RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 JPH4Q96JJ6 628 aa14.21□□□□□ -0.13
LMO3-215ENST00000537304 E9PCH4 1651 aa14.21□□□□□ -0.14
LMO3-215ENST00000537304 ADGBQ8N7X0 1667 aa14.21□□□□□ -0.14
LMO3-215ENST00000537304 NLRP13Q86W25 1043 aa14.2□□□□□ -0.14
LMO3-215ENST00000537304 CARMIL2Q6F5E8 1435 aa14.2□□□□□ -0.14
LMO3-215ENST00000537304 CHD1O14646 1710 aa14.19□□□□□ -0.14
LMO3-215ENST00000537304 ABCC5O15440 1437 aa14.19□□□□□ -0.14
LMO3-215ENST00000537304 PZPP20742 1482 aa14.19□□□□□ -0.14
LMO3-215ENST00000537304 CENPQQ7L2Z9 268 aaPredicted RBP14.17□□□□□ -0.14
LMO3-215ENST00000537304 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
LMO3-215ENST00000537304 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.17□□□□□ -0.14
LMO3-215ENST00000537304 BRPF3Q9ULD4 1205 aa14.17□□□□□ -0.14
LMO3-215ENST00000537304 RAPGEF6Q8TEU7 1601 aa14.17□□□□□ -0.14
LMO3-215ENST00000537304 GLIPR1L2Q4G1C9 344 aa14.17□□□□□ -0.14
LMO3-215ENST00000537304 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
LMO3-215ENST00000537304 FOXD1Q16676 465 aa14.15□□□□□ -0.14
LMO3-215ENST00000537304 FRAT1Q92837 279 aaPredicted RBP14.15□□□□□ -0.14
LMO3-215ENST00000537304 CDK13Q14004 1512 aaKnown RBP14.15□□□□□ -0.14
LMO3-215ENST00000537304 ADGRL2O95490 1459 aa14.15□□□□□ -0.14
LMO3-215ENST00000537304 PARD3Q8TEW0 1356 aa14.14□□□□□ -0.15
LMO3-215ENST00000537304 POLR3GLQ9BT43 218 aa14.14□□□□□ -0.15
LMO3-215ENST00000537304 NUP153P49790 1475 aaKnown RBP14.14□□□□□ -0.15
LMO3-215ENST00000537304 BLMP54132 1417 aaPredicted RBP14.14□□□□□ -0.15
LMO3-215ENST00000537304 ITSN2Q9NZM3 1697 aa14.14□□□□□ -0.15
LMO3-215ENST00000537304 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.14□□□□□ -0.15
LMO3-215ENST00000537304 L1TD1Q5T7N2 865 aaKnown RBP14.13□□□□□ -0.15
LMO3-215ENST00000537304 EIF5BO60841 1220 aaKnown RBP14.12□□□□□ -0.15
LMO3-215ENST00000537304 CARD11Q9BXL7 1154 aa14.11□□□□□ -0.15
LMO3-215ENST00000537304 EIF3AQ14152 1382 aaKnown RBP14.1□□□□□ -0.15
LMO3-215ENST00000537304 SHROOM2Q13796 1616 aa14.1□□□□□ -0.15
LMO3-215ENST00000537304 KDM2BQ8NHM5 1336 aa14.1□□□□□ -0.15
LMO3-215ENST00000537304 PRG4Q92954 1404 aaPredicted RBP14.1□□□□□ -0.15
LMO3-215ENST00000537304 PLB1Q6P1J6 1458 aa14.09□□□□□ -0.15
LMO3-215ENST00000537304 CROCC2H7BZ55 1655 aa14.09□□□□□ -0.15
LMO3-215ENST00000537304 ABCA8O94911 1581 aa14.09□□□□□ -0.15
LMO3-215ENST00000537304 CRBNQ96SW2 442 aa14.08□□□□□ -0.16
LMO3-215ENST00000537304 ANKRD30AQ9BXX3 1397 aa14.08□□□□□ -0.16
LMO3-215ENST00000537304 KDM5DQ9BY66 1539 aa14.07□□□□□ -0.16
LMO3-215ENST00000537304 BECN1Q14457 450 aa14.07□□□□□ -0.16
LMO3-215ENST00000537304 LAMC1P11047 1609 aa14.05□□□□□ -0.16
LMO3-215ENST00000537304 ARID3CA6NKF2 412 aa14.05□□□□□ -0.16
LMO3-215ENST00000537304 ZNF326Q5BKZ1 582 aaKnown RBP14.04□□□□□ -0.16
LMO3-215ENST00000537304 CAMSAP2Q08AD1 1489 aa14.04□□□□□ -0.16
LMO3-215ENST00000537304 VIRMAQ69YN4 1812 aaKnown RBP14.04□□□□□ -0.16
LMO3-215ENST00000537304 CLASP1Q7Z460 1538 aa14.04□□□□□ -0.16
LMO3-215ENST00000537304 PTPRGP23470 1445 aa14.04□□□□□ -0.16
LMO3-215ENST00000537304 PKD2Q13563 968 aa14.04□□□□□ -0.16
LMO3-215ENST00000537304 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
LMO3-215ENST00000537304 TROQ12816 1431 aaPredicted RBP14.03□□□□□ -0.16
LMO3-215ENST00000537304 CNGB1Q14028 1251 aaPredicted RBP14.03□□□□□ -0.16
LMO3-215ENST00000537304 C8orf34Q49A92 452 aa14.02□□□□□ -0.16
LMO3-215ENST00000537304 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
LMO3-215ENST00000537304 ADCY10Q96PN6 1610 aa14.01□□□□□ -0.17
LMO3-215ENST00000537304 FRAT2O75474 233 aaPredicted RBP14.01□□□□□ -0.17
LMO3-215ENST00000537304 ZMYM3Q14202 1370 aa14□□□□□ -0.17
LMO3-215ENST00000537304 CCDC144AA2RUR9 1427 aa14□□□□□ -0.17
LMO3-215ENST00000537304 ANKRD50Q9ULJ7 1429 aa14□□□□□ -0.17
LMO3-215ENST00000537304 NINLQ9Y2I6 1382 aa14□□□□□ -0.17
LMO3-215ENST00000537304 ATP10BO94823 1461 aa14□□□□□ -0.17
LMO3-215ENST00000537304 MAPK8IP3Q9UPT6 1336 aa13.99□□□□□ -0.17
LMO3-215ENST00000537304 COL17A1Q9UMD9 1497 aaPredicted RBP13.98□□□□□ -0.17
LMO3-215ENST00000537304 TRPM1Q7Z4N2 1603 aa13.98□□□□□ -0.17
LMO3-215ENST00000537304 CDCA7LQ96GN5 454 aa13.98□□□□□ -0.17
LMO3-215ENST00000537304 EIF2AK4Q9P2K8 1649 aaKnown RBP13.98□□□□□ -0.17
LMO3-215ENST00000537304 ERCC6L2Q5T890 1561 aa13.97□□□□□ -0.17
LMO3-215ENST00000537304 GPRASP1Q5JY77 1395 aa13.97□□□□□ -0.17
LMO3-215ENST00000537304 NGEFQ8N5V2 710 aa13.97□□□□□ -0.17
LMO3-215ENST00000537304 PLIN1O60240 522 aa13.96□□□□□ -0.17
LMO3-215ENST00000537304 AAMPQ13685 434 aa13.96□□□□□ -0.17
LMO3-215ENST00000537304 CFDP1Q9UEE9 299 aaPredicted RBP13.96□□□□□ -0.17
LMO3-215ENST00000537304 PER1O15534 1290 aaPredicted RBP13.95□□□□□ -0.18
LMO3-215ENST00000537304 SLC4A3P48751 1232 aa13.95□□□□□ -0.18
LMO3-215ENST00000537304 PLEKHD1A6NEE1 506 aa13.95□□□□□ -0.18
LMO3-215ENST00000537304 UPF2Q9HAU5 1272 aaKnown RBP13.94□□□□□ -0.18
LMO3-215ENST00000537304 ISY1Q9ULR0 285 aaKnown RBP13.94□□□□□ -0.18
LMO3-215ENST00000537304 NUP155O75694 1391 aa13.93□□□□□ -0.18
LMO3-215ENST00000537304 GPATCH8Q9UKJ3 1502 aaKnown RBP13.93□□□□□ -0.18
LMO3-215ENST00000537304 RRP9O43818 475 aaKnown RBP13.93□□□□□ -0.18
LMO3-215ENST00000537304 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
LMO3-215ENST00000537304 PRAG1Q86YV5 1406 aa13.93□□□□□ -0.18
LMO3-215ENST00000537304 PRDM15P57071 1507 aaPredicted RBP13.92□□□□□ -0.18
LMO3-215ENST00000537304 ZNF644Q9H582 1327 aaPredicted RBP13.92□□□□□ -0.18
LMO3-215ENST00000537304 WDR43Q15061 677 aaKnown RBP eCLIP13.92□□□□□ -0.18
LMO3-215ENST00000537304 PKNOX2Q96KN3 472 aa13.91□□□□□ -0.18
LMO3-215ENST00000537304 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
LMO3-215ENST00000537304 ABCC2Q92887 1545 aa13.91□□□□□ -0.18
LMO3-215ENST00000537304 CGNL1Q0VF96 1302 aa13.91□□□□□ -0.18
LMO3-215ENST00000537304 DUSP27Q5VZP5 1158 aa13.91□□□□□ -0.18
LMO3-215ENST00000537304 DCAF11Q8TEB1 546 aa13.91□□□□□ -0.18
LMO3-215ENST00000537304 ABCC10Q5T3U5 1492 aa13.9□□□□□ -0.18
LMO3-215ENST00000537304 SENP3-EIF4A1A0A087X0R7 540 aa13.9□□□□□ -0.18
LMO3-215ENST00000537304 GOLGA6L3A6NEY3 463 aa13.9□□□□□ -0.18
LMO3-215ENST00000537304 CLCN1P35523 988 aa13.9□□□□□ -0.18
LMO3-215ENST00000537304 TMF1P82094 1093 aa13.9□□□□□ -0.18
LMO3-215ENST00000537304 UHRF1BP1LA0JNW5 1464 aa13.89□□□□□ -0.19
LMO3-215ENST00000537304 ZNF521Q96K83 1311 aa13.89□□□□□ -0.19
LMO3-215ENST00000537304 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
LMO3-215ENST00000537304 ERBINQ96RT1 1412 aa13.89□□□□□ -0.19
LMO3-215ENST00000537304 HSP90AA1P07900 732 aaKnown RBP13.88□□□□□ -0.19
LMO3-215ENST00000537304 NKTRP30414 1462 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms