RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-226ENST00000541968 TK2O00142 265 aa12□□□□□ -0.49
RAP1B-226ENST00000541968 NBR1Q14596 966 aa12□□□□□ -0.49
RAP1B-226ENST00000541968 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
RAP1B-226ENST00000541968 P3H3Q8IVL6 736 aa11.97□□□□□ -0.49
RAP1B-226ENST00000541968 RNF166Q96A37 237 aaPredicted RBP11.97□□□□□ -0.49
RAP1B-226ENST00000541968 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
RAP1B-226ENST00000541968 VPS9D1Q9Y2B5 631 aa11.96□□□□□ -0.49
RAP1B-226ENST00000541968 COL9A1P20849 921 aa11.95□□□□□ -0.5
RAP1B-226ENST00000541968 ZBED2Q9BTP6 218 aa11.95□□□□□ -0.5
RAP1B-226ENST00000541968 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
RAP1B-226ENST00000541968 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
RAP1B-226ENST00000541968 MAP3K7O43318 606 aa11.94□□□□□ -0.5
RAP1B-226ENST00000541968 HRO43593 1189 aa11.94□□□□□ -0.5
RAP1B-226ENST00000541968 EN1Q05925 392 aaPredicted RBP11.93□□□□□ -0.5
RAP1B-226ENST00000541968 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
RAP1B-226ENST00000541968 SLC4A5Q9BY07 1137 aa11.93□□□□□ -0.5
RAP1B-226ENST00000541968 PRIM1P49642 420 aaKnown RBP11.91□□□□□ -0.5
RAP1B-226ENST00000541968 TSR1Q2NL82 804 aaKnown RBP11.91□□□□□ -0.5
RAP1B-226ENST00000541968 PROX2Q3B8N5 592 aa11.9□□□□□ -0.5
RAP1B-226ENST00000541968 OSBPP22059 807 aa11.89□□□□□ -0.51
RAP1B-226ENST00000541968 MLLT3P42568 568 aaPredicted RBP11.89□□□□□ -0.51
RAP1B-226ENST00000541968 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
RAP1B-226ENST00000541968 BHMG1C9JSJ3 638 aaPredicted RBP11.85□□□□□ -0.51
RAP1B-226ENST00000541968 SEMA3EO15041 775 aa11.84□□□□□ -0.51
RAP1B-226ENST00000541968 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
RAP1B-226ENST00000541968 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
RAP1B-226ENST00000541968 KCTD12Q96CX2 325 aaKnown RBP11.82□□□□□ -0.52
RAP1B-226ENST00000541968 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
RAP1B-226ENST00000541968 CDHR5Q9HBB8 845 aa11.82□□□□□ -0.52
RAP1B-226ENST00000541968 KIAA1468Q9P260 1216 aa11.81□□□□□ -0.52
RAP1B-226ENST00000541968 GOLGA8CPA6NN73 597 aa11.8□□□□□ -0.52
RAP1B-226ENST00000541968 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
RAP1B-226ENST00000541968 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
RAP1B-226ENST00000541968 CERKQ8TCT0 537 aa11.78□□□□□ -0.52
RAP1B-226ENST00000541968 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
RAP1B-226ENST00000541968 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
RAP1B-226ENST00000541968 PRSS12P56730 875 aa11.76□□□□□ -0.53
RAP1B-226ENST00000541968 SEPT9Q9UHD8 586 aaPredicted RBP11.75□□□□□ -0.53
RAP1B-226ENST00000541968 PACS2Q86VP3 889 aa11.74□□□□□ -0.53
RAP1B-226ENST00000541968 WNT2BQ93097 391 aa11.74□□□□□ -0.53
RAP1B-226ENST00000541968 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
RAP1B-226ENST00000541968 NPDC1Q9NQX5 325 aaPredicted RBP11.73□□□□□ -0.53
RAP1B-226ENST00000541968 HCSTQ9UBK5 93 aa11.73□□□□□ -0.53
RAP1B-226ENST00000541968 FAM198AQ9UFP1 575 aa11.72□□□□□ -0.53
RAP1B-226ENST00000541968 NUTM2FA1L443 756 aa11.71□□□□□ -0.53
RAP1B-226ENST00000541968 PTPN5P54829 565 aa11.71□□□□□ -0.53
RAP1B-226ENST00000541968 LAPTM4BQ86VI4 370 aa11.71□□□□□ -0.53
RAP1B-226ENST00000541968 SMYD5Q6GMV2 418 aa11.69□□□□□ -0.54
RAP1B-226ENST00000541968 THSD4Q6ZMP0 1018 aa11.69□□□□□ -0.54
RAP1B-226ENST00000541968 ZFRQ96KR1 1074 aaKnown RBP11.69□□□□□ -0.54
RAP1B-226ENST00000541968 SMAPO00193 183 aa11.68□□□□□ -0.54
RAP1B-226ENST00000541968 FAM98CQ17RN3 349 aaKnown RBP11.68□□□□□ -0.54
RAP1B-226ENST00000541968 PADI6Q6TGC4 694 aa11.68□□□□□ -0.54
RAP1B-226ENST00000541968 ANKK1Q8NFD2 765 aa11.68□□□□□ -0.54
RAP1B-226ENST00000541968 RBM26Q5T8P6 1007 aaKnown RBP11.67□□□□□ -0.54
RAP1B-226ENST00000541968 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
RAP1B-226ENST00000541968 C3orf80F5H4A9 247 aa11.66□□□□□ -0.54
RAP1B-226ENST00000541968 PTGDRQ13258 359 aa11.66□□□□□ -0.54
RAP1B-226ENST00000541968 TATDN2Q93075 761 aa11.66□□□□□ -0.54
RAP1B-226ENST00000541968 RBM27Q9P2N5 1060 aaKnown RBP11.66□□□□□ -0.54
RAP1B-226ENST00000541968 NBPF26B4DH59 902 aa11.65□□□□□ -0.54
RAP1B-226ENST00000541968 NUDT18Q6ZVK8 323 aa11.64□□□□□ -0.55
RAP1B-226ENST00000541968 BCAMP50895 628 aa11.63□□□□□ -0.55
RAP1B-226ENST00000541968 TTC13Q8NBP0 860 aa11.63□□□□□ -0.55
RAP1B-226ENST00000541968 SOWAHBA6NEL2 793 aa11.61□□□□□ -0.55
RAP1B-226ENST00000541968 FCHSD2O94868 740 aa11.6□□□□□ -0.55
RAP1B-226ENST00000541968 LRCH3Q96II8 777 aa11.59□□□□□ -0.55
RAP1B-226ENST00000541968 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.59□□□□□ -0.55
RAP1B-226ENST00000541968 SAMD7Q7Z3H4 446 aa11.57□□□□□ -0.56
RAP1B-226ENST00000541968 WBP1LQ9NX94 342 aa11.55□□□□□ -0.56
RAP1B-226ENST00000541968 PLA2G2EQ9NZK7 142 aa11.55□□□□□ -0.56
RAP1B-226ENST00000541968 FAM161AQ3B820 660 aa11.54□□□□□ -0.56
RAP1B-226ENST00000541968 HPS5Q9UPZ3 1129 aa11.54□□□□□ -0.56
RAP1B-226ENST00000541968 TULP1O00294 542 aaPredicted RBP11.53□□□□□ -0.56
RAP1B-226ENST00000541968 HDGFP51858 240 aaKnown RBP11.53□□□□□ -0.56
RAP1B-226ENST00000541968 HIC1Q14526 733 aa11.53□□□□□ -0.56
RAP1B-226ENST00000541968 EYA1Q99502 592 aa11.53□□□□□ -0.56
RAP1B-226ENST00000541968 TSR3Q9UJK0 312 aaKnown RBP11.53□□□□□ -0.56
RAP1B-226ENST00000541968 GPIHBP1Q8IV16 184 aa11.52□□□□□ -0.57
RAP1B-226ENST00000541968 ADGRG1Q9Y653 693 aa11.52□□□□□ -0.57
RAP1B-226ENST00000541968 RNF40O75150 1001 aa11.51□□□□□ -0.57
RAP1B-226ENST00000541968 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
RAP1B-226ENST00000541968 GNPATO15228 680 aa11.5□□□□□ -0.57
RAP1B-226ENST00000541968 GPR37O15354 613 aa11.5□□□□□ -0.57
RAP1B-226ENST00000541968 FECHP22830 423 aa11.5□□□□□ -0.57
RAP1B-226ENST00000541968 PPP4CP60510 307 aa11.5□□□□□ -0.57
RAP1B-226ENST00000541968 SWT1Q5T5J6 900 aaKnown RBP11.49□□□□□ -0.57
RAP1B-226ENST00000541968 NYAP1Q6ZVC0 841 aa11.47□□□□□ -0.57
RAP1B-226ENST00000541968 RCCD1A6NED2 376 aa11.45□□□□□ -0.58
RAP1B-226ENST00000541968 DNAJB2P25686 324 aa11.45□□□□□ -0.58
RAP1B-226ENST00000541968 OATP04181 439 aa11.44□□□□□ -0.58
RAP1B-226ENST00000541968 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
RAP1B-226ENST00000541968 SLC4A3P48751 1232 aa11.42□□□□□ -0.58
RAP1B-226ENST00000541968 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
RAP1B-226ENST00000541968 PXYLP1Q8TE99 480 aa11.42□□□□□ -0.58
RAP1B-226ENST00000541968 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
RAP1B-226ENST00000541968 METTL3Q86U44 580 aaKnown RBP11.4□□□□□ -0.58
RAP1B-226ENST00000541968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.39□□□□□ -0.59
RAP1B-226ENST00000541968 LMOD2Q6P5Q4 547 aa11.38□□□□□ -0.59
RAP1B-226ENST00000541968 APLP1P51693 650 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms