RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 U2AF1Q01081 240 aaKnown RBP eCLIP10.49□□□□□ -0.73
PRKAB1-207ENST00000542698 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
PRKAB1-207ENST00000542698 GLIPR1L2Q4G1C9 344 aa10.49□□□□□ -0.73
PRKAB1-207ENST00000542698 SLKQ9H2G2 1235 aaPredicted RBP10.49□□□□□ -0.73
PRKAB1-207ENST00000542698 CDCA7LQ96GN5 454 aa10.49□□□□□ -0.73
PRKAB1-207ENST00000542698 RWDD1Q9H446 243 aaPredicted RBP10.49□□□□□ -0.73
PRKAB1-207ENST00000542698 IFT140Q96RY7 1462 aa10.49□□□□□ -0.73
PRKAB1-207ENST00000542698 SLC4A3P48751 1232 aa10.49□□□□□ -0.73
PRKAB1-207ENST00000542698 SPAG9O60271 1321 aaKnown RBP10.48□□□□□ -0.73
PRKAB1-207ENST00000542698 APAF1O14727 1248 aa10.48□□□□□ -0.73
PRKAB1-207ENST00000542698 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
PRKAB1-207ENST00000542698 GGT6Q6P531 493 aa10.48□□□□□ -0.73
PRKAB1-207ENST00000542698 ANKRD30BQ9BXX2 1392 aa10.48□□□□□ -0.73
PRKAB1-207ENST00000542698 PTPRGP23470 1445 aa10.48□□□□□ -0.73
PRKAB1-207ENST00000542698 EIF3AQ14152 1382 aaKnown RBP10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 CENPJQ9HC77 1338 aaPredicted RBP10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 SMG6Q86US8 1419 aaKnown RBP10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 KIAA1107Q9UPP5 1409 aa10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 SAFB2Q14151 953 aaKnown RBP eCLIP10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 PNNQ9H307 717 aaKnown RBP10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 CHMP4BQ9H444 224 aaKnown RBP10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 PMFBP1Q8TBY8 1022 aa10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 CLUAP1Q96AJ1 413 aa10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 SRPK2P78362 688 aaKnown RBP10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 SPRYD3Q8NCJ5 442 aa10.47□□□□□ -0.73
PRKAB1-207ENST00000542698 SUPT6HQ7KZ85 1726 aaKnown RBP10.46□□□□□ -0.73
PRKAB1-207ENST00000542698 ADAMTS8Q9UP79 889 aa10.46□□□□□ -0.74
PRKAB1-207ENST00000542698 E9PSI1 815 aa10.45□□□□□ -0.74
PRKAB1-207ENST00000542698 NBPF1Q3BBV0 1214 aa10.45□□□□□ -0.74
PRKAB1-207ENST00000542698 L1TD1Q5T7N2 865 aaKnown RBP10.45□□□□□ -0.74
PRKAB1-207ENST00000542698 DAPK1P53355 1430 aa10.45□□□□□ -0.74
PRKAB1-207ENST00000542698 GRIN2BQ13224 1484 aa10.45□□□□□ -0.74
PRKAB1-207ENST00000542698 ROCK1Q13464 1354 aa10.45□□□□□ -0.74
PRKAB1-207ENST00000542698 HSCBQ8IWL3 235 aa10.45□□□□□ -0.74
PRKAB1-207ENST00000542698 WASHC2CQ9Y4E1 1318 aa10.45□□□□□ -0.74
PRKAB1-207ENST00000542698 URB2Q14146 1524 aaKnown RBP10.45□□□□□ -0.74
PRKAB1-207ENST00000542698 EPRSP07814 1512 aaKnown RBP10.44□□□□□ -0.74
PRKAB1-207ENST00000542698 PTPRKQ15262 1439 aa10.44□□□□□ -0.74
PRKAB1-207ENST00000542698 IPO8O15397 1037 aaKnown RBP10.44□□□□□ -0.74
PRKAB1-207ENST00000542698 HSP90AB1P08238 724 aaKnown RBP10.44□□□□□ -0.74
PRKAB1-207ENST00000542698 GSE1Q14687 1217 aa10.44□□□□□ -0.74
PRKAB1-207ENST00000542698 NCLP19338 710 aaKnown RBP10.43□□□□□ -0.74
PRKAB1-207ENST00000542698 CGNL1Q0VF96 1302 aa10.43□□□□□ -0.74
PRKAB1-207ENST00000542698 NCOA1Q15788 1441 aa10.43□□□□□ -0.74
PRKAB1-207ENST00000542698 PRG4Q92954 1404 aaPredicted RBP10.43□□□□□ -0.74
PRKAB1-207ENST00000542698 STK26Q9P289 416 aa10.42□□□□□ -0.74
PRKAB1-207ENST00000542698 TRAK1Q9UPV9 953 aa10.42□□□□□ -0.74
PRKAB1-207ENST00000542698 COG6Q9Y2V7 657 aa10.42□□□□□ -0.74
PRKAB1-207ENST00000542698 RRP7AQ9Y3A4 280 aaKnown RBP10.42□□□□□ -0.74
PRKAB1-207ENST00000542698 NGEFQ8N5V2 710 aa10.42□□□□□ -0.74
PRKAB1-207ENST00000542698 TROQ12816 1431 aaPredicted RBP10.42□□□□□ -0.74
PRKAB1-207ENST00000542698 CUL7Q14999 1698 aa10.42□□□□□ -0.74
PRKAB1-207ENST00000542698 ITPRIPQ8IWB1 547 aa10.42□□□□□ -0.74
PRKAB1-207ENST00000542698 BACH2Q9BYV9 841 aa10.42□□□□□ -0.74
PRKAB1-207ENST00000542698 STAC3Q96MF2 364 aa10.41□□□□□ -0.74
PRKAB1-207ENST00000542698 PTPN23Q9H3S7 1636 aa10.41□□□□□ -0.74
PRKAB1-207ENST00000542698 SMC4Q9NTJ3 1288 aa10.41□□□□□ -0.74
PRKAB1-207ENST00000542698 CDK13Q14004 1512 aaKnown RBP10.41□□□□□ -0.74
PRKAB1-207ENST00000542698 CASC1Q6TDU7 716 aa10.41□□□□□ -0.74
PRKAB1-207ENST00000542698 BCL2L13Q9BXK5 485 aa10.41□□□□□ -0.74
PRKAB1-207ENST00000542698 NAP1L5Q96NT1 182 aaPredicted RBP10.4□□□□□ -0.74
PRKAB1-207ENST00000542698 HECW1Q76N89 1606 aa10.4□□□□□ -0.74
PRKAB1-207ENST00000542698 GZF1Q9H116 711 aaPredicted RBP10.4□□□□□ -0.75
PRKAB1-207ENST00000542698 ABCC5O15440 1437 aa10.39□□□□□ -0.75
PRKAB1-207ENST00000542698 RPRD2Q5VT52 1461 aaKnown RBP10.39□□□□□ -0.75
PRKAB1-207ENST00000542698 MFAP1P55081 439 aaKnown RBP10.39□□□□□ -0.75
PRKAB1-207ENST00000542698 C9orf84Q5VXU9 1444 aa10.38□□□□□ -0.75
PRKAB1-207ENST00000542698 CFAP43Q8NDM7 1665 aa10.38□□□□□ -0.75
PRKAB1-207ENST00000542698 PPP2R1AP30153 589 aa10.38□□□□□ -0.75
PRKAB1-207ENST00000542698 PLPPR3Q6T4P5 718 aa10.38□□□□□ -0.75
PRKAB1-207ENST00000542698 HDGFL2Q7Z4V5 671 aaPredicted RBP10.38□□□□□ -0.75
PRKAB1-207ENST00000542698 NFKBIBQ15653 356 aa10.37□□□□□ -0.75
PRKAB1-207ENST00000542698 ILDR1Q86SU0 546 aaPredicted RBP10.37□□□□□ -0.75
PRKAB1-207ENST00000542698 CYB5RLQ6IPT4 315 aa10.36□□□□□ -0.75
PRKAB1-207ENST00000542698 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
PRKAB1-207ENST00000542698 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.36□□□□□ -0.75
PRKAB1-207ENST00000542698 NUTM2DQ5VT03 806 aaPredicted RBP10.35□□□□□ -0.75
PRKAB1-207ENST00000542698 ZKSCAN2Q63HK3 967 aa10.35□□□□□ -0.75
PRKAB1-207ENST00000542698 PHF23Q9BUL5 403 aaPredicted RBP10.35□□□□□ -0.75
PRKAB1-207ENST00000542698 KIAA0586Q9BVV6 1533 aa10.35□□□□□ -0.75
PRKAB1-207ENST00000542698 CTTNBP2Q8WZ74 1663 aa10.35□□□□□ -0.75
PRKAB1-207ENST00000542698 GOLGA6L3A6NEY3 463 aa10.35□□□□□ -0.75
PRKAB1-207ENST00000542698 GBP4Q96PP9 640 aa10.35□□□□□ -0.75
PRKAB1-207ENST00000542698 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
PRKAB1-207ENST00000542698 CALD1Q05682 793 aaKnown RBP10.34□□□□□ -0.75
PRKAB1-207ENST00000542698 PANK1Q8TE04 598 aa10.33□□□□□ -0.76
PRKAB1-207ENST00000542698 RUNDC1Q96C34 613 aa10.33□□□□□ -0.76
PRKAB1-207ENST00000542698 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
PRKAB1-207ENST00000542698 IQGAP2Q13576 1575 aa10.33□□□□□ -0.76
PRKAB1-207ENST00000542698 AFAP1Q8N556 730 aa10.32□□□□□ -0.76
PRKAB1-207ENST00000542698 CFAP70Q5T0N1 1121 aa10.32□□□□□ -0.76
PRKAB1-207ENST00000542698 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
PRKAB1-207ENST00000542698 PTMAP06454 111 aaKnown RBP10.32□□□□□ -0.76
PRKAB1-207ENST00000542698 ABCA5Q8WWZ7 1642 aa10.32□□□□□ -0.76
PRKAB1-207ENST00000542698 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
PRKAB1-207ENST00000542698 EVC2Q86UK5 1308 aa10.31□□□□□ -0.76
PRKAB1-207ENST00000542698 BCAR3O75815 825 aa10.31□□□□□ -0.76
PRKAB1-207ENST00000542698 PDE3AQ14432 1141 aa10.31□□□□□ -0.76
PRKAB1-207ENST00000542698 DZIP1LQ8IYY4 767 aaKnown RBP10.31□□□□□ -0.76
PRKAB1-207ENST00000542698 APBB1O00213 710 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms