDX11-223ENST00000542838 PTPRGP23470 1445 aa17.22■□□□□ 0.35
DDX11-223ENST00000542838 TCERG1O14776 1098 aaKnown RBP17.22■□□□□ 0.35
DDX11-223ENST00000542838 HNRNPMP52272 730 aaKnown RBP eCLIP17.22■□□□□ 0.35
DDX11-223ENST00000542838 PDE3BQ13370 1112 aa17.22■□□□□ 0.35
DDX11-223ENST00000542838 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
DDX11-223ENST00000542838 NPM2Q86SE8 214 aaKnown RBP17.21■□□□□ 0.35
DDX11-223ENST00000542838 PARD3Q8TEW0 1356 aa17.21■□□□□ 0.34
DDX11-223ENST00000542838 ATP10BO94823 1461 aa17.19■□□□□ 0.34
DDX11-223ENST00000542838 TRPM1Q7Z4N2 1603 aa17.18■□□□□ 0.34
DDX11-223ENST00000542838 ABCA8O94911 1581 aa17.18■□□□□ 0.34
DDX11-223ENST00000542838 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
DDX11-223ENST00000542838 PDE4AP27815 886 aa17.17■□□□□ 0.34
DDX11-223ENST00000542838 FAM135AQ9P2D6 1515 aa17.17■□□□□ 0.34
DDX11-223ENST00000542838 CDCA7LQ96GN5 454 aa17.17■□□□□ 0.34
DDX11-223ENST00000542838 ARHGEF5Q12774 1597 aa17.16■□□□□ 0.34
DDX11-223ENST00000542838 RGL3Q3MIN7 710 aa17.16■□□□□ 0.34
DDX11-223ENST00000542838 PER1O15534 1290 aaPredicted RBP17.16■□□□□ 0.34
DDX11-223ENST00000542838 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
DDX11-223ENST00000542838 NBPF1Q3BBV0 1214 aa17.15■□□□□ 0.34
DDX11-223ENST00000542838 CC2D1BQ5T0F9 858 aaKnown RBP17.14■□□□□ 0.33
DDX11-223ENST00000542838 NUP160Q12769 1436 aa17.14■□□□□ 0.33
DDX11-223ENST00000542838 BACH2Q9BYV9 841 aa17.13■□□□□ 0.33
DDX11-223ENST00000542838 MS4A1P11836 297 aa17.13■□□□□ 0.33
DDX11-223ENST00000542838 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
DDX11-223ENST00000542838 PLIN1O60240 522 aa17.12■□□□□ 0.33
DDX11-223ENST00000542838 COL17A1Q9UMD9 1497 aaPredicted RBP17.11■□□□□ 0.33
DDX11-223ENST00000542838 WASHC2CQ9Y4E1 1318 aa17.1■□□□□ 0.33
DDX11-223ENST00000542838 GPRASP1Q5JY77 1395 aa17.1■□□□□ 0.33
DDX11-223ENST00000542838 DISP3Q9P2K9 1392 aa17.1■□□□□ 0.33
DDX11-223ENST00000542838 SAMD9LQ8IVG5 1584 aa17.1■□□□□ 0.33
DDX11-223ENST00000542838 BLMP54132 1417 aaPredicted RBP17.09■□□□□ 0.33
DDX11-223ENST00000542838 PANK3Q9H999 370 aa17.09■□□□□ 0.33
DDX11-223ENST00000542838 A2MP01023 1474 aa17.09■□□□□ 0.33
DDX11-223ENST00000542838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.331e-6■■□□□ 11.4
DDX11-223ENST00000542838 CDC42BPBQ9Y5S2 1711 aa17.08■□□□□ 0.32
DDX11-223ENST00000542838 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
DDX11-223ENST00000542838 TESK2Q96S53 571 aa17.07■□□□□ 0.32
DDX11-223ENST00000542838 LAS1LQ9Y4W2 734 aaKnown RBP17.07■□□□□ 0.32
DDX11-223ENST00000542838 PRDM15P57071 1507 aaPredicted RBP17.07■□□□□ 0.32
DDX11-223ENST00000542838 RSPH4AQ5TD94 716 aa17.07■□□□□ 0.32
DDX11-223ENST00000542838 INSRP06213 1382 aa17.07■□□□□ 0.32
DDX11-223ENST00000542838 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
DDX11-223ENST00000542838 LAMC1P11047 1609 aa17.06■□□□□ 0.32
DDX11-223ENST00000542838 ERBINQ96RT1 1412 aa17.06■□□□□ 0.32
DDX11-223ENST00000542838 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
DDX11-223ENST00000542838 PREX2Q70Z35 1606 aa17.06■□□□□ 0.32
DDX11-223ENST00000542838 TMF1P82094 1093 aa17.05■□□□□ 0.32
DDX11-223ENST00000542838 MYO5CQ9NQX4 1742 aa17.05■□□□□ 0.32
DDX11-223ENST00000542838 ZMYM4Q5VZL5 1548 aa17.05■□□□□ 0.32
DDX11-223ENST00000542838 UNC13BO14795 1591 aa17.04■□□□□ 0.32
DDX11-223ENST00000542838 NEFMP07197 916 aa17.04■□□□□ 0.32
DDX11-223ENST00000542838 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
DDX11-223ENST00000542838 SKAP1Q86WV1 359 aa17.03■□□□□ 0.32
DDX11-223ENST00000542838 EIF2AK4Q9P2K8 1649 aaKnown RBP17.02■□□□□ 0.32
DDX11-223ENST00000542838 SYCP2Q9BX26 1530 aa17.02■□□□□ 0.32
DDX11-223ENST00000542838 USP35Q9P2H5 1018 aa17■□□□□ 0.31
DDX11-223ENST00000542838 PPM1GO15355 546 aaPredicted RBP17■□□□□ 0.31
DDX11-223ENST00000542838 ADAMTS8Q9UP79 889 aa17■□□□□ 0.31
DDX11-223ENST00000542838 C20orf194Q5TEA3 1177 aa16.99■□□□□ 0.31
DDX11-223ENST00000542838 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
DDX11-223ENST00000542838 MAST1Q9Y2H9 1570 aa16.99■□□□□ 0.31
DDX11-223ENST00000542838 IQGAP3Q86VI3 1631 aa16.99■□□□□ 0.31
DDX11-223ENST00000542838 ARHGAP5Q13017 1502 aa16.98■□□□□ 0.31
DDX11-223ENST00000542838 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.31
DDX11-223ENST00000542838 KNSTRNQ9Y448 316 aa16.95■□□□□ 0.3
DDX11-223ENST00000542838 KDM2BQ8NHM5 1336 aa16.94■□□□□ 0.3
DDX11-223ENST00000542838 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
DDX11-223ENST00000542838 PPP2R1AP30153 589 aa16.94■□□□□ 0.3
DDX11-223ENST00000542838 PLEKHH1Q9ULM0 1364 aa16.94■□□□□ 0.3
DDX11-223ENST00000542838 PLXNC1O60486 1568 aa16.93■□□□□ 0.3
DDX11-223ENST00000542838 RNF17Q9BXT8 1623 aaKnown RBP16.93■□□□□ 0.3
DDX11-223ENST00000542838 MAGI2Q86UL8 1455 aa16.93■□□□□ 0.3
DDX11-223ENST00000542838 DUSP27Q5VZP5 1158 aa16.93■□□□□ 0.3
DDX11-223ENST00000542838 CENPQQ7L2Z9 268 aaPredicted RBP16.93■□□□□ 0.3
DDX11-223ENST00000542838 ATP10AO60312 1499 aa16.92■□□□□ 0.3
DDX11-223ENST00000542838 WDR7Q9Y4E6 1490 aa16.92■□□□□ 0.3
DDX11-223ENST00000542838 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDX11-223ENST00000542838 DUOX2Q9NRD8 1548 aa16.91■□□□□ 0.3
DDX11-223ENST00000542838 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
DDX11-223ENST00000542838 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.9■□□□□ 0.3
DDX11-223ENST00000542838 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
DDX11-223ENST00000542838 AMER1Q5JTC6 1135 aaPredicted RBP16.89■□□□□ 0.29
DDX11-223ENST00000542838 ZNF521Q96K83 1311 aa16.88■□□□□ 0.29
DDX11-223ENST00000542838 DAXXQ9UER7 740 aaPredicted RBP16.88■□□□□ 0.29
DDX11-223ENST00000542838 SLC4A3P48751 1232 aa16.88■□□□□ 0.29
DDX11-223ENST00000542838 FAM161AQ3B820 660 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms