RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 TCERG1O14776 1098 aaKnown RBP12.84□□□□□ -0.35
CLDN2-202ENST00000540876 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
CLDN2-202ENST00000540876 BACH2Q9BYV9 841 aa12.83□□□□□ -0.36
CLDN2-202ENST00000540876 RGS3P49796 1198 aa12.82□□□□□ -0.36
CLDN2-202ENST00000540876 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
CLDN2-202ENST00000540876 CD109Q6YHK3 1445 aa12.82□□□□□ -0.36
CLDN2-202ENST00000540876 ARHGAP5Q13017 1502 aa12.8□□□□□ -0.36
CLDN2-202ENST00000540876 AFAP1Q8N556 730 aa12.8□□□□□ -0.36
CLDN2-202ENST00000540876 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
CLDN2-202ENST00000540876 EFCAB2Q5VUJ9 269 aa12.79□□□□□ -0.36
CLDN2-202ENST00000540876 ARXQ96QS3 562 aa12.79□□□□□ -0.36
CLDN2-202ENST00000540876 RRP7BPQ9NSQ0 103 aa12.79□□□□□ -0.36
CLDN2-202ENST00000540876 PTPRKQ15262 1439 aa12.79□□□□□ -0.36
CLDN2-202ENST00000540876 PLCH2O75038 1416 aa12.78□□□□□ -0.36
CLDN2-202ENST00000540876 RAPGEF3O95398 923 aa12.78□□□□□ -0.36
CLDN2-202ENST00000540876 PRDM4Q9UKN5 801 aa12.77□□□□□ -0.36
CLDN2-202ENST00000540876 AEBP2Q6ZN18 517 aaPredicted RBP12.76□□□□□ -0.37
CLDN2-202ENST00000540876 CDC42BPAQ5VT25 1732 aa12.76□□□□□ -0.37
CLDN2-202ENST00000540876 PTPN23Q9H3S7 1636 aa12.76□□□□□ -0.37
CLDN2-202ENST00000540876 CAMSAP2Q08AD1 1489 aa12.76□□□□□ -0.37
CLDN2-202ENST00000540876 FANCAO15360 1455 aa12.75□□□□□ -0.37
CLDN2-202ENST00000540876 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
CLDN2-202ENST00000540876 MIA2Q96PC5 1412 aa12.75□□□□□ -0.37
CLDN2-202ENST00000540876 CLCN1P35523 988 aa12.75□□□□□ -0.37
CLDN2-202ENST00000540876 CDC42BPBQ9Y5S2 1711 aa12.74□□□□□ -0.37
CLDN2-202ENST00000540876 SENP3-EIF4A1A0A087X0R7 540 aa12.74□□□□□ -0.37
CLDN2-202ENST00000540876 POGKQ9P215 609 aa12.74□□□□□ -0.37
CLDN2-202ENST00000540876 ARHGEF12Q9NZN5 1544 aa12.74□□□□□ -0.37
CLDN2-202ENST00000540876 TSPOAP1O95153 1857 aa12.74□□□□□ -0.37
CLDN2-202ENST00000540876 DIP2BQ9P265 1576 aa12.74□□□□□ -0.37
CLDN2-202ENST00000540876 L1TD1Q5T7N2 865 aaKnown RBP12.73□□□□□ -0.37
CLDN2-202ENST00000540876 MS4A1P11836 297 aa12.73□□□□□ -0.37
CLDN2-202ENST00000540876 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
CLDN2-202ENST00000540876 ABCA9Q8IUA7 1624 aa12.73□□□□□ -0.37
CLDN2-202ENST00000540876 ABCC5O15440 1437 aa12.72□□□□□ -0.37
CLDN2-202ENST00000540876 TRAPPC8Q9Y2L5 1435 aa12.72□□□□□ -0.37
CLDN2-202ENST00000540876 PDCL3Q9H2J4 239 aa12.72□□□□□ -0.37
CLDN2-202ENST00000540876 SCAPERQ9BY12 1400 aa12.72□□□□□ -0.37
CLDN2-202ENST00000540876 SAMD9LQ8IVG5 1584 aa12.72□□□□□ -0.37
CLDN2-202ENST00000540876 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
CLDN2-202ENST00000540876 TSPY4P0CV99 314 aa12.71□□□□□ -0.37
CLDN2-202ENST00000540876 TSPY10P0CW01 314 aa12.71□□□□□ -0.37
CLDN2-202ENST00000540876 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.37
CLDN2-202ENST00000540876 PREX2Q70Z35 1606 aa12.71□□□□□ -0.38
CLDN2-202ENST00000540876 RNF123Q5XPI4 1314 aa12.7□□□□□ -0.38
CLDN2-202ENST00000540876 MYO5CQ9NQX4 1742 aa12.7□□□□□ -0.38
CLDN2-202ENST00000540876 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
CLDN2-202ENST00000540876 DAPK1P53355 1430 aa12.69□□□□□ -0.38
CLDN2-202ENST00000540876 ADGRL1O94910 1474 aa12.69□□□□□ -0.38
CLDN2-202ENST00000540876 MBD5Q9P267 1494 aa12.69□□□□□ -0.38
CLDN2-202ENST00000540876 EXOC6Q8TAG9 804 aa12.69□□□□□ -0.38
CLDN2-202ENST00000540876 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
CLDN2-202ENST00000540876 SKAP1Q86WV1 359 aa12.68□□□□□ -0.38
CLDN2-202ENST00000540876 TONSLQ96HA7 1378 aa12.68□□□□□ -0.38
CLDN2-202ENST00000540876 ITSN2Q9NZM3 1697 aa12.68□□□□□ -0.38
CLDN2-202ENST00000540876 PRKRIP1Q9H875 184 aaPredicted RBP12.67□□□□□ -0.38
CLDN2-202ENST00000540876 KIF13AQ9H1H9 1805 aa12.66□□□□□ -0.38
CLDN2-202ENST00000540876 CENPJQ9HC77 1338 aaPredicted RBP12.66□□□□□ -0.38
CLDN2-202ENST00000540876 COL17A1Q9UMD9 1497 aaPredicted RBP12.66□□□□□ -0.38
CLDN2-202ENST00000540876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLDN2-202ENST00000540876 SPAG9O60271 1321 aaKnown RBP12.65□□□□□ -0.38
CLDN2-202ENST00000540876 MAP3K4Q9Y6R4 1608 aa12.65□□□□□ -0.38
CLDN2-202ENST00000540876 CNGB1Q14028 1251 aaPredicted RBP12.65□□□□□ -0.38
CLDN2-202ENST00000540876 GLI2P10070 1586 aa12.64□□□□□ -0.39
CLDN2-202ENST00000540876 C9orf84Q5VXU9 1444 aa12.64□□□□□ -0.39
CLDN2-202ENST00000540876 XRCC6P12956 609 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLDN2-202ENST00000540876 PANK2Q9BZ23 570 aa12.63□□□□□ -0.39
CLDN2-202ENST00000540876 NAP1L2Q9ULW6 460 aaPredicted RBP12.63□□□□□ -0.39
CLDN2-202ENST00000540876 ABCC1P33527 1531 aa12.63□□□□□ -0.39
CLDN2-202ENST00000540876 TPM2P07951 284 aa12.63□□□□□ -0.39
CLDN2-202ENST00000540876 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
CLDN2-202ENST00000540876 CCDC141Q6ZP82 1450 aa12.62□□□□□ -0.39
CLDN2-202ENST00000540876 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
CLDN2-202ENST00000540876 ZHX1Q9UKY1 873 aaPredicted RBP12.61□□□□□ -0.39
CLDN2-202ENST00000540876 DNMT1P26358 1616 aaKnown RBP12.61□□□□□ -0.39
CLDN2-202ENST00000540876 NCOA1Q15788 1441 aa12.61□□□□□ -0.39
CLDN2-202ENST00000540876 PPRC1Q5VV67 1664 aaKnown RBP12.61□□□□□ -0.39
CLDN2-202ENST00000540876 GOLGA6L3A6NEY3 463 aa12.61□□□□□ -0.39
CLDN2-202ENST00000540876 TAF7LQ5H9L4 462 aa12.61□□□□□ -0.39
CLDN2-202ENST00000540876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLDN2-202ENST00000540876 NAIPQ13075 1403 aa12.61□□□□□ -0.39
CLDN2-202ENST00000540876 HSPA5P11021 654 aaKnown RBP12.6□□□□□ -0.39
CLDN2-202ENST00000540876 RSPH4AQ5TD94 716 aa12.6□□□□□ -0.39
CLDN2-202ENST00000540876 DENND4BO75064 1496 aaPredicted RBP12.6□□□□□ -0.39
CLDN2-202ENST00000540876 KIF15Q9NS87 1388 aa12.59□□□□□ -0.39
CLDN2-202ENST00000540876 ARAP3Q8WWN8 1544 aa12.59□□□□□ -0.39
CLDN2-202ENST00000540876 ANKRD30AQ9BXX3 1397 aa12.59□□□□□ -0.39
CLDN2-202ENST00000540876 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
CLDN2-202ENST00000540876 PLEKHH2Q8IVE3 1493 aa12.59□□□□□ -0.39
CLDN2-202ENST00000540876 NEO1Q92859 1461 aa12.59□□□□□ -0.39
CLDN2-202ENST00000540876 KDM6BO15054 1643 aa12.58□□□□□ -0.4
CLDN2-202ENST00000540876 POGZQ7Z3K3 1410 aa12.58□□□□□ -0.4
CLDN2-202ENST00000540876 CNTLNQ9NXG0 1405 aa12.58□□□□□ -0.4
CLDN2-202ENST00000540876 ESPNB1AK53 854 aa12.58□□□□□ -0.4
CLDN2-202ENST00000540876 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
CLDN2-202ENST00000540876 CANXP27824 592 aaKnown RBP12.58□□□□□ -0.4
CLDN2-202ENST00000540876 FOXD1Q16676 465 aa12.58□□□□□ -0.4
CLDN2-202ENST00000540876 YEATS2Q9ULM3 1422 aa12.57□□□□□ -0.4
CLDN2-202ENST00000540876 ARID3AQ99856 593 aa12.57□□□□□ -0.4
CLDN2-202ENST00000540876 GZF1Q9H116 711 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms