RNA–Protein interactions for RNA: ENST00000539363.2

ITGA10-204, Transcript of integrin subunit alpha 10, humanhuman

TSL 1 (best) BASIC

Gene ITGA10, Length 4,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA10-204ENST00000539363 MCCP23508 829 aa12.38□□□□□ -0.43
ITGA10-204ENST00000539363 SMC4Q9NTJ3 1288 aa12.38□□□□□ -0.43
ITGA10-204ENST00000539363 ITPRIPQ8IWB1 547 aa12.37□□□□□ -0.43
ITGA10-204ENST00000539363 TCERG1O14776 1098 aaKnown RBP12.37□□□□□ -0.43
ITGA10-204ENST00000539363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.37□□□□□ -0.43
ITGA10-204ENST00000539363 HSCBQ8IWL3 235 aa12.37□□□□□ -0.43
ITGA10-204ENST00000539363 PMFBP1Q8TBY8 1022 aa12.37□□□□□ -0.43
ITGA10-204ENST00000539363 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
ITGA10-204ENST00000539363 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
ITGA10-204ENST00000539363 CCDC146Q8IYE0 955 aa12.36□□□□□ -0.43
ITGA10-204ENST00000539363 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
ITGA10-204ENST00000539363 CC2D2AQ9P2K1 1620 aa12.36□□□□□ -0.43
ITGA10-204ENST00000539363 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
ITGA10-204ENST00000539363 EFCAB5A4FU69 1503 aa12.35□□□□□ -0.43
ITGA10-204ENST00000539363 TOP2BQ02880 1626 aa12.35□□□□□ -0.43
ITGA10-204ENST00000539363 NGEFQ8N5V2 710 aa12.35□□□□□ -0.43
ITGA10-204ENST00000539363 PRG4Q92954 1404 aaPredicted RBP12.35□□□□□ -0.43
ITGA10-204ENST00000539363 CDK11BP21127 795 aaKnown RBP12.35□□□□□ -0.43
ITGA10-204ENST00000539363 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.34□□□□□ -0.43
ITGA10-204ENST00000539363 COG3Q96JB2 828 aa12.34□□□□□ -0.43
ITGA10-204ENST00000539363 HMMRO75330 724 aa12.34□□□□□ -0.43
ITGA10-204ENST00000539363 MINK1Q8N4C8 1332 aaPredicted RBP12.33□□□□□ -0.44
ITGA10-204ENST00000539363 AFAP1Q8N556 730 aa12.33□□□□□ -0.44
ITGA10-204ENST00000539363 RRBP1Q9P2E9 1410 aaKnown RBP12.32□□□□□ -0.44
ITGA10-204ENST00000539363 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
ITGA10-204ENST00000539363 KIAA1211Q6ZU35 1233 aa12.32□□□□□ -0.44
ITGA10-204ENST00000539363 APBB1O00213 710 aa12.32□□□□□ -0.44
ITGA10-204ENST00000539363 PTMAP06454 111 aaKnown RBP12.31□□□□□ -0.44
ITGA10-204ENST00000539363 MIA2Q96PC5 1412 aa12.31□□□□□ -0.44
ITGA10-204ENST00000539363 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
ITGA10-204ENST00000539363 RBM19Q9Y4C8 960 aaKnown RBP12.31□□□□□ -0.44
ITGA10-204ENST00000539363 LTV1Q96GA3 475 aaPredicted RBP12.3□□□□□ -0.44
ITGA10-204ENST00000539363 ZBED9Q6R2W3 1325 aa12.3□□□□□ -0.44
ITGA10-204ENST00000539363 E9PSI1 815 aa12.3□□□□□ -0.44
ITGA10-204ENST00000539363 TROQ12816 1431 aaPredicted RBP12.3□□□□□ -0.44
ITGA10-204ENST00000539363 NAP1L2Q9ULW6 460 aaPredicted RBP12.29□□□□□ -0.44
ITGA10-204ENST00000539363 CCDC7Q96M83 1385 aa12.29□□□□□ -0.44
ITGA10-204ENST00000539363 DNMBPQ6XZF7 1577 aa12.28□□□□□ -0.44
ITGA10-204ENST00000539363 ZNF330Q9Y3S2 320 aaPredicted RBP12.28□□□□□ -0.44
ITGA10-204ENST00000539363 ARHGAP5Q13017 1502 aa12.28□□□□□ -0.44
ITGA10-204ENST00000539363 RRP7AQ9Y3A4 280 aaKnown RBP12.28□□□□□ -0.44
ITGA10-204ENST00000539363 GOLGA6L4A6NEF3 574 aa12.28□□□□□ -0.44
ITGA10-204ENST00000539363 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.44
ITGA10-204ENST00000539363 HFM1A2PYH4 1435 aa12.27□□□□□ -0.45
ITGA10-204ENST00000539363 KIF7Q2M1P5 1343 aa12.27□□□□□ -0.45
ITGA10-204ENST00000539363 SLC4A10Q6U841 1118 aa12.26□□□□□ -0.45
ITGA10-204ENST00000539363 APAF1O14727 1248 aa12.26□□□□□ -0.45
ITGA10-204ENST00000539363 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
ITGA10-204ENST00000539363 TPRNQ4KMQ1 711 aa12.26□□□□□ -0.45
ITGA10-204ENST00000539363 EHBP1L1Q8N3D4 1523 aa12.25□□□□□ -0.45
ITGA10-204ENST00000539363 SNAPC4Q5SXM2 1469 aa12.25□□□□□ -0.45
ITGA10-204ENST00000539363 KIAA0586Q9BVV6 1533 aa12.25□□□□□ -0.45
ITGA10-204ENST00000539363 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
ITGA10-204ENST00000539363 GPATCH3Q96I76 525 aa12.24□□□□□ -0.45
ITGA10-204ENST00000539363 ZKSCAN2Q63HK3 967 aa12.23□□□□□ -0.45
ITGA10-204ENST00000539363 ABCA10Q8WWZ4 1543 aa12.23□□□□□ -0.45
ITGA10-204ENST00000539363 TEFQ10587 303 aa12.23□□□□□ -0.45
ITGA10-204ENST00000539363 C9orf84Q5VXU9 1444 aa12.23□□□□□ -0.45
ITGA10-204ENST00000539363 BICRAQ9NZM4 1560 aa12.23□□□□□ -0.45
ITGA10-204ENST00000539363 GLIPR1L2Q4G1C9 344 aa12.22□□□□□ -0.45
ITGA10-204ENST00000539363 GORABQ5T7V8 394 aa12.22□□□□□ -0.45
ITGA10-204ENST00000539363 C1orf141Q5JVX7 400 aa12.22□□□□□ -0.45
ITGA10-204ENST00000539363 TAF7LQ5H9L4 462 aa12.22□□□□□ -0.45
ITGA10-204ENST00000539363 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
ITGA10-204ENST00000539363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.45
ITGA10-204ENST00000539363 ELL2O00472 640 aaPredicted RBP12.21□□□□□ -0.45
ITGA10-204ENST00000539363 PLCB2Q00722 1185 aa12.21□□□□□ -0.46
ITGA10-204ENST00000539363 CENPQQ7L2Z9 268 aaPredicted RBP12.21□□□□□ -0.46
ITGA10-204ENST00000539363 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
ITGA10-204ENST00000539363 CFAP70Q5T0N1 1121 aa12.2□□□□□ -0.46
ITGA10-204ENST00000539363 NRDCO43847 1150 aa12.2□□□□□ -0.46
ITGA10-204ENST00000539363 KIAA1107Q9UPP5 1409 aa12.2□□□□□ -0.46
ITGA10-204ENST00000539363 CHMP3Q9Y3E7 222 aa12.2□□□□□ -0.46
ITGA10-204ENST00000539363 LAMC3Q9Y6N6 1575 aa12.2□□□□□ -0.46
ITGA10-204ENST00000539363 CNTLNQ9NXG0 1405 aa12.2□□□□□ -0.46
ITGA10-204ENST00000539363 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
ITGA10-204ENST00000539363 RUNDC1Q96C34 613 aa12.2□□□□□ -0.46
ITGA10-204ENST00000539363 PSME1Q06323 249 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 TRIM6-TRIM34B2RNG4 842 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 SLC52A1Q9NWF4 448 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 TIAM1Q13009 1591 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 DNTTIP2Q5QJE6 756 aaKnown RBP12.19□□□□□ -0.46
ITGA10-204ENST00000539363 BCL2L13Q9BXK5 485 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 WASHC2AQ641Q2 1341 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 HECW1Q76N89 1606 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 PTMSP20962 102 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 DNAJC5BQ9UF47 199 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 SCAPERQ9BY12 1400 aa12.19□□□□□ -0.46
ITGA10-204ENST00000539363 GOLGA6L6A8MZA4 724 aa12.18□□□□□ -0.46
ITGA10-204ENST00000539363 MFAP1P55081 439 aaKnown RBP12.18□□□□□ -0.46
ITGA10-204ENST00000539363 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
ITGA10-204ENST00000539363 RIPK4P57078 832 aa12.18□□□□□ -0.46
ITGA10-204ENST00000539363 API5Q9BZZ5 524 aaKnown RBP12.17□□□□□ -0.46
ITGA10-204ENST00000539363 L1TD1Q5T7N2 865 aaKnown RBP12.17□□□□□ -0.46
ITGA10-204ENST00000539363 BRD4O60885 1362 aaPredicted RBP12.17□□□□□ -0.46
ITGA10-204ENST00000539363 TMX4Q9H1E5 349 aaPredicted RBP12.16□□□□□ -0.46
ITGA10-204ENST00000539363 DDX19BQ9UMR2 479 aa12.16□□□□□ -0.46
ITGA10-204ENST00000539363 EVA1CP58658 441 aa12.16□□□□□ -0.46
ITGA10-204ENST00000539363 EXOC6Q8TAG9 804 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms