RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-226ENST00000541968 AEBP2Q6ZN18 517 aaPredicted RBP28.1■■■□□ 2.09
RAP1B-226ENST00000541968 CHIC1Q5VXU3 224 aa27.13■■□□□ 1.93
RAP1B-226ENST00000541968 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
RAP1B-226ENST00000541968 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
RAP1B-226ENST00000541968 FOXD1Q16676 465 aa22.23■■□□□ 1.15
RAP1B-226ENST00000541968 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
RAP1B-226ENST00000541968 PPP6R1Q9UPN7 881 aa21.16■□□□□ 0.98
RAP1B-226ENST00000541968 ADRA2BP18089 450 aa21.14■□□□□ 0.97
RAP1B-226ENST00000541968 PIAS4Q8N2W9 510 aaPredicted RBP20.91■□□□□ 0.94
RAP1B-226ENST00000541968 MSH5O43196 834 aa20.59■□□□□ 0.89
RAP1B-226ENST00000541968 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
RAP1B-226ENST00000541968 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
RAP1B-226ENST00000541968 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
RAP1B-226ENST00000541968 MAPK8IP2Q13387 824 aaPredicted RBP19.27■□□□□ 0.68
RAP1B-226ENST00000541968 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
RAP1B-226ENST00000541968 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
RAP1B-226ENST00000541968 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
RAP1B-226ENST00000541968 KCNA4P22459 653 aa18.49■□□□□ 0.55
RAP1B-226ENST00000541968 HOXD11P31277 338 aaPredicted RBP18.49■□□□□ 0.55
RAP1B-226ENST00000541968 RNF216Q9NWF9 866 aaPredicted RBP18.48■□□□□ 0.55
RAP1B-226ENST00000541968 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
RAP1B-226ENST00000541968 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
RAP1B-226ENST00000541968 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
RAP1B-226ENST00000541968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.42
RAP1B-226ENST00000541968 RNF39Q9H2S5 420 aa17.62■□□□□ 0.41
RAP1B-226ENST00000541968 SLC4A1APQ9BWU0 796 aaKnown RBP17.55■□□□□ 0.4
RAP1B-226ENST00000541968 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
RAP1B-226ENST00000541968 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
RAP1B-226ENST00000541968 C1QBPQ07021 282 aaKnown RBP17.38■□□□□ 0.37
RAP1B-226ENST00000541968 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
RAP1B-226ENST00000541968 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.32
RAP1B-226ENST00000541968 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
RAP1B-226ENST00000541968 ZBTB22O15209 634 aa16.99■□□□□ 0.31
RAP1B-226ENST00000541968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
RAP1B-226ENST00000541968 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
RAP1B-226ENST00000541968 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
RAP1B-226ENST00000541968 CAPN15O75808 1086 aa16.92■□□□□ 0.3
RAP1B-226ENST00000541968 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
RAP1B-226ENST00000541968 APLP2Q06481 763 aa16.88■□□□□ 0.29
RAP1B-226ENST00000541968 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
RAP1B-226ENST00000541968 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
RAP1B-226ENST00000541968 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
RAP1B-226ENST00000541968 DSG3P32926 999 aa16.67■□□□□ 0.26
RAP1B-226ENST00000541968 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
RAP1B-226ENST00000541968 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
RAP1B-226ENST00000541968 ABCB7O75027 752 aa16.58■□□□□ 0.24
RAP1B-226ENST00000541968 ATXN8OSP0DMR3 200 aa16.48■□□□□ 0.23
RAP1B-226ENST00000541968 POLA2Q14181 598 aa16.42■□□□□ 0.22
RAP1B-226ENST00000541968 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
RAP1B-226ENST00000541968 FBLN2P98095 1184 aa15.91■□□□□ 0.14
RAP1B-226ENST00000541968 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
RAP1B-226ENST00000541968 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
RAP1B-226ENST00000541968 MKRN4PQ13434 485 aaPredicted RBP15.84■□□□□ 0.13
RAP1B-226ENST00000541968 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
RAP1B-226ENST00000541968 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
RAP1B-226ENST00000541968 SPDYE2Q495Y8 402 aa15.62■□□□□ 0.09
RAP1B-226ENST00000541968 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
RAP1B-226ENST00000541968 ZNF692Q9BU19 519 aaPredicted RBP15.55■□□□□ 0.08
RAP1B-226ENST00000541968 REM2Q8IYK8 340 aaPredicted RBP15.49■□□□□ 0.07
RAP1B-226ENST00000541968 SSUH2Q9Y2M2 353 aa15.45■□□□□ 0.06
RAP1B-226ENST00000541968 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
RAP1B-226ENST00000541968 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
RAP1B-226ENST00000541968 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
RAP1B-226ENST00000541968 PITPNM1O00562 1244 aa15.33■□□□□ 0.04
RAP1B-226ENST00000541968 SPDYE1Q8NFV5 336 aaPredicted RBP15.25■□□□□ 0.03
RAP1B-226ENST00000541968 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
RAP1B-226ENST00000541968 POTEHQ6S545 545 aa15.24■□□□□ 0.03
RAP1B-226ENST00000541968 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
RAP1B-226ENST00000541968 FKBP8Q14318 412 aa15.09■□□□□ 0.01
RAP1B-226ENST00000541968 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
RAP1B-226ENST00000541968 PRR29P0C7W0 189 aa15.04■□□□□ -0
RAP1B-226ENST00000541968 PROM2Q8N271 834 aa14.99□□□□□ -0.01
RAP1B-226ENST00000541968 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
RAP1B-226ENST00000541968 PRKAR2AP13861 404 aaKnown RBP14.95□□□□□ -0.02
RAP1B-226ENST00000541968 CHADLQ6NUI6 762 aa14.89□□□□□ -0.03
RAP1B-226ENST00000541968 CREBZFQ9NS37 354 aa14.75□□□□□ -0.05
RAP1B-226ENST00000541968 HAX1O00165 279 aa14.74□□□□□ -0.05
RAP1B-226ENST00000541968 FARP1Q9Y4F1 1045 aaPredicted RBP14.7□□□□□ -0.06
RAP1B-226ENST00000541968 MIER1Q8N108 512 aa14.62□□□□□ -0.07
RAP1B-226ENST00000541968 FBXO3Q9UK99 471 aa14.6□□□□□ -0.07
RAP1B-226ENST00000541968 EVX2Q03828 476 aa14.58□□□□□ -0.08
RAP1B-226ENST00000541968 C19orf67A6NJJ6 358 aa14.57□□□□□ -0.08
RAP1B-226ENST00000541968 PLCD3Q8N3E9 789 aa14.56□□□□□ -0.08
RAP1B-226ENST00000541968 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
RAP1B-226ENST00000541968 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
RAP1B-226ENST00000541968 NPM1P06748 294 aaKnown RBP eCLIP14.5□□□□□ -0.09
RAP1B-226ENST00000541968 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
RAP1B-226ENST00000541968 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
RAP1B-226ENST00000541968 VASPP50552 380 aaPredicted RBP14.43□□□□□ -0.1
RAP1B-226ENST00000541968 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
RAP1B-226ENST00000541968 ZBTB47Q9UFB7 747 aaPredicted RBP14.37□□□□□ -0.11
RAP1B-226ENST00000541968 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
RAP1B-226ENST00000541968 TSPYL2Q9H2G4 693 aaPredicted RBP14.3□□□□□ -0.12
RAP1B-226ENST00000541968 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
RAP1B-226ENST00000541968 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
RAP1B-226ENST00000541968 GABBR2O75899 941 aa14.26□□□□□ -0.13
RAP1B-226ENST00000541968 ZNF579Q8NAF0 562 aaKnown RBP14.26□□□□□ -0.13
RAP1B-226ENST00000541968 NUBP1P53384 320 aa14.24□□□□□ -0.13
RAP1B-226ENST00000541968 PHF12Q96QT6 1004 aa14.22□□□□□ -0.13
RAP1B-226ENST00000541968 IFNLR1Q8IU57 520 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms