RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 PPP4R3BQ5MIZ7 849 aa7.89□□□□□ -1.15
C2CD3-214ENST00000540057 EMILIN3Q9NT22 766 aa7.89□□□□□ -1.15
C2CD3-214ENST00000540057 PSEN2P49810 448 aa7.88□□□□□ -1.15
C2CD3-214ENST00000540057 DMRTA1Q5VZB9 504 aa7.88□□□□□ -1.15
C2CD3-214ENST00000540057 MROH2BQ7Z745 1585 aa7.88□□□□□ -1.15
C2CD3-214ENST00000540057 ANO8Q9HCE9 1232 aaPredicted RBP7.87□□□□□ -1.15
C2CD3-214ENST00000540057 FANCD2Q9BXW9 1451 aa7.87□□□□□ -1.15
C2CD3-214ENST00000540057 FOSBP53539 338 aa7.86□□□□□ -1.15
C2CD3-214ENST00000540057 ADGRD1Q6QNK2 874 aa7.86□□□□□ -1.15
C2CD3-214ENST00000540057 EVI5O60447 810 aa7.85□□□□□ -1.15
C2CD3-214ENST00000540057 ZNF454Q8N9F8 522 aa7.85□□□□□ -1.15
C2CD3-214ENST00000540057 ARAP1Q96P48 1450 aa7.84□□□□□ -1.15
C2CD3-214ENST00000540057 CAMK2BQ13554 666 aa7.84□□□□□ -1.15
C2CD3-214ENST00000540057 URB2Q14146 1524 aaKnown RBP7.83□□□□□ -1.16
C2CD3-214ENST00000540057 TK2O00142 265 aa7.83□□□□□ -1.16
C2CD3-214ENST00000540057 HRO43593 1189 aa7.83□□□□□ -1.16
C2CD3-214ENST00000540057 JPH4Q96JJ6 628 aa7.83□□□□□ -1.16
C2CD3-214ENST00000540057 KCNK17Q96T54 332 aa7.83□□□□□ -1.16
C2CD3-214ENST00000540057 BCL2L12Q9HB09 334 aa7.82□□□□□ -1.16
C2CD3-214ENST00000540057 ZNF608Q9ULD9 1512 aaPredicted RBP7.8□□□□□ -1.16
C2CD3-214ENST00000540057 MAP3K9P80192 1104 aa7.8□□□□□ -1.16
C2CD3-214ENST00000540057 SPRYD3Q8NCJ5 442 aa7.8□□□□□ -1.16
C2CD3-214ENST00000540057 ADAM33Q9BZ11 813 aa7.79□□□□□ -1.16
C2CD3-214ENST00000540057 CFTRP13569 1480 aa7.79□□□□□ -1.16
C2CD3-214ENST00000540057 VPS9D1Q9Y2B5 631 aa7.78□□□□□ -1.16
C2CD3-214ENST00000540057 DPYSL4O14531 572 aa7.77□□□□□ -1.17
C2CD3-214ENST00000540057 ZDHHC16Q969W1 377 aa7.77□□□□□ -1.17
C2CD3-214ENST00000540057 SLC4A5Q9BY07 1137 aa7.77□□□□□ -1.17
C2CD3-214ENST00000540057 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.77□□□□□ -1.17
C2CD3-214ENST00000540057 PCDHGA10Q9Y5H3 936 aa7.77□□□□□ -1.17
C2CD3-214ENST00000540057 WIZO95785 1651 aa7.76□□□□□ -1.17
C2CD3-214ENST00000540057 IFT140Q96RY7 1462 aa7.76□□□□□ -1.17
C2CD3-214ENST00000540057 CHD1O14646 1710 aa7.75□□□□□ -1.17
C2CD3-214ENST00000540057 PTPREP23469 700 aa7.75□□□□□ -1.17
C2CD3-214ENST00000540057 PAXIP1Q6ZW49 1069 aaPredicted RBP7.75□□□□□ -1.17
C2CD3-214ENST00000540057 KCNH8Q96L42 1107 aa7.75□□□□□ -1.17
C2CD3-214ENST00000540057 ZBED2Q9BTP6 218 aa7.75□□□□□ -1.17
C2CD3-214ENST00000540057 RSF1Q96T23 1441 aaPredicted RBP7.75□□□□□ -1.17
C2CD3-214ENST00000540057 CFAP44Q96MT7 982 aa7.74□□□□□ -1.17
C2CD3-214ENST00000540057 EIF4G3O43432 1585 aaKnown RBP7.73□□□□□ -1.17
C2CD3-214ENST00000540057 PHF14O94880 888 aa7.73□□□□□ -1.17
C2CD3-214ENST00000540057 BHMG1C9JSJ3 638 aaPredicted RBP7.72□□□□□ -1.17
C2CD3-214ENST00000540057 TYW1BQ6NUM6 668 aa7.72□□□□□ -1.17
C2CD3-214ENST00000540057 PPP1R3GB7ZBB8 358 aa7.7□□□□□ -1.18
C2CD3-214ENST00000540057 COL9A1P20849 921 aa7.7□□□□□ -1.18
C2CD3-214ENST00000540057 PDIA6Q15084 440 aa7.7□□□□□ -1.18
C2CD3-214ENST00000540057 FBXW7Q969H0 707 aa7.7□□□□□ -1.18
C2CD3-214ENST00000540057 KCTD12Q96CX2 325 aaKnown RBP7.69□□□□□ -1.18
C2CD3-214ENST00000540057 HCSTQ9UBK5 93 aa7.69□□□□□ -1.18
C2CD3-214ENST00000540057 TOPBP1Q92547 1522 aa7.68□□□□□ -1.18
C2CD3-214ENST00000540057 PROX2Q3B8N5 592 aa7.68□□□□□ -1.18
C2CD3-214ENST00000540057 PRDM2Q13029 1718 aa7.68□□□□□ -1.18
C2CD3-214ENST00000540057 AQRO60306 1485 aaKnown RBP eCLIP7.68□□□□□ -1.18
C2CD3-214ENST00000540057 E2F4Q16254 413 aa7.67□□□□□ -1.18
C2CD3-214ENST00000540057 DDX12PQ92771 950 aa7.67□□□□□ -1.18
C2CD3-214ENST00000540057 EPAS1Q99814 870 aa7.67□□□□□ -1.18
C2CD3-214ENST00000540057 ARIH1Q9Y4X5 557 aaPredicted RBP7.67□□□□□ -1.18
C2CD3-214ENST00000540057 CLASP1Q7Z460 1538 aa7.66□□□□□ -1.18
C2CD3-214ENST00000540057 TARBP1Q13395 1621 aaKnown RBP7.65□□□□□ -1.18
C2CD3-214ENST00000540057 C6orf132Q5T0Z8 1188 aa7.65□□□□□ -1.18
C2CD3-214ENST00000540057 SPDYE16A6NNV3 312 aaPredicted RBP7.64□□□□□ -1.19
C2CD3-214ENST00000540057 PRIM1P49642 420 aaKnown RBP7.64□□□□□ -1.19
C2CD3-214ENST00000540057 THSD4Q6ZMP0 1018 aa7.64□□□□□ -1.19
C2CD3-214ENST00000540057 STAC3Q96MF2 364 aa7.64□□□□□ -1.19
C2CD3-214ENST00000540057 EN1Q05925 392 aaPredicted RBP7.63□□□□□ -1.19
C2CD3-214ENST00000540057 NBR1Q14596 966 aa7.63□□□□□ -1.19
C2CD3-214ENST00000540057 MRPL50Q8N5N7 158 aaKnown RBP7.63□□□□□ -1.19
C2CD3-214ENST00000540057 RBM33Q96EV2 1170 aaKnown RBP7.63□□□□□ -1.19
C2CD3-214ENST00000540057 NBPF3Q9H094 633 aa7.63□□□□□ -1.19
C2CD3-214ENST00000540057 RABGEF1Q9UJ41 708 aa7.63□□□□□ -1.19
C2CD3-214ENST00000540057 TSR1Q2NL82 804 aaKnown RBP7.62□□□□□ -1.19
C2CD3-214ENST00000540057 TSHZ2Q9NRE2 1034 aa7.62□□□□□ -1.19
C2CD3-214ENST00000540057 PLA2G2EQ9NZK7 142 aa7.62□□□□□ -1.19
C2CD3-214ENST00000540057 ABCC8Q09428 1581 aa7.62□□□□□ -1.19
C2CD3-214ENST00000540057 TOP2AP11388 1531 aaKnown RBP7.62□□□□□ -1.19
C2CD3-214ENST00000540057 DNMBPQ6XZF7 1577 aa7.61□□□□□ -1.19
C2CD3-214ENST00000540057 SYNJ1O43426 1573 aa7.6□□□□□ -1.19
C2CD3-214ENST00000540057 WNT2BQ93097 391 aa7.6□□□□□ -1.19
C2CD3-214ENST00000540057 WDR70Q9NW82 654 aa7.6□□□□□ -1.19
C2CD3-214ENST00000540057 TRIM6-TRIM34B2RNG4 842 aa7.59□□□□□ -1.19
C2CD3-214ENST00000540057 ONECUT3O60422 494 aaPredicted RBP7.59□□□□□ -1.19
C2CD3-214ENST00000540057 PTPN5P54829 565 aa7.59□□□□□ -1.19
C2CD3-214ENST00000540057 KIAA1468Q9P260 1216 aa7.59□□□□□ -1.19
C2CD3-214ENST00000540057 GAPVD1Q14C86 1478 aa7.59□□□□□ -1.19
C2CD3-214ENST00000540057 SNAPC4Q5SXM2 1469 aa7.59□□□□□ -1.19
C2CD3-214ENST00000540057 MAP3K7O43318 606 aa7.58□□□□□ -1.2
C2CD3-214ENST00000540057 TDRD9Q8NDG6 1382 aaKnown RBP7.58□□□□□ -1.2
C2CD3-214ENST00000540057 POLA1P09884 1462 aaPredicted RBP7.57□□□□□ -1.2
C2CD3-214ENST00000540057 GOLGA8CPA6NN73 597 aa7.57□□□□□ -1.2
C2CD3-214ENST00000540057 LAPTM4BQ86VI4 370 aa7.57□□□□□ -1.2
C2CD3-214ENST00000540057 CHMP7Q8WUX9 453 aaPredicted RBP7.57□□□□□ -1.2
C2CD3-214ENST00000540057 RAD54L2Q9Y4B4 1467 aa7.56□□□□□ -1.2
C2CD3-214ENST00000540057 OSBPP22059 807 aa7.56□□□□□ -1.2
C2CD3-214ENST00000540057 SEPT9Q9UHD8 586 aaPredicted RBP7.56□□□□□ -1.2
C2CD3-214ENST00000540057 TSKSQ9UJT2 592 aa7.56□□□□□ -1.2
C2CD3-214ENST00000540057 KIF13AQ9H1H9 1805 aa7.55□□□□□ -1.2
C2CD3-214ENST00000540057 GRXCR2A6NFK2 248 aa7.55□□□□□ -1.2
C2CD3-214ENST00000540057 CDHR5Q9HBB8 845 aa7.55□□□□□ -1.2
C2CD3-214ENST00000540057 FAM198AQ9UFP1 575 aa7.55□□□□□ -1.2
C2CD3-214ENST00000540057 BCAMP50895 628 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms