RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
NPC1-202ENST00000540608 CDC42BPBQ9Y5S2 1711 aa16.59■□□□□ 0.25
NPC1-202ENST00000540608 KTN1Q86UP2 1357 aaKnown RBP16.59■□□□□ 0.25
NPC1-202ENST00000540608 PREX2Q70Z35 1606 aa16.58■□□□□ 0.24
NPC1-202ENST00000540608 LRPPRCP42704 1394 aaKnown RBP16.57■□□□□ 0.24
NPC1-202ENST00000540608 ST20-MTHFSA0A0A6YYL1 179 aa16.57■□□□□ 0.24
NPC1-202ENST00000540608 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
NPC1-202ENST00000540608 RALBP1Q15311 655 aa16.56■□□□□ 0.24
NPC1-202ENST00000540608 CCDC136Q96JN2 1154 aa16.56■□□□□ 0.24
NPC1-202ENST00000540608 BRD4O60885 1362 aaPredicted RBP16.56■□□□□ 0.24
NPC1-202ENST00000540608 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
NPC1-202ENST00000540608 MYBBP1AQ9BQG0 1328 aaKnown RBP16.55■□□□□ 0.24
NPC1-202ENST00000540608 DCAF11Q8TEB1 546 aa16.54■□□□□ 0.24
NPC1-202ENST00000540608 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
NPC1-202ENST00000540608 FAM135AQ9P2D6 1515 aa16.53■□□□□ 0.24
NPC1-202ENST00000540608 TTC37Q6PGP7 1564 aa16.52■□□□□ 0.24
NPC1-202ENST00000540608 SYCP2Q9BX26 1530 aa16.52■□□□□ 0.23
NPC1-202ENST00000540608 E9PCH4 1651 aa16.51■□□□□ 0.23
NPC1-202ENST00000540608 RSPH4AQ5TD94 716 aa16.5■□□□□ 0.23
NPC1-202ENST00000540608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.5■□□□□ 0.23
NPC1-202ENST00000540608 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
NPC1-202ENST00000540608 NOP58Q9Y2X3 529 aaKnown RBP16.49■□□□□ 0.23
NPC1-202ENST00000540608 ERCC6L2Q5T890 1561 aa16.49■□□□□ 0.23
NPC1-202ENST00000540608 SENP3-EIF4A1A0A087X0R7 540 aa16.48■□□□□ 0.23
NPC1-202ENST00000540608 MAST1Q9Y2H9 1570 aa16.46■□□□□ 0.23
NPC1-202ENST00000540608 PRAG1Q86YV5 1406 aa16.46■□□□□ 0.22
NPC1-202ENST00000540608 PARD3Q8TEW0 1356 aa16.45■□□□□ 0.22
NPC1-202ENST00000540608 NLRP13Q86W25 1043 aa16.45■□□□□ 0.22
NPC1-202ENST00000540608 TRPM1Q7Z4N2 1603 aa16.45■□□□□ 0.22
NPC1-202ENST00000540608 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
NPC1-202ENST00000540608 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
NPC1-202ENST00000540608 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
NPC1-202ENST00000540608 CCDC144AA2RUR9 1427 aa16.44■□□□□ 0.22
NPC1-202ENST00000540608 UNC13BO14795 1591 aa16.44■□□□□ 0.22
NPC1-202ENST00000540608 PDE3BQ13370 1112 aa16.44■□□□□ 0.22
NPC1-202ENST00000540608 PLA2R1Q13018 1463 aa16.44■□□□□ 0.22
NPC1-202ENST00000540608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.227e-8■□□□□ 9
NPC1-202ENST00000540608 MYO5CQ9NQX4 1742 aa16.43■□□□□ 0.22
NPC1-202ENST00000540608 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
NPC1-202ENST00000540608 PER1O15534 1290 aaPredicted RBP16.42■□□□□ 0.22
NPC1-202ENST00000540608 PAK3O75914 559 aaPredicted RBP16.42■□□□□ 0.22
NPC1-202ENST00000540608 IPO9Q96P70 1041 aaKnown RBP16.42■□□□□ 0.22
NPC1-202ENST00000540608 RCAN3Q9UKA8 241 aa16.42■□□□□ 0.22
NPC1-202ENST00000540608 RGL3Q3MIN7 710 aa16.42■□□□□ 0.22
NPC1-202ENST00000540608 GPRASP1Q5JY77 1395 aa16.42■□□□□ 0.22
NPC1-202ENST00000540608 PLEKHH2Q8IVE3 1493 aa16.41■□□□□ 0.22
NPC1-202ENST00000540608 WASHC2CQ9Y4E1 1318 aa16.41■□□□□ 0.22
NPC1-202ENST00000540608 PLXNC1O60486 1568 aa16.41■□□□□ 0.22
NPC1-202ENST00000540608 NBPF1Q3BBV0 1214 aa16.39■□□□□ 0.21
NPC1-202ENST00000540608 A2MP01023 1474 aa16.39■□□□□ 0.21
NPC1-202ENST00000540608 LAMC1P11047 1609 aa16.38■□□□□ 0.21
NPC1-202ENST00000540608 IQGAP3Q86VI3 1631 aa16.38■□□□□ 0.21
NPC1-202ENST00000540608 EXOC6Q8TAG9 804 aa16.38■□□□□ 0.21
NPC1-202ENST00000540608 INSRP06213 1382 aa16.38■□□□□ 0.21
NPC1-202ENST00000540608 COL17A1Q9UMD9 1497 aaPredicted RBP16.37■□□□□ 0.21
NPC1-202ENST00000540608 DEKP35659 375 aaKnown RBP16.36■□□□□ 0.21
NPC1-202ENST00000540608 PRDM15P57071 1507 aaPredicted RBP16.36■□□□□ 0.21
NPC1-202ENST00000540608 DUOX2Q9NRD8 1548 aa16.36■□□□□ 0.21
NPC1-202ENST00000540608 TCERG1O14776 1098 aaKnown RBP16.36■□□□□ 0.21
NPC1-202ENST00000540608 TESK2Q96S53 571 aa16.36■□□□□ 0.21
NPC1-202ENST00000540608 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
NPC1-202ENST00000540608 PLCH2O75038 1416 aa16.35■□□□□ 0.21
NPC1-202ENST00000540608 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
NPC1-202ENST00000540608 ZCCHC11Q5TAX3 1644 aaKnown RBP16.35■□□□□ 0.21
NPC1-202ENST00000540608 SALL2Q9Y467 1007 aaPredicted RBP16.35■□□□□ 0.21
NPC1-202ENST00000540608 MAGI2Q86UL8 1455 aa16.34■□□□□ 0.21
NPC1-202ENST00000540608 DISP3Q9P2K9 1392 aa16.33■□□□□ 0.2
NPC1-202ENST00000540608 ERBINQ96RT1 1412 aa16.33■□□□□ 0.2
NPC1-202ENST00000540608 BLMP54132 1417 aaPredicted RBP16.32■□□□□ 0.2
NPC1-202ENST00000540608 NBR1Q14596 966 aa16.32■□□□□ 0.2
NPC1-202ENST00000540608 PANK3Q9H999 370 aa16.32■□□□□ 0.2
NPC1-202ENST00000540608 EIF2AK4Q9P2K8 1649 aaKnown RBP16.32■□□□□ 0.2
NPC1-202ENST00000540608 CDCA7LQ96GN5 454 aa16.32■□□□□ 0.2
NPC1-202ENST00000540608 TRAPPC8Q9Y2L5 1435 aa16.31■□□□□ 0.2
NPC1-202ENST00000540608 ATP10AO60312 1499 aa16.31■□□□□ 0.2
NPC1-202ENST00000540608 CC2D1BQ5T0F9 858 aaKnown RBP16.31■□□□□ 0.2
NPC1-202ENST00000540608 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
NPC1-202ENST00000540608 ABCC1P33527 1531 aa16.31■□□□□ 0.2
NPC1-202ENST00000540608 UHRF1BP1LA0JNW5 1464 aa16.3■□□□□ 0.2
NPC1-202ENST00000540608 MS4A1P11836 297 aa16.3■□□□□ 0.2
NPC1-202ENST00000540608 TMF1P82094 1093 aa16.3■□□□□ 0.2
NPC1-202ENST00000540608 PDE4AP27815 886 aa16.28■□□□□ 0.2
NPC1-202ENST00000540608 BACH2Q9BYV9 841 aa16.26■□□□□ 0.19
NPC1-202ENST00000540608 AFAP1Q8N556 730 aa16.25■□□□□ 0.19
NPC1-202ENST00000540608 RNF17Q9BXT8 1623 aaKnown RBP16.23■□□□□ 0.19
NPC1-202ENST00000540608 SPAG9O60271 1321 aaKnown RBP16.23■□□□□ 0.19
NPC1-202ENST00000540608 PLIN1O60240 522 aa16.23■□□□□ 0.19
NPC1-202ENST00000540608 RTL5Q5HYW3 569 aaPredicted RBP16.22■□□□□ 0.19
NPC1-202ENST00000540608 ZFYVE16Q7Z3T8 1539 aa16.21■□□□□ 0.19
NPC1-202ENST00000540608 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
NPC1-202ENST00000540608 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
NPC1-202ENST00000540608 ADAMTS8Q9UP79 889 aa16.21■□□□□ 0.19
NPC1-202ENST00000540608 WDR7Q9Y4E6 1490 aa16.2■□□□□ 0.18
NPC1-202ENST00000540608 RTEL1-TNFRSF6BF6WH68 1400 aa16.2■□□□□ 0.18
NPC1-202ENST00000540608 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
NPC1-202ENST00000540608 ARAP3Q8WWN8 1544 aa16.18■□□□□ 0.18
NPC1-202ENST00000540608 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
NPC1-202ENST00000540608 TRPM2O94759 1503 aa16.18■□□□□ 0.18
NPC1-202ENST00000540608 PPP2R1AP30153 589 aa16.18■□□□□ 0.18
NPC1-202ENST00000540608 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms