RNA–Protein interactions for RNA: ENST00000542810.1

ACSL3-211, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 2

Gene ACSL3, Length 428 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-211ENST00000542810 SEMA3EO15041 775 aa13.24□□□□□ -0.29
ACSL3-211ENST00000542810 ARXQ96QS3 562 aa13.21□□□□□ -0.29
ACSL3-211ENST00000542810 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
ACSL3-211ENST00000542810 PTGER2P43116 358 aa13.2□□□□□ -0.3
ACSL3-211ENST00000542810 NBR1Q14596 966 aa13.2□□□□□ -0.3
ACSL3-211ENST00000542810 MARVELD3Q96A59 401 aa13.2□□□□□ -0.3
ACSL3-211ENST00000542810 LHX6Q9UPM6 363 aa13.2□□□□□ -0.3
ACSL3-211ENST00000542810 WDR62O43379 1518 aa13.19□□□□□ -0.3
ACSL3-211ENST00000542810 TESPA1A2RU30 521 aaPredicted RBP13.19□□□□□ -0.3
ACSL3-211ENST00000542810 MLLT3P42568 568 aaPredicted RBP13.19□□□□□ -0.3
ACSL3-211ENST00000542810 DDX12PQ92771 950 aa13.17□□□□□ -0.3
ACSL3-211ENST00000542810 EMP3P54852 163 aa13.16□□□□□ -0.3
ACSL3-211ENST00000542810 FOSBP53539 338 aa13.14□□□□□ -0.31
ACSL3-211ENST00000542810 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
ACSL3-211ENST00000542810 GRXCR2A6NFK2 248 aa13.12□□□□□ -0.31
ACSL3-211ENST00000542810 PCDHGA10Q9Y5H3 936 aa13.12□□□□□ -0.31
ACSL3-211ENST00000542810 URB2Q14146 1524 aaKnown RBP13.12□□□□□ -0.31
ACSL3-211ENST00000542810 PHF14O94880 888 aa13.11□□□□□ -0.31
ACSL3-211ENST00000542810 ERBB3P21860 1342 aa13.11□□□□□ -0.31
ACSL3-211ENST00000542810 POTEB3A0JP26 581 aa13.1□□□□□ -0.31
ACSL3-211ENST00000542810 POTEBQ6S5H4 581 aa13.1□□□□□ -0.31
ACSL3-211ENST00000542810 ZNF454Q8N9F8 522 aa13.1□□□□□ -0.31
ACSL3-211ENST00000542810 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
ACSL3-211ENST00000542810 OSBPP22059 807 aa13.09□□□□□ -0.31
ACSL3-211ENST00000542810 PRIM1P49642 420 aaKnown RBP13.09□□□□□ -0.31
ACSL3-211ENST00000542810 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
ACSL3-211ENST00000542810 DNMBPQ6XZF7 1577 aa13.09□□□□□ -0.31
ACSL3-211ENST00000542810 PSDA5PKW4 1024 aaPredicted RBP13.08□□□□□ -0.32
ACSL3-211ENST00000542810 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
ACSL3-211ENST00000542810 EPAS1Q99814 870 aa13.07□□□□□ -0.32
ACSL3-211ENST00000542810 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
ACSL3-211ENST00000542810 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
ACSL3-211ENST00000542810 TOPBP1Q92547 1522 aa13.06□□□□□ -0.32
ACSL3-211ENST00000542810 PPP4R3BQ5MIZ7 849 aa13.05□□□□□ -0.32
ACSL3-211ENST00000542810 TPRNQ4KMQ1 711 aa13.04□□□□□ -0.32
ACSL3-211ENST00000542810 SMYD5Q6GMV2 418 aa13.04□□□□□ -0.32
ACSL3-211ENST00000542810 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
ACSL3-211ENST00000542810 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
ACSL3-211ENST00000542810 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
ACSL3-211ENST00000542810 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
ACSL3-211ENST00000542810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
ACSL3-211ENST00000542810 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
ACSL3-211ENST00000542810 RBM26Q5T8P6 1007 aaKnown RBP13□□□□□ -0.33
ACSL3-211ENST00000542810 POTEGQ6S5H5 508 aa12.99□□□□□ -0.33
ACSL3-211ENST00000542810 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
ACSL3-211ENST00000542810 POTEMA6NI47 508 aa12.98□□□□□ -0.33
ACSL3-211ENST00000542810 ZNF687Q8N1G0 1237 aa12.98□□□□□ -0.33
ACSL3-211ENST00000542810 BCL2L12Q9HB09 334 aa12.98□□□□□ -0.33
ACSL3-211ENST00000542810 TULP1O00294 542 aaPredicted RBP12.97□□□□□ -0.33
ACSL3-211ENST00000542810 POTEEQ6S8J3 1075 aa12.97□□□□□ -0.33
ACSL3-211ENST00000542810 MAP3K7O43318 606 aa12.96□□□□□ -0.33
ACSL3-211ENST00000542810 TSR1Q2NL82 804 aaKnown RBP12.96□□□□□ -0.33
ACSL3-211ENST00000542810 LMOD2Q6P5Q4 547 aa12.96□□□□□ -0.33
ACSL3-211ENST00000542810 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.33
ACSL3-211ENST00000542810 TIMELESSQ9UNS1 1208 aa12.96□□□□□ -0.33
ACSL3-211ENST00000542810 CUX1P39880 1505 aa12.95□□□□□ -0.34
ACSL3-211ENST00000542810 POLA1P09884 1462 aaPredicted RBP12.94□□□□□ -0.34
ACSL3-211ENST00000542810 C6orf132Q5T0Z8 1188 aa12.94□□□□□ -0.34
ACSL3-211ENST00000542810 CDHR5Q9HBB8 845 aa12.94□□□□□ -0.34
ACSL3-211ENST00000542810 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
ACSL3-211ENST00000542810 FGD5Q6ZNL6 1462 aa12.93□□□□□ -0.34
ACSL3-211ENST00000542810 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
ACSL3-211ENST00000542810 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
ACSL3-211ENST00000542810 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
ACSL3-211ENST00000542810 NUTM2FA1L443 756 aa12.9□□□□□ -0.34
ACSL3-211ENST00000542810 PTPREP23469 700 aa12.9□□□□□ -0.34
ACSL3-211ENST00000542810 PSEN2P49810 448 aa12.9□□□□□ -0.34
ACSL3-211ENST00000542810 KCNK17Q96T54 332 aa12.9□□□□□ -0.34
ACSL3-211ENST00000542810 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
ACSL3-211ENST00000542810 COL9A1P20849 921 aa12.89□□□□□ -0.35
ACSL3-211ENST00000542810 PBX2P40425 430 aa12.89□□□□□ -0.35
ACSL3-211ENST00000542810 NPDC1Q9NQX5 325 aaPredicted RBP12.89□□□□□ -0.35
ACSL3-211ENST00000542810 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
ACSL3-211ENST00000542810 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
ACSL3-211ENST00000542810 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
ACSL3-211ENST00000542810 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
ACSL3-211ENST00000542810 GPR37O15354 613 aa12.88□□□□□ -0.35
ACSL3-211ENST00000542810 GPIHBP1Q8IV16 184 aa12.88□□□□□ -0.35
ACSL3-211ENST00000542810 SYNJ1O43426 1573 aa12.87□□□□□ -0.35
ACSL3-211ENST00000542810 SOGA1O94964 1423 aa12.87□□□□□ -0.35
ACSL3-211ENST00000542810 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
ACSL3-211ENST00000542810 PPP1R3GB7ZBB8 358 aa12.85□□□□□ -0.35
ACSL3-211ENST00000542810 PTGDRQ13258 359 aa12.85□□□□□ -0.35
ACSL3-211ENST00000542810 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
ACSL3-211ENST00000542810 PBRM1Q86U86 1689 aa12.84□□□□□ -0.35
ACSL3-211ENST00000542810 KRTAP3-3Q9BYR6 98 aa12.84□□□□□ -0.35
ACSL3-211ENST00000542810 KRTAP3-2Q9BYR7 98 aa12.84□□□□□ -0.35
ACSL3-211ENST00000542810 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
ACSL3-211ENST00000542810 HOMEZQ8IX15 550 aa12.83□□□□□ -0.36
ACSL3-211ENST00000542810 AQRO60306 1485 aaKnown RBP eCLIP12.81□□□□□ -0.364e-7■□□□□ 11.1
ACSL3-211ENST00000542810 FCHSD2O94868 740 aa12.81□□□□□ -0.36
ACSL3-211ENST00000542810 CERKQ8TCT0 537 aa12.81□□□□□ -0.36
ACSL3-211ENST00000542810 ZC3H15Q8WU90 426 aaKnown RBP12.81□□□□□ -0.36
ACSL3-211ENST00000542810 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
ACSL3-211ENST00000542810 ZBED2Q9BTP6 218 aa12.81□□□□□ -0.36
ACSL3-211ENST00000542810 CHD1O14646 1710 aa12.81□□□□□ -0.36
ACSL3-211ENST00000542810 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.36
ACSL3-211ENST00000542810 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
ACSL3-211ENST00000542810 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
ACSL3-211ENST00000542810 HIC1Q14526 733 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms