RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 CNGB1Q14028 1251 aaPredicted RBP9.14□□□□□ -0.95
NKRF-204ENST00000542113 MAST1Q9Y2H9 1570 aa9.14□□□□□ -0.95
NKRF-204ENST00000542113 CCDC144AA2RUR9 1427 aa9.13□□□□□ -0.95
NKRF-204ENST00000542113 FAM135AQ9P2D6 1515 aa9.13□□□□□ -0.95
NKRF-204ENST00000542113 PNISRQ8TF01 805 aaKnown RBP9.13□□□□□ -0.95
NKRF-204ENST00000542113 LRPPRCP42704 1394 aaKnown RBP9.12□□□□□ -0.95
NKRF-204ENST00000542113 WASHC2CQ9Y4E1 1318 aa9.12□□□□□ -0.95
NKRF-204ENST00000542113 LAMC1P11047 1609 aa9.12□□□□□ -0.95
NKRF-204ENST00000542113 INSRP06213 1382 aa9.12□□□□□ -0.95
NKRF-204ENST00000542113 B4GALNT3Q6L9W6 998 aa9.12□□□□□ -0.95
NKRF-204ENST00000542113 EIF2AK4Q9P2K8 1649 aaKnown RBP9.11□□□□□ -0.95
NKRF-204ENST00000542113 UNC13BO14795 1591 aa9.11□□□□□ -0.95
NKRF-204ENST00000542113 E9PCH4 1651 aa9.11□□□□□ -0.95
NKRF-204ENST00000542113 PDE3BQ13370 1112 aa9.11□□□□□ -0.95
NKRF-204ENST00000542113 ZMYM4Q5VZL5 1548 aa9.11□□□□□ -0.95
NKRF-204ENST00000542113 DCAF11Q8TEB1 546 aa9.11□□□□□ -0.95
NKRF-204ENST00000542113 CCDC136Q96JN2 1154 aa9.11□□□□□ -0.95
NKRF-204ENST00000542113 SAMD9LQ8IVG5 1584 aa9.11□□□□□ -0.95
NKRF-204ENST00000542113 NLRP13Q86W25 1043 aa9.1□□□□□ -0.95
NKRF-204ENST00000542113 GPRASP1Q5JY77 1395 aa9.1□□□□□ -0.95
NKRF-204ENST00000542113 PRAG1Q86YV5 1406 aa9.1□□□□□ -0.95
NKRF-204ENST00000542113 ST20-MTHFSA0A0A6YYL1 179 aa9.1□□□□□ -0.95
NKRF-204ENST00000542113 PLXNC1O60486 1568 aa9.1□□□□□ -0.95
NKRF-204ENST00000542113 TRPM1Q7Z4N2 1603 aa9.09□□□□□ -0.95
NKRF-204ENST00000542113 MSH5O43196 834 aa9.09□□□□□ -0.95
NKRF-204ENST00000542113 HNRNPMP52272 730 aaKnown RBP eCLIP9.09□□□□□ -0.95
NKRF-204ENST00000542113 KDM2AQ9Y2K7 1162 aa9.08□□□□□ -0.96
NKRF-204ENST00000542113 ARHGAP5Q13017 1502 aa9.08□□□□□ -0.96
NKRF-204ENST00000542113 CDC42BPBQ9Y5S2 1711 aa9.08□□□□□ -0.96
NKRF-204ENST00000542113 PARD3Q8TEW0 1356 aa9.08□□□□□ -0.96
NKRF-204ENST00000542113 IQGAP3Q86VI3 1631 aa9.08□□□□□ -0.96
NKRF-204ENST00000542113 ATP10AO60312 1499 aa9.07□□□□□ -0.96
NKRF-204ENST00000542113 COL17A1Q9UMD9 1497 aaPredicted RBP9.07□□□□□ -0.96
NKRF-204ENST00000542113 DUOX2Q9NRD8 1548 aa9.07□□□□□ -0.96
NKRF-204ENST00000542113 ERBINQ96RT1 1412 aa9.07□□□□□ -0.96
NKRF-204ENST00000542113 SYCP2Q9BX26 1530 aa9.07□□□□□ -0.96
NKRF-204ENST00000542113 ANP32AP39687 249 aaKnown RBP9.07□□□□□ -0.96
NKRF-204ENST00000542113 PRDM15P57071 1507 aaPredicted RBP9.06□□□□□ -0.96
NKRF-204ENST00000542113 STAC3Q96MF2 364 aa9.06□□□□□ -0.96
NKRF-204ENST00000542113 MAGI2Q86UL8 1455 aa9.05□□□□□ -0.96
NKRF-204ENST00000542113 MYO5CQ9NQX4 1742 aa9.05□□□□□ -0.96
NKRF-204ENST00000542113 ABCC2Q92887 1545 aa9.05□□□□□ -0.96
NKRF-204ENST00000542113 SENP3-EIF4A1A0A087X0R7 540 aa9.04□□□□□ -0.96
NKRF-204ENST00000542113 A2MP01023 1474 aa9.04□□□□□ -0.96
NKRF-204ENST00000542113 RRP1P56182 461 aaKnown RBP9.04□□□□□ -0.96
NKRF-204ENST00000542113 TMF1P82094 1093 aa9.04□□□□□ -0.96
NKRF-204ENST00000542113 NOP58Q9Y2X3 529 aaKnown RBP9.04□□□□□ -0.96
NKRF-204ENST00000542113 SHROOM2Q13796 1616 aa9.04□□□□□ -0.96
NKRF-204ENST00000542113 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.03□□□□□ -0.96
NKRF-204ENST00000542113 RCAN3Q9UKA8 241 aa9.03□□□□□ -0.96
NKRF-204ENST00000542113 TTC37Q6PGP7 1564 aa9.03□□□□□ -0.96
NKRF-204ENST00000542113 CDCA8Q53HL2 280 aa9.03□□□□□ -0.96
NKRF-204ENST00000542113 TCERG1O14776 1098 aaKnown RBP9.02□□□□□ -0.97
NKRF-204ENST00000542113 PLA2R1Q13018 1463 aa9.02□□□□□ -0.97
NKRF-204ENST00000542113 BLMP54132 1417 aaPredicted RBP9.01□□□□□ -0.97
NKRF-204ENST00000542113 RNF17Q9BXT8 1623 aaKnown RBP9.01□□□□□ -0.97
NKRF-204ENST00000542113 SLC24A1O60721 1099 aa9.01□□□□□ -0.97
NKRF-204ENST00000542113 EFCAB2Q5VUJ9 269 aa9.01□□□□□ -0.97
NKRF-204ENST00000542113 PER1O15534 1290 aaPredicted RBP9□□□□□ -0.97
NKRF-204ENST00000542113 PLCH2O75038 1416 aa9□□□□□ -0.97
NKRF-204ENST00000542113 RGL3Q3MIN7 710 aa9□□□□□ -0.97
NKRF-204ENST00000542113 MS4A1P11836 297 aa8.99□□□□□ -0.97
NKRF-204ENST00000542113 IPO9Q96P70 1041 aaKnown RBP8.99□□□□□ -0.97
NKRF-204ENST00000542113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.99□□□□□ -0.97
NKRF-204ENST00000542113 ARAP3Q8WWN8 1544 aa8.99□□□□□ -0.97
NKRF-204ENST00000542113 TESK2Q96S53 571 aa8.99□□□□□ -0.97
NKRF-204ENST00000542113 CHD1O14646 1710 aa8.99□□□□□ -0.97
NKRF-204ENST00000542113 UHRF1BP1LA0JNW5 1464 aa8.99□□□□□ -0.97
NKRF-204ENST00000542113 RTEL1-TNFRSF6BF6WH68 1400 aa8.98□□□□□ -0.97
NKRF-204ENST00000542113 ABCC1P33527 1531 aa8.98□□□□□ -0.97
NKRF-204ENST00000542113 EIF3AQ14152 1382 aaKnown RBP8.98□□□□□ -0.97
NKRF-204ENST00000542113 BCL11AQ9H165 835 aa8.98□□□□□ -0.97
NKRF-204ENST00000542113 DISP3Q9P2K9 1392 aa8.98□□□□□ -0.97
NKRF-204ENST00000542113 NBPF1Q3BBV0 1214 aa8.98□□□□□ -0.97
NKRF-204ENST00000542113 ZBTB47Q9UFB7 747 aaPredicted RBP8.98□□□□□ -0.97
NKRF-204ENST00000542113 PANK3Q9H999 370 aa8.97□□□□□ -0.97
NKRF-204ENST00000542113 SCAPERQ9BY12 1400 aa8.97□□□□□ -0.97
NKRF-204ENST00000542113 TRPM2O94759 1503 aa8.97□□□□□ -0.97
NKRF-204ENST00000542113 KNSTRNQ9Y448 316 aa8.96□□□□□ -0.97
NKRF-204ENST00000542113 SYNMO15061 1565 aa8.96□□□□□ -0.98
NKRF-204ENST00000542113 NEURL4Q96JN8 1562 aa8.96□□□□□ -0.98
NKRF-204ENST00000542113 KANK1Q14678 1352 aa8.96□□□□□ -0.98
NKRF-204ENST00000542113 RTL5Q5HYW3 569 aaPredicted RBP8.96□□□□□ -0.98
NKRF-204ENST00000542113 SCAF11Q99590 1463 aaKnown RBP8.95□□□□□ -0.98
NKRF-204ENST00000542113 NPC1L1Q9UHC9 1359 aa8.95□□□□□ -0.98
NKRF-204ENST00000542113 MADDQ8WXG6 1647 aa8.95□□□□□ -0.98
NKRF-204ENST00000542113 CC2D1BQ5T0F9 858 aaKnown RBP8.95□□□□□ -0.98
NKRF-204ENST00000542113 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.95□□□□□ -0.98
NKRF-204ENST00000542113 EXOC6Q8TAG9 804 aa8.95□□□□□ -0.98
NKRF-204ENST00000542113 IQGAP1P46940 1657 aa8.95□□□□□ -0.98
NKRF-204ENST00000542113 WDR43Q15061 677 aaKnown RBP eCLIP8.95□□□□□ -0.98
NKRF-204ENST00000542113 SPAG9O60271 1321 aaKnown RBP8.94□□□□□ -0.98
NKRF-204ENST00000542113 SPHKAPQ2M3C7 1700 aa8.94□□□□□ -0.98
NKRF-204ENST00000542113 PTPRTO14522 1441 aa8.94□□□□□ -0.98
NKRF-204ENST00000542113 PIK3C2GO75747 1445 aa8.94□□□□□ -0.98
NKRF-204ENST00000542113 ZCCHC11Q5TAX3 1644 aaKnown RBP8.94□□□□□ -0.98
NKRF-204ENST00000542113 CLASP1Q7Z460 1538 aa8.94□□□□□ -0.98
NKRF-204ENST00000542113 NGEFQ8N5V2 710 aa8.93□□□□□ -0.98
NKRF-204ENST00000542113 CEP152O94986 1710 aa8.93□□□□□ -0.98
NKRF-204ENST00000542113 KIAA1210Q9ULL0 1709 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms