RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 ARHGEF5Q12774 1597 aa16.79■□□□□ 0.28
NEK6-213ENST00000540326 SAMD9LQ8IVG5 1584 aa16.79■□□□□ 0.28
NEK6-213ENST00000540326 FAM135AQ9P2D6 1515 aa16.79■□□□□ 0.28
NEK6-213ENST00000540326 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
NEK6-213ENST00000540326 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
NEK6-213ENST00000540326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.282e-8■□□□□ 10.5
NEK6-213ENST00000540326 CDC42BPBQ9Y5S2 1711 aa16.77■□□□□ 0.28
NEK6-213ENST00000540326 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.27
NEK6-213ENST00000540326 RNF123Q5XPI4 1314 aa16.76■□□□□ 0.27
NEK6-213ENST00000540326 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
NEK6-213ENST00000540326 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
NEK6-213ENST00000540326 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
NEK6-213ENST00000540326 RALBP1Q15311 655 aa16.75■□□□□ 0.27
NEK6-213ENST00000540326 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
NEK6-213ENST00000540326 BRD4O60885 1362 aaPredicted RBP16.74■□□□□ 0.27
NEK6-213ENST00000540326 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
NEK6-213ENST00000540326 LRPPRCP42704 1394 aaKnown RBP16.74■□□□□ 0.27
NEK6-213ENST00000540326 SYCP2Q9BX26 1530 aa16.73■□□□□ 0.27
NEK6-213ENST00000540326 PRAG1Q86YV5 1406 aa16.73■□□□□ 0.27
NEK6-213ENST00000540326 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
NEK6-213ENST00000540326 E9PCH4 1651 aa16.71■□□□□ 0.27
NEK6-213ENST00000540326 ARHGAP5Q13017 1502 aa16.7■□□□□ 0.26
NEK6-213ENST00000540326 KTN1Q86UP2 1357 aaKnown RBP16.7■□□□□ 0.26
NEK6-213ENST00000540326 TRPM1Q7Z4N2 1603 aa16.7■□□□□ 0.26
NEK6-213ENST00000540326 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
NEK6-213ENST00000540326 TTC37Q6PGP7 1564 aa16.69■□□□□ 0.26
NEK6-213ENST00000540326 NLRP13Q86W25 1043 aa16.68■□□□□ 0.26
NEK6-213ENST00000540326 A2MP01023 1474 aa16.67■□□□□ 0.26
NEK6-213ENST00000540326 PER1O15534 1290 aaPredicted RBP16.67■□□□□ 0.26
NEK6-213ENST00000540326 PLEKHH2Q8IVE3 1493 aa16.66■□□□□ 0.26
NEK6-213ENST00000540326 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
NEK6-213ENST00000540326 CC2D1BQ5T0F9 858 aaKnown RBP16.66■□□□□ 0.26
NEK6-213ENST00000540326 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.66■□□□□ 0.268e-6■■■■□ 23.7
NEK6-213ENST00000540326 DISP3Q9P2K9 1392 aa16.65■□□□□ 0.26
NEK6-213ENST00000540326 UNC13BO14795 1591 aa16.64■□□□□ 0.25
NEK6-213ENST00000540326 TESK2Q96S53 571 aa16.64■□□□□ 0.25
NEK6-213ENST00000540326 RRP1P56182 461 aaKnown RBP16.63■□□□□ 0.25
NEK6-213ENST00000540326 GPRASP1Q5JY77 1395 aa16.63■□□□□ 0.25
NEK6-213ENST00000540326 PANK3Q9H999 370 aa16.62■□□□□ 0.25
NEK6-213ENST00000540326 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
NEK6-213ENST00000540326 EXOC6Q8TAG9 804 aa16.62■□□□□ 0.25
NEK6-213ENST00000540326 CHD1O14646 1710 aa16.62■□□□□ 0.25
NEK6-213ENST00000540326 MAST1Q9Y2H9 1570 aa16.61■□□□□ 0.25
NEK6-213ENST00000540326 COL17A1Q9UMD9 1497 aaPredicted RBP16.61■□□□□ 0.25
NEK6-213ENST00000540326 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
NEK6-213ENST00000540326 MYO5CQ9NQX4 1742 aa16.6■□□□□ 0.25
NEK6-213ENST00000540326 PRDM15P57071 1507 aaPredicted RBP16.6■□□□□ 0.25
NEK6-213ENST00000540326 ERCC6L2Q5T890 1561 aa16.59■□□□□ 0.25
NEK6-213ENST00000540326 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
NEK6-213ENST00000540326 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.25
NEK6-213ENST00000540326 ERBINQ96RT1 1412 aa16.58■□□□□ 0.25
NEK6-213ENST00000540326 NOP58Q9Y2X3 529 aaKnown RBP16.58■□□□□ 0.25
NEK6-213ENST00000540326 PLXNC1O60486 1568 aa16.58■□□□□ 0.24
NEK6-213ENST00000540326 TMF1P82094 1093 aa16.58■□□□□ 0.24
NEK6-213ENST00000540326 DUOX2Q9NRD8 1548 aa16.56■□□□□ 0.24
NEK6-213ENST00000540326 PDE3BQ13370 1112 aa16.56■□□□□ 0.24
NEK6-213ENST00000540326 ABCC2Q92887 1545 aa16.55■□□□□ 0.24
NEK6-213ENST00000540326 WASHC2CQ9Y4E1 1318 aa16.55■□□□□ 0.24
NEK6-213ENST00000540326 LAMC1P11047 1609 aa16.55■□□□□ 0.24
NEK6-213ENST00000540326 SHROOM2Q13796 1616 aa16.54■□□□□ 0.24
NEK6-213ENST00000540326 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
NEK6-213ENST00000540326 EIF2AK4Q9P2K8 1649 aaKnown RBP16.53■□□□□ 0.24
NEK6-213ENST00000540326 PLIN1O60240 522 aa16.53■□□□□ 0.24
NEK6-213ENST00000540326 ATP10AO60312 1499 aa16.53■□□□□ 0.24
NEK6-213ENST00000540326 EFCAB2Q5VUJ9 269 aa16.52■□□□□ 0.24
NEK6-213ENST00000540326 MAGI2Q86UL8 1455 aa16.52■□□□□ 0.23
NEK6-213ENST00000540326 PLCH2O75038 1416 aa16.52■□□□□ 0.23
NEK6-213ENST00000540326 NBR1Q14596 966 aa16.51■□□□□ 0.23
NEK6-213ENST00000540326 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
NEK6-213ENST00000540326 TRAPPC8Q9Y2L5 1435 aa16.51■□□□□ 0.23
NEK6-213ENST00000540326 BLMP54132 1417 aaPredicted RBP16.49■□□□□ 0.23
NEK6-213ENST00000540326 ADAMTS8Q9UP79 889 aa16.49■□□□□ 0.23
NEK6-213ENST00000540326 AFAP1Q8N556 730 aa16.49■□□□□ 0.23
NEK6-213ENST00000540326 NPM2Q86SE8 214 aaKnown RBP16.47■□□□□ 0.23
NEK6-213ENST00000540326 KNSTRNQ9Y448 316 aa16.47■□□□□ 0.23
NEK6-213ENST00000540326 RNF17Q9BXT8 1623 aaKnown RBP16.46■□□□□ 0.23
NEK6-213ENST00000540326 SPAG9O60271 1321 aaKnown RBP16.46■□□□□ 0.23
NEK6-213ENST00000540326 WDR7Q9Y4E6 1490 aa16.46■□□□□ 0.23
NEK6-213ENST00000540326 ABCC1P33527 1531 aa16.46■□□□□ 0.23
NEK6-213ENST00000540326 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
NEK6-213ENST00000540326 ZCCHC11Q5TAX3 1644 aaKnown RBP16.46■□□□□ 0.23
NEK6-213ENST00000540326 TCERG1O14776 1098 aaKnown RBP16.44■□□□□ 0.22
NEK6-213ENST00000540326 PPP2R1AP30153 589 aa16.44■□□□□ 0.22
NEK6-213ENST00000540326 CRBNQ96SW2 442 aa16.44■□□□□ 0.22
NEK6-213ENST00000540326 MADDQ8WXG6 1647 aa16.44■□□□□ 0.22
NEK6-213ENST00000540326 SKAP1Q86WV1 359 aa16.43■□□□□ 0.22
NEK6-213ENST00000540326 INSRP06213 1382 aa16.43■□□□□ 0.22
NEK6-213ENST00000540326 PDE4AP27815 886 aa16.42■□□□□ 0.22
NEK6-213ENST00000540326 ZMYM4Q5VZL5 1548 aa16.42■□□□□ 0.22
NEK6-213ENST00000540326 DEKP35659 375 aaKnown RBP16.42■□□□□ 0.22
NEK6-213ENST00000540326 WDR43Q15061 677 aaKnown RBP eCLIP16.42■□□□□ 0.22
NEK6-213ENST00000540326 AMER1Q5JTC6 1135 aaPredicted RBP16.42■□□□□ 0.22
NEK6-213ENST00000540326 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
NEK6-213ENST00000540326 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
NEK6-213ENST00000540326 IQGAP1P46940 1657 aa16.4■□□□□ 0.22
NEK6-213ENST00000540326 PLEKHH1Q9ULM0 1364 aa16.4■□□□□ 0.22
NEK6-213ENST00000540326 TRPM2O94759 1503 aa16.39■□□□□ 0.21
NEK6-213ENST00000540326 BACH2Q9BYV9 841 aa16.39■□□□□ 0.21
NEK6-213ENST00000540326 SCAF11Q99590 1463 aaKnown RBP16.39■□□□□ 0.21
NEK6-213ENST00000540326 CDCA8Q53HL2 280 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms