RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PLIN1O60240 522 aa18.35■□□□□ 0.53
BNIP3-202ENST00000540159 MYBBP1AQ9BQG0 1328 aaKnown RBP18.35■□□□□ 0.53
BNIP3-202ENST00000540159 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
BNIP3-202ENST00000540159 PANK3Q9H999 370 aa18.34■□□□□ 0.53
BNIP3-202ENST00000540159 FAM135AQ9P2D6 1515 aa18.34■□□□□ 0.53
BNIP3-202ENST00000540159 CCDC141Q6ZP82 1450 aa18.34■□□□□ 0.53
BNIP3-202ENST00000540159 SKAP1Q86WV1 359 aa18.34■□□□□ 0.53
BNIP3-202ENST00000540159 SMG6Q86US8 1419 aaKnown RBP18.33■□□□□ 0.53
BNIP3-202ENST00000540159 SAMD9LQ8IVG5 1584 aa18.33■□□□□ 0.53
BNIP3-202ENST00000540159 EXOC6Q8TAG9 804 aa18.33■□□□□ 0.52
BNIP3-202ENST00000540159 ERCC6L2Q5T890 1561 aa18.32■□□□□ 0.52
BNIP3-202ENST00000540159 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
BNIP3-202ENST00000540159 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
BNIP3-202ENST00000540159 DISP3Q9P2K9 1392 aa18.32■□□□□ 0.52
BNIP3-202ENST00000540159 NBR1Q14596 966 aa18.32■□□□□ 0.52
BNIP3-202ENST00000540159 NPM2Q86SE8 214 aaKnown RBP18.32■□□□□ 0.52
BNIP3-202ENST00000540159 POLR1AO95602 1720 aaPredicted RBP18.32■□□□□ 0.52
BNIP3-202ENST00000540159 ERICH6BQ5W0A0 696 aa18.31■□□□□ 0.52
BNIP3-202ENST00000540159 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
BNIP3-202ENST00000540159 FANCIQ9NVI1 1328 aa18.3■□□□□ 0.52
BNIP3-202ENST00000540159 CDC42BPBQ9Y5S2 1711 aa18.29■□□□□ 0.52
BNIP3-202ENST00000540159 KTN1Q86UP2 1357 aaKnown RBP18.29■□□□□ 0.52
BNIP3-202ENST00000540159 SHANK2Q9UPX8 1470 aa18.28■□□□□ 0.52
BNIP3-202ENST00000540159 RALBP1Q15311 655 aa18.28■□□□□ 0.52
BNIP3-202ENST00000540159 TTC37Q6PGP7 1564 aa18.28■□□□□ 0.52
BNIP3-202ENST00000540159 PAK3O75914 559 aaPredicted RBP18.28■□□□□ 0.52
BNIP3-202ENST00000540159 PLA2R1Q13018 1463 aa18.28■□□□□ 0.52
BNIP3-202ENST00000540159 NLRP13Q86W25 1043 aa18.27■□□□□ 0.52
BNIP3-202ENST00000540159 PRAG1Q86YV5 1406 aa18.27■□□□□ 0.52
BNIP3-202ENST00000540159 ARID4BQ4LE39 1312 aaPredicted RBP18.27■□□□□ 0.51
BNIP3-202ENST00000540159 RCAN3Q9UKA8 241 aa18.26■□□□□ 0.51
BNIP3-202ENST00000540159 TESK2Q96S53 571 aa18.25■□□□□ 0.51
BNIP3-202ENST00000540159 A2MP01023 1474 aa18.25■□□□□ 0.51
BNIP3-202ENST00000540159 PER1O15534 1290 aaPredicted RBP18.24■□□□□ 0.51
BNIP3-202ENST00000540159 RRP1P56182 461 aaKnown RBP18.24■□□□□ 0.51
BNIP3-202ENST00000540159 BRD4O60885 1362 aaPredicted RBP18.23■□□□□ 0.51
BNIP3-202ENST00000540159 KDM5DQ9BY66 1539 aa18.22■□□□□ 0.51
BNIP3-202ENST00000540159 ARHGEF12Q9NZN5 1544 aa18.22■□□□□ 0.51
BNIP3-202ENST00000540159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.22■□□□□ 0.514e-6■■■■□ 24.3
BNIP3-202ENST00000540159 TMF1P82094 1093 aa18.21■□□□□ 0.51
BNIP3-202ENST00000540159 RSPH4AQ5TD94 716 aa18.21■□□□□ 0.51
BNIP3-202ENST00000540159 CHD1O14646 1710 aa18.2■□□□□ 0.5
BNIP3-202ENST00000540159 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
BNIP3-202ENST00000540159 EFCAB2Q5VUJ9 269 aa18.19■□□□□ 0.5
BNIP3-202ENST00000540159 PREX2Q70Z35 1606 aa18.19■□□□□ 0.5
BNIP3-202ENST00000540159 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
BNIP3-202ENST00000540159 TRAPPC8Q9Y2L5 1435 aa18.19■□□□□ 0.5
BNIP3-202ENST00000540159 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
BNIP3-202ENST00000540159 CCDC146Q8IYE0 955 aa18.18■□□□□ 0.5
BNIP3-202ENST00000540159 ARHGEF5Q12774 1597 aa18.18■□□□□ 0.5
BNIP3-202ENST00000540159 SPAG9O60271 1321 aaKnown RBP18.17■□□□□ 0.5
BNIP3-202ENST00000540159 RNF123Q5XPI4 1314 aa18.17■□□□□ 0.5
BNIP3-202ENST00000540159 ERBINQ96RT1 1412 aa18.16■□□□□ 0.5
BNIP3-202ENST00000540159 KIF3BO15066 747 aa18.16■□□□□ 0.5
BNIP3-202ENST00000540159 KNSTRNQ9Y448 316 aa18.16■□□□□ 0.5
BNIP3-202ENST00000540159 PARD3Q8TEW0 1356 aa18.16■□□□□ 0.5
BNIP3-202ENST00000540159 C20orf194Q5TEA3 1177 aa18.15■□□□□ 0.5
BNIP3-202ENST00000540159 NOP58Q9Y2X3 529 aaKnown RBP18.15■□□□□ 0.5
BNIP3-202ENST00000540159 TRPM1Q7Z4N2 1603 aa18.14■□□□□ 0.49
BNIP3-202ENST00000540159 ANP32AP39687 249 aaKnown RBP18.13■□□□□ 0.49
BNIP3-202ENST00000540159 TNNT2P45379 298 aaPredicted RBP18.12■□□□□ 0.49
BNIP3-202ENST00000540159 CRBNQ96SW2 442 aa18.12■□□□□ 0.49
BNIP3-202ENST00000540159 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
BNIP3-202ENST00000540159 WDR43Q15061 677 aaKnown RBP eCLIP18.11■□□□□ 0.49
BNIP3-202ENST00000540159 CFAP70Q5T0N1 1121 aa18.1■□□□□ 0.49
BNIP3-202ENST00000540159 COL17A1Q9UMD9 1497 aaPredicted RBP18.1■□□□□ 0.49
BNIP3-202ENST00000540159 NUTM2DQ5VT03 806 aaPredicted RBP18.09■□□□□ 0.49
BNIP3-202ENST00000540159 PPP2R1AP30153 589 aa18.07■□□□□ 0.48
BNIP3-202ENST00000540159 ABCC2Q92887 1545 aa18.06■□□□□ 0.48
BNIP3-202ENST00000540159 MYO5CQ9NQX4 1742 aa18.06■□□□□ 0.48
BNIP3-202ENST00000540159 ZBTB47Q9UFB7 747 aaPredicted RBP18.05■□□□□ 0.48
BNIP3-202ENST00000540159 PLCH2O75038 1416 aa18.05■□□□□ 0.48
BNIP3-202ENST00000540159 GPRASP1Q5JY77 1395 aa18.05■□□□□ 0.48
BNIP3-202ENST00000540159 MAGI2Q86UL8 1455 aa18.05■□□□□ 0.48
BNIP3-202ENST00000540159 NEUROD2Q15784 382 aa18.05■□□□□ 0.48
BNIP3-202ENST00000540159 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
BNIP3-202ENST00000540159 E9PCH4 1651 aa18.05■□□□□ 0.48
BNIP3-202ENST00000540159 SCAPERQ9BY12 1400 aa18.04■□□□□ 0.48
BNIP3-202ENST00000540159 IPO9Q96P70 1041 aaKnown RBP18.03■□□□□ 0.48
BNIP3-202ENST00000540159 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
BNIP3-202ENST00000540159 ADGRF5Q8IZF2 1346 aa18.02■□□□□ 0.48
BNIP3-202ENST00000540159 PLEKHH1Q9ULM0 1364 aa18.02■□□□□ 0.48
BNIP3-202ENST00000540159 PDE4AP27815 886 aa18.02■□□□□ 0.48
BNIP3-202ENST00000540159 UNC13BO14795 1591 aa18.02■□□□□ 0.47
BNIP3-202ENST00000540159 PRDM15P57071 1507 aaPredicted RBP18.01■□□□□ 0.47
BNIP3-202ENST00000540159 AMER1Q5JTC6 1135 aaPredicted RBP18.01■□□□□ 0.47
BNIP3-202ENST00000540159 GGT6Q6P531 493 aa18.01■□□□□ 0.47
BNIP3-202ENST00000540159 UGGT1Q9NYU2 1555 aa18.01■□□□□ 0.47
BNIP3-202ENST00000540159 APAF1O14727 1248 aa18.01■□□□□ 0.47
BNIP3-202ENST00000540159 DEKP35659 375 aaKnown RBP18■□□□□ 0.47
BNIP3-202ENST00000540159 PDE3BQ13370 1112 aa18■□□□□ 0.47
BNIP3-202ENST00000540159 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
BNIP3-202ENST00000540159 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
BNIP3-202ENST00000540159 MAST1Q9Y2H9 1570 aa17.99■□□□□ 0.47
BNIP3-202ENST00000540159 IQGAP3Q86VI3 1631 aa17.99■□□□□ 0.47
BNIP3-202ENST00000540159 SAFB2Q14151 953 aaKnown RBP eCLIP17.99■□□□□ 0.47
BNIP3-202ENST00000540159 TMEM132EQ6IEE7 984 aa17.99■□□□□ 0.47
BNIP3-202ENST00000540159 CFAP65Q6ZU64 1925 aaKnown RBP17.99■□□□□ 0.47
BNIP3-202ENST00000540159 ZCCHC11Q5TAX3 1644 aaKnown RBP17.98■□□□□ 0.47
BNIP3-202ENST00000540159 SLC4A3P48751 1232 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms