RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
GGA3-202ENST00000538886 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
GGA3-202ENST00000538886 ATP10AO60312 1499 aa12.36□□□□□ -0.43
GGA3-202ENST00000538886 MAP3K1Q13233 1512 aa12.36□□□□□ -0.43
GGA3-202ENST00000538886 ARHGEF12Q9NZN5 1544 aa12.36□□□□□ -0.43
GGA3-202ENST00000538886 ZMYM3Q14202 1370 aa12.35□□□□□ -0.43
GGA3-202ENST00000538886 RRBP1Q9P2E9 1410 aaKnown RBP12.34□□□□□ -0.43
GGA3-202ENST00000538886 ANKLE2Q86XL3 938 aa12.34□□□□□ -0.43
GGA3-202ENST00000538886 KDM4FA0A1W2PPD8 638 aa12.32□□□□□ -0.44
GGA3-202ENST00000538886 ZFYVE16Q7Z3T8 1539 aa12.31□□□□□ -0.44
GGA3-202ENST00000538886 TMEM132EQ6IEE7 984 aa12.31□□□□□ -0.44
GGA3-202ENST00000538886 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
GGA3-202ENST00000538886 CCDC144AA2RUR9 1427 aa12.31□□□□□ -0.44
GGA3-202ENST00000538886 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
GGA3-202ENST00000538886 TRAK1Q9UPV9 953 aa12.3□□□□□ -0.44
GGA3-202ENST00000538886 MBD5Q9P267 1494 aa12.3□□□□□ -0.44
GGA3-202ENST00000538886 NAIPQ13075 1403 aa12.3□□□□□ -0.44
GGA3-202ENST00000538886 L3MBTL2Q969R5 705 aa12.29□□□□□ -0.44
GGA3-202ENST00000538886 PIP4K2BP78356 416 aa12.29□□□□□ -0.44
GGA3-202ENST00000538886 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
GGA3-202ENST00000538886 CARD11Q9BXL7 1154 aa12.29□□□□□ -0.44
GGA3-202ENST00000538886 SLC52A1Q9NWF4 448 aa12.29□□□□□ -0.44
GGA3-202ENST00000538886 ATP7AQ04656 1500 aa12.29□□□□□ -0.44
GGA3-202ENST00000538886 SAMD9LQ8IVG5 1584 aa12.28□□□□□ -0.44
GGA3-202ENST00000538886 TMC1Q8TDI8 760 aa12.28□□□□□ -0.44
GGA3-202ENST00000538886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
GGA3-202ENST00000538886 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
GGA3-202ENST00000538886 CFAP65Q6ZU64 1925 aaKnown RBP12.27□□□□□ -0.44
GGA3-202ENST00000538886 ABCA9Q8IUA7 1624 aa12.27□□□□□ -0.44
GGA3-202ENST00000538886 CFAP43Q8NDM7 1665 aa12.27□□□□□ -0.45
GGA3-202ENST00000538886 ITSN2Q9NZM3 1697 aa12.27□□□□□ -0.45
GGA3-202ENST00000538886 TNRQ92752 1358 aa12.26□□□□□ -0.45
GGA3-202ENST00000538886 PROSER2Q86WR7 435 aaPredicted RBP12.26□□□□□ -0.45
GGA3-202ENST00000538886 HAP1P54257 671 aaPredicted RBP12.25□□□□□ -0.45
GGA3-202ENST00000538886 HFM1A2PYH4 1435 aa12.25□□□□□ -0.45
GGA3-202ENST00000538886 ABCC1P33527 1531 aa12.24□□□□□ -0.45
GGA3-202ENST00000538886 PPP6R1Q9UPN7 881 aa12.24□□□□□ -0.45
GGA3-202ENST00000538886 ROCK1Q13464 1354 aa12.24□□□□□ -0.45
GGA3-202ENST00000538886 CFAP70Q5T0N1 1121 aa12.23□□□□□ -0.45
GGA3-202ENST00000538886 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
GGA3-202ENST00000538886 SOX12O15370 315 aa12.23□□□□□ -0.45
GGA3-202ENST00000538886 LRRIQ1Q96JM4 1722 aa12.23□□□□□ -0.45
GGA3-202ENST00000538886 SRPK2P78362 688 aaKnown RBP12.23□□□□□ -0.45
GGA3-202ENST00000538886 MLH3Q9UHC1 1453 aa12.22□□□□□ -0.45
GGA3-202ENST00000538886 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.22□□□□□ -0.45
GGA3-202ENST00000538886 ARAP3Q8WWN8 1544 aa12.22□□□□□ -0.45
GGA3-202ENST00000538886 PREX2Q70Z35 1606 aa12.21□□□□□ -0.45
GGA3-202ENST00000538886 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.45
GGA3-202ENST00000538886 GLI2P10070 1586 aa12.21□□□□□ -0.45
GGA3-202ENST00000538886 CDC42BPAQ5VT25 1732 aa12.21□□□□□ -0.45
GGA3-202ENST00000538886 DIEXFQ68CQ4 756 aaKnown RBP12.2□□□□□ -0.46
GGA3-202ENST00000538886 MINK1Q8N4C8 1332 aaPredicted RBP12.2□□□□□ -0.46
GGA3-202ENST00000538886 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
GGA3-202ENST00000538886 MAGI2Q86UL8 1455 aa12.19□□□□□ -0.46
GGA3-202ENST00000538886 DUOX2Q9NRD8 1548 aa12.19□□□□□ -0.46
GGA3-202ENST00000538886 CDC42BPBQ9Y5S2 1711 aa12.19□□□□□ -0.46
GGA3-202ENST00000538886 UHRF1BP1Q6BDS2 1440 aa12.19□□□□□ -0.46
GGA3-202ENST00000538886 CFAP74Q9C0B2 1584 aa12.18□□□□□ -0.46
GGA3-202ENST00000538886 DHX57Q6P158 1386 aaKnown RBP12.18□□□□□ -0.46
GGA3-202ENST00000538886 DMRT2Q9Y5R5 561 aa12.18□□□□□ -0.46
GGA3-202ENST00000538886 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
GGA3-202ENST00000538886 HECW2Q9P2P5 1572 aa12.17□□□□□ -0.46
GGA3-202ENST00000538886 ERBINQ96RT1 1412 aa12.16□□□□□ -0.46
GGA3-202ENST00000538886 ATF3P18847 181 aa12.16□□□□□ -0.46
GGA3-202ENST00000538886 LTKP29376 864 aa12.15□□□□□ -0.46
GGA3-202ENST00000538886 KIF13AQ9H1H9 1805 aa12.15□□□□□ -0.46
GGA3-202ENST00000538886 NBPF1Q3BBV0 1214 aa12.15□□□□□ -0.46
GGA3-202ENST00000538886 ROCK2O75116 1388 aaKnown RBP12.15□□□□□ -0.47
GGA3-202ENST00000538886 MAP3K4Q9Y6R4 1608 aa12.15□□□□□ -0.47
GGA3-202ENST00000538886 ADGRF5Q8IZF2 1346 aa12.14□□□□□ -0.47
GGA3-202ENST00000538886 WAPLQ7Z5K2 1190 aa12.14□□□□□ -0.47
GGA3-202ENST00000538886 UBAP1LF5GYI3 381 aa12.14□□□□□ -0.47
GGA3-202ENST00000538886 AMOTL2Q9Y2J4 779 aa12.14□□□□□ -0.47
GGA3-202ENST00000538886 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
GGA3-202ENST00000538886 CNTLNQ9NXG0 1405 aa12.13□□□□□ -0.47
GGA3-202ENST00000538886 A0A0G2JS52 829 aa12.12□□□□□ -0.47
GGA3-202ENST00000538886 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
GGA3-202ENST00000538886 DNMT1P26358 1616 aaKnown RBP12.12□□□□□ -0.47
GGA3-202ENST00000538886 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
GGA3-202ENST00000538886 NGDNQ8NEJ9 315 aaKnown RBP12.12□□□□□ -0.47
GGA3-202ENST00000538886 NPATQ14207 1427 aa12.11□□□□□ -0.47
GGA3-202ENST00000538886 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
GGA3-202ENST00000538886 PRAM1Q96QH2 718 aa12.11□□□□□ -0.47
GGA3-202ENST00000538886 PPM1GO15355 546 aaPredicted RBP12.1□□□□□ -0.47
GGA3-202ENST00000538886 SHANK2Q9UPX8 1470 aa12.1□□□□□ -0.47
GGA3-202ENST00000538886 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
GGA3-202ENST00000538886 PTPRMP28827 1452 aa12.09□□□□□ -0.47
GGA3-202ENST00000538886 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
GGA3-202ENST00000538886 ZNF335Q9H4Z2 1342 aaPredicted RBP12.09□□□□□ -0.47
GGA3-202ENST00000538886 ST20-MTHFSA0A0A6YYL1 179 aa12.08□□□□□ -0.48
GGA3-202ENST00000538886 DDX10Q13206 875 aaKnown RBP12.08□□□□□ -0.48
GGA3-202ENST00000538886 KCNA6P17658 529 aa12.07□□□□□ -0.48
GGA3-202ENST00000538886 NUTM2GQ5VZR2 741 aa12.07□□□□□ -0.48
GGA3-202ENST00000538886 ARHGEF5Q12774 1597 aa12.07□□□□□ -0.48
GGA3-202ENST00000538886 NOS1P29475 1434 aa12.06□□□□□ -0.48
GGA3-202ENST00000538886 DIP2CQ9Y2E4 1556 aa12.06□□□□□ -0.48
GGA3-202ENST00000538886 NUTM2BA6NNL0 878 aaPredicted RBP12.06□□□□□ -0.48
GGA3-202ENST00000538886 NUTM2EB1AL46 878 aaPredicted RBP12.06□□□□□ -0.48
GGA3-202ENST00000538886 NUTM2AQ8IVF1 878 aaPredicted RBP12.06□□□□□ -0.48
GGA3-202ENST00000538886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms