RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 FBXO41Q8TF61 875 aa13.19□□□□□ -0.3
CCDC60-203ENST00000536742 ARHGEF1Q92888 912 aaKnown RBP13.19□□□□□ -0.3
CCDC60-203ENST00000536742 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
CCDC60-203ENST00000536742 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
CCDC60-203ENST00000536742 LMTK3Q96Q04 1460 aa13.17□□□□□ -0.3
CCDC60-203ENST00000536742 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
CCDC60-203ENST00000536742 KCNV2Q8TDN2 545 aa13.17□□□□□ -0.3
CCDC60-203ENST00000536742 ARIH1Q9Y4X5 557 aaPredicted RBP13.17□□□□□ -0.3
CCDC60-203ENST00000536742 SOCS7O14512 581 aa13.15□□□□□ -0.3
CCDC60-203ENST00000536742 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
CCDC60-203ENST00000536742 PSDA5PKW4 1024 aaPredicted RBP13.14□□□□□ -0.31
CCDC60-203ENST00000536742 UPF1Q92900 1129 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC60-203ENST00000536742 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
CCDC60-203ENST00000536742 MMRN1Q13201 1228 aa13.11□□□□□ -0.31
CCDC60-203ENST00000536742 OXER1Q8TDS5 423 aa13.11□□□□□ -0.31
CCDC60-203ENST00000536742 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
CCDC60-203ENST00000536742 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
CCDC60-203ENST00000536742 PBX2P40425 430 aa13.07□□□□□ -0.32
CCDC60-203ENST00000536742 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
CCDC60-203ENST00000536742 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
CCDC60-203ENST00000536742 CHD1O14646 1710 aa13.04□□□□□ -0.32
CCDC60-203ENST00000536742 ZNF608Q9ULD9 1512 aaPredicted RBP13.03□□□□□ -0.32
CCDC60-203ENST00000536742 MAP3K9P80192 1104 aa13.03□□□□□ -0.32
CCDC60-203ENST00000536742 IFT140Q96RY7 1462 aa13.02□□□□□ -0.33
CCDC60-203ENST00000536742 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.33
CCDC60-203ENST00000536742 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC60-203ENST00000536742 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
CCDC60-203ENST00000536742 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
CCDC60-203ENST00000536742 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
CCDC60-203ENST00000536742 ARHGAP33O14559 1287 aa12.98□□□□□ -0.33
CCDC60-203ENST00000536742 EVI5O60447 810 aa12.98□□□□□ -0.33
CCDC60-203ENST00000536742 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
CCDC60-203ENST00000536742 PTGER2P43116 358 aa12.97□□□□□ -0.33
CCDC60-203ENST00000536742 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
CCDC60-203ENST00000536742 ZNF454Q8N9F8 522 aa12.96□□□□□ -0.33
CCDC60-203ENST00000536742 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
CCDC60-203ENST00000536742 HECW2Q9P2P5 1572 aa12.94□□□□□ -0.34
CCDC60-203ENST00000536742 POTEEQ6S8J3 1075 aa12.94□□□□□ -0.34
CCDC60-203ENST00000536742 PDIA6Q15084 440 aa12.93□□□□□ -0.34
CCDC60-203ENST00000536742 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
CCDC60-203ENST00000536742 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
CCDC60-203ENST00000536742 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
CCDC60-203ENST00000536742 EIF4G3O43432 1585 aaKnown RBP12.92□□□□□ -0.34
CCDC60-203ENST00000536742 TESPA1A2RU30 521 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-203ENST00000536742 DPYSL4O14531 572 aa12.91□□□□□ -0.34
CCDC60-203ENST00000536742 RNF166Q96A37 237 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-203ENST00000536742 KCNK17Q96T54 332 aa12.9□□□□□ -0.34
CCDC60-203ENST00000536742 PSEN2P49810 448 aa12.89□□□□□ -0.35
CCDC60-203ENST00000536742 FOSBP53539 338 aa12.89□□□□□ -0.35
CCDC60-203ENST00000536742 JPH4Q96JJ6 628 aa12.88□□□□□ -0.35
CCDC60-203ENST00000536742 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
CCDC60-203ENST00000536742 GAPVD1Q14C86 1478 aa12.87□□□□□ -0.35
CCDC60-203ENST00000536742 CFTRP13569 1480 aa12.86□□□□□ -0.35
CCDC60-203ENST00000536742 SEMA3EO15041 775 aa12.86□□□□□ -0.35
CCDC60-203ENST00000536742 ADGRD1Q6QNK2 874 aa12.86□□□□□ -0.35
CCDC60-203ENST00000536742 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
CCDC60-203ENST00000536742 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
CCDC60-203ENST00000536742 BCL2L12Q9HB09 334 aa12.85□□□□□ -0.35
CCDC60-203ENST00000536742 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
CCDC60-203ENST00000536742 DISP3Q9P2K9 1392 aa12.84□□□□□ -0.35
CCDC60-203ENST00000536742 TK2O00142 265 aa12.84□□□□□ -0.35
CCDC60-203ENST00000536742 PTPREP23469 700 aa12.84□□□□□ -0.35
CCDC60-203ENST00000536742 ZDHHC16Q969W1 377 aa12.84□□□□□ -0.35
CCDC60-203ENST00000536742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC60-203ENST00000536742 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
CCDC60-203ENST00000536742 SYNJ2O15056 1496 aa12.81□□□□□ -0.36
CCDC60-203ENST00000536742 AQRO60306 1485 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC60-203ENST00000536742 LMOD2Q6P5Q4 547 aa12.78□□□□□ -0.36
CCDC60-203ENST00000536742 FBXW7Q969H0 707 aa12.78□□□□□ -0.36
CCDC60-203ENST00000536742 ADAM33Q9BZ11 813 aa12.78□□□□□ -0.36
CCDC60-203ENST00000536742 KDM6BO15054 1643 aa12.77□□□□□ -0.36
CCDC60-203ENST00000536742 PHF14O94880 888 aa12.77□□□□□ -0.37
CCDC60-203ENST00000536742 TYW1BQ6NUM6 668 aa12.77□□□□□ -0.37
CCDC60-203ENST00000536742 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
CCDC60-203ENST00000536742 MROH2BQ7Z745 1585 aa12.77□□□□□ -0.37
CCDC60-203ENST00000536742 ADGRL1O94910 1474 aa12.76□□□□□ -0.37
CCDC60-203ENST00000536742 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
CCDC60-203ENST00000536742 EPAS1Q99814 870 aa12.74□□□□□ -0.37
CCDC60-203ENST00000536742 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
CCDC60-203ENST00000536742 HRO43593 1189 aa12.73□□□□□ -0.37
CCDC60-203ENST00000536742 TPRNQ4KMQ1 711 aa12.73□□□□□ -0.37
CCDC60-203ENST00000536742 SLC4A5Q9BY07 1137 aa12.73□□□□□ -0.37
CCDC60-203ENST00000536742 MLLT3P42568 568 aaPredicted RBP12.72□□□□□ -0.37
CCDC60-203ENST00000536742 FAM69CQ0P6D2 419 aa12.71□□□□□ -0.37
CCDC60-203ENST00000536742 DDX12PQ92771 950 aa12.71□□□□□ -0.37
CCDC60-203ENST00000536742 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
CCDC60-203ENST00000536742 TOPBP1Q92547 1522 aa12.7□□□□□ -0.38
CCDC60-203ENST00000536742 ZBED2Q9BTP6 218 aa12.68□□□□□ -0.38
CCDC60-203ENST00000536742 TARBP1Q13395 1621 aaKnown RBP12.67□□□□□ -0.38
CCDC60-203ENST00000536742 PPP1R3GB7ZBB8 358 aa12.67□□□□□ -0.38
CCDC60-203ENST00000536742 RBM33Q96EV2 1170 aaKnown RBP12.67□□□□□ -0.38
CCDC60-203ENST00000536742 GRXCR2A6NFK2 248 aa12.66□□□□□ -0.38
CCDC60-203ENST00000536742 ABCC10Q5T3U5 1492 aa12.65□□□□□ -0.38
CCDC60-203ENST00000536742 GOLGA8CPA6NN73 597 aa12.65□□□□□ -0.38
CCDC60-203ENST00000536742 HCSTQ9UBK5 93 aa12.65□□□□□ -0.38
CCDC60-203ENST00000536742 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
CCDC60-203ENST00000536742 KCTD12Q96CX2 325 aaKnown RBP12.64□□□□□ -0.39
CCDC60-203ENST00000536742 OSBPP22059 807 aa12.63□□□□□ -0.39
CCDC60-203ENST00000536742 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
CCDC60-203ENST00000536742 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms