RNA–Protein interactions for RNA: ENST00000542688.5

ACSF3-213, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 5

Gene ACSF3, Length 2,024 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-213ENST00000542688 KDM2BQ8NHM5 1336 aa22.33■■□□□ 1.17
ACSF3-213ENST00000542688 ABCC5O15440 1437 aa22.31■■□□□ 1.16
ACSF3-213ENST00000542688 BLMP54132 1417 aaPredicted RBP22.31■■□□□ 1.16
ACSF3-213ENST00000542688 PARD3Q8TEW0 1356 aa22.31■■□□□ 1.16
ACSF3-213ENST00000542688 FRAT2O75474 233 aaPredicted RBP22.31■■□□□ 1.16
ACSF3-213ENST00000542688 ADGBQ8N7X0 1667 aa22.3■■□□□ 1.16
ACSF3-213ENST00000542688 ZNF608Q9ULD9 1512 aaPredicted RBP22.3■■□□□ 1.16
ACSF3-213ENST00000542688 SLC4A3P48751 1232 aa22.29■■□□□ 1.16
ACSF3-213ENST00000542688 SENP3-EIF4A1A0A087X0R7 540 aa22.28■■□□□ 1.16
ACSF3-213ENST00000542688 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
ACSF3-213ENST00000542688 C8orf34Q49A92 452 aa22.26■■□□□ 1.15
ACSF3-213ENST00000542688 VIRMAQ69YN4 1812 aaKnown RBP22.25■■□□□ 1.15
ACSF3-213ENST00000542688 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
ACSF3-213ENST00000542688 CARD11Q9BXL7 1154 aa22.24■■□□□ 1.15
ACSF3-213ENST00000542688 ZNF326Q5BKZ1 582 aaKnown RBP22.23■■□□□ 1.15
ACSF3-213ENST00000542688 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.23■■□□□ 1.15
ACSF3-213ENST00000542688 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
ACSF3-213ENST00000542688 PLIN1O60240 522 aa22.21■■□□□ 1.15
ACSF3-213ENST00000542688 BECN1Q14457 450 aa22.2■■□□□ 1.14
ACSF3-213ENST00000542688 CDCA7LQ96GN5 454 aa22.2■■□□□ 1.14
ACSF3-213ENST00000542688 CDK13Q14004 1512 aaKnown RBP22.19■■□□□ 1.14
ACSF3-213ENST00000542688 ADGRL2O95490 1459 aa22.17■■□□□ 1.14
ACSF3-213ENST00000542688 EIF3AQ14152 1382 aaKnown RBP22.17■■□□□ 1.14
ACSF3-213ENST00000542688 SKAP1Q86WV1 359 aa22.14■■□□□ 1.14
ACSF3-213ENST00000542688 RRP9O43818 475 aaKnown RBP22.14■■□□□ 1.13
ACSF3-213ENST00000542688 RRAGDQ9NQL2 400 aaPredicted RBP22.14■■□□□ 1.13
ACSF3-213ENST00000542688 CROCC2H7BZ55 1655 aa22.13■■□□□ 1.13
ACSF3-213ENST00000542688 ITSN2Q9NZM3 1697 aa22.13■■□□□ 1.13
ACSF3-213ENST00000542688 ST20-MTHFSA0A0A6YYL1 179 aa22.13■■□□□ 1.13
ACSF3-213ENST00000542688 IQGAP2Q13576 1575 aa22.12■■□□□ 1.13
ACSF3-213ENST00000542688 MAGI1Q96QZ7 1491 aaPredicted RBP22.12■■□□□ 1.13
ACSF3-213ENST00000542688 PKD2Q13563 968 aa22.11■■□□□ 1.13
ACSF3-213ENST00000542688 PNNQ9H307 717 aaKnown RBP22.11■■□□□ 1.13
ACSF3-213ENST00000542688 POGKQ9P215 609 aa22.09■■□□□ 1.13
ACSF3-213ENST00000542688 HSP90AA1P07900 732 aaKnown RBP22.09■■□□□ 1.13
ACSF3-213ENST00000542688 CLCN1P35523 988 aa22.09■■□□□ 1.13
ACSF3-213ENST00000542688 CEP170Q5SW79 1584 aa22.08■■□□□ 1.12
ACSF3-213ENST00000542688 C20orf194Q5TEA3 1177 aa22.07■■□□□ 1.12
ACSF3-213ENST00000542688 NAP1L5Q96NT1 182 aaPredicted RBP22.07■■□□□ 1.12
ACSF3-213ENST00000542688 CAMSAP2Q08AD1 1489 aa22.07■■□□□ 1.12
ACSF3-213ENST00000542688 HSP90AA2PQ14568 343 aaPredicted RBP22.07■■□□□ 1.12
ACSF3-213ENST00000542688 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
ACSF3-213ENST00000542688 KIAA0586Q9BVV6 1533 aa22.07■■□□□ 1.12
ACSF3-213ENST00000542688 KDM5DQ9BY66 1539 aa22.06■■□□□ 1.12
ACSF3-213ENST00000542688 ANKRD30AQ9BXX3 1397 aa22.05■■□□□ 1.12
ACSF3-213ENST00000542688 LAMC1P11047 1609 aa22.05■■□□□ 1.12
ACSF3-213ENST00000542688 MAPK8IP3Q9UPT6 1336 aa22.05■■□□□ 1.12
ACSF3-213ENST00000542688 GOLGA6L3A6NEY3 463 aa22.04■■□□□ 1.12
ACSF3-213ENST00000542688 RGS3P49796 1198 aa22.04■■□□□ 1.12
ACSF3-213ENST00000542688 COL17A1Q9UMD9 1497 aaPredicted RBP22.03■■□□□ 1.12
ACSF3-213ENST00000542688 TRPM1Q7Z4N2 1603 aa22.02■■□□□ 1.12
ACSF3-213ENST00000542688 PER1O15534 1290 aaPredicted RBP22.02■■□□□ 1.12
ACSF3-213ENST00000542688 VSIG10Q8N0Z9 540 aa22.02■■□□□ 1.12
ACSF3-213ENST00000542688 SYNJ2O15056 1496 aa22.02■■□□□ 1.11
ACSF3-213ENST00000542688 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
ACSF3-213ENST00000542688 ZMYND15Q9H091 742 aa22■■□□□ 1.11
ACSF3-213ENST00000542688 ZMYM3Q14202 1370 aa22■■□□□ 1.11
ACSF3-213ENST00000542688 DUSP27Q5VZP5 1158 aa21.99■■□□□ 1.11
ACSF3-213ENST00000542688 CCDC144AA2RUR9 1427 aa21.99■■□□□ 1.11
ACSF3-213ENST00000542688 ANKRD50Q9ULJ7 1429 aa21.99■■□□□ 1.11
ACSF3-213ENST00000542688 NINLQ9Y2I6 1382 aa21.98■■□□□ 1.11
ACSF3-213ENST00000542688 USP19O94966 1318 aa21.98■■□□□ 1.11
ACSF3-213ENST00000542688 ZNF644Q9H582 1327 aaPredicted RBP21.98■■□□□ 1.11
ACSF3-213ENST00000542688 FSD2A1L4K1 749 aa21.98■■□□□ 1.11
ACSF3-213ENST00000542688 GOLGA2Q08379 1002 aa21.97■■□□□ 1.11
ACSF3-213ENST00000542688 UPF2Q9HAU5 1272 aaKnown RBP21.97■■□□□ 1.11
ACSF3-213ENST00000542688 ISY1Q9ULR0 285 aaKnown RBP21.96■■□□□ 1.11
ACSF3-213ENST00000542688 SHANK2Q9UPX8 1470 aa21.95■■□□□ 1.1
ACSF3-213ENST00000542688 ANTXR1Q9H6X2 564 aa21.94■■□□□ 1.1
ACSF3-213ENST00000542688 GPRASP1Q5JY77 1395 aa21.94■■□□□ 1.1
ACSF3-213ENST00000542688 XRCC6P12956 609 aaKnown RBP eCLIP21.94■■□□□ 1.1
ACSF3-213ENST00000542688 ZNF521Q96K83 1311 aa21.93■■□□□ 1.1
ACSF3-213ENST00000542688 WDR43Q15061 677 aaKnown RBP eCLIP21.93■■□□□ 1.1
ACSF3-213ENST00000542688 RAPGEF6Q8TEU7 1601 aa21.93■■□□□ 1.1
ACSF3-213ENST00000542688 ADCY10Q96PN6 1610 aa21.93■■□□□ 1.1
ACSF3-213ENST00000542688 PRAG1Q86YV5 1406 aa21.93■■□□□ 1.1
ACSF3-213ENST00000542688 NLRP1Q9C000 1473 aa21.92■■□□□ 1.1
ACSF3-213ENST00000542688 CGNL1Q0VF96 1302 aa21.92■■□□□ 1.1
ACSF3-213ENST00000542688 MRE11P49959 708 aa21.92■■□□□ 1.1
ACSF3-213ENST00000542688 NUP155O75694 1391 aa21.92■■□□□ 1.1
ACSF3-213ENST00000542688 PRDM15P57071 1507 aaPredicted RBP21.91■■□□□ 1.1
ACSF3-213ENST00000542688 CC2D1BQ5T0F9 858 aaKnown RBP21.91■■□□□ 1.1
ACSF3-213ENST00000542688 SLKQ9H2G2 1235 aaPredicted RBP21.91■■□□□ 1.1
ACSF3-213ENST00000542688 TROQ12816 1431 aaPredicted RBP21.91■■□□□ 1.1
ACSF3-213ENST00000542688 PLEKHH1Q9ULM0 1364 aa21.91■■□□□ 1.1
ACSF3-213ENST00000542688 CFDP1Q9UEE9 299 aaPredicted RBP21.9■■□□□ 1.1
ACSF3-213ENST00000542688 KDM2AQ9Y2K7 1162 aa21.9■■□□□ 1.1
ACSF3-213ENST00000542688 EIF2AK4Q9P2K8 1649 aaKnown RBP21.9■■□□□ 1.1
ACSF3-213ENST00000542688 NKTRP30414 1462 aaKnown RBP21.9■■□□□ 1.1
ACSF3-213ENST00000542688 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
ACSF3-213ENST00000542688 CHMP7Q8WUX9 453 aaPredicted RBP21.89■■□□□ 1.1
ACSF3-213ENST00000542688 PTPRGP23470 1445 aa21.88■■□□□ 1.09
ACSF3-213ENST00000542688 TPM2P07951 284 aa21.88■■□□□ 1.09
ACSF3-213ENST00000542688 SLFN5Q08AF3 891 aa21.88■■□□□ 1.09
ACSF3-213ENST00000542688 ADAMTS8Q9UP79 889 aa21.88■■□□□ 1.09
ACSF3-213ENST00000542688 ERBINQ96RT1 1412 aa21.88■■□□□ 1.09
ACSF3-213ENST00000542688 AAMPQ13685 434 aa21.87■■□□□ 1.09
ACSF3-213ENST00000542688 NUP160Q12769 1436 aa21.87■■□□□ 1.09
ACSF3-213ENST00000542688 KIAA0556O60303 1618 aa21.87■■□□□ 1.09
ACSF3-213ENST00000542688 GPATCH8Q9UKJ3 1502 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms