RNA–Protein interactions for RNA: ENST00000534724.1

PHF21A-220, Transcript of PHD finger protein 21A, humanhuman

TSL 5

Gene PHF21A, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF21A-220ENST00000534724 TOP2BQ02880 1626 aa9.3□□□□□ -0.92
PHF21A-220ENST00000534724 BIVM-ERCC5R4GMW8 1640 aa9.29□□□□□ -0.92
PHF21A-220ENST00000534724 PSDA5PKW4 1024 aaPredicted RBP9.28□□□□□ -0.92
PHF21A-220ENST00000534724 LHX6Q9UPM6 363 aa9.28□□□□□ -0.92
PHF21A-220ENST00000534724 SYNJ1O43426 1573 aa9.28□□□□□ -0.92
PHF21A-220ENST00000534724 CUX1P39880 1505 aa9.27□□□□□ -0.93
PHF21A-220ENST00000534724 KIF21AQ7Z4S6 1674 aa9.27□□□□□ -0.93
PHF21A-220ENST00000534724 ANO8Q9HCE9 1232 aaPredicted RBP9.27□□□□□ -0.93
PHF21A-220ENST00000534724 DNMBPQ6XZF7 1577 aa9.26□□□□□ -0.93
PHF21A-220ENST00000534724 FAM205CA6NFA0 338 aa9.26□□□□□ -0.93
PHF21A-220ENST00000534724 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
PHF21A-220ENST00000534724 KDM4FA0A1W2PPD8 638 aa9.25□□□□□ -0.93
PHF21A-220ENST00000534724 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
PHF21A-220ENST00000534724 MRC2Q9UBG0 1479 aa9.24□□□□□ -0.93
PHF21A-220ENST00000534724 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
PHF21A-220ENST00000534724 TULP1O00294 542 aaPredicted RBP9.24□□□□□ -0.93
PHF21A-220ENST00000534724 PPP4R3BQ5MIZ7 849 aa9.24□□□□□ -0.93
PHF21A-220ENST00000534724 VARS2Q5ST30 1063 aaKnown RBP9.24□□□□□ -0.93
PHF21A-220ENST00000534724 DDX12PQ92771 950 aa9.24□□□□□ -0.93
PHF21A-220ENST00000534724 URB2Q14146 1524 aaKnown RBP9.24□□□□□ -0.93
PHF21A-220ENST00000534724 TOPBP1Q92547 1522 aa9.24□□□□□ -0.93
PHF21A-220ENST00000534724 SEMA3EO15041 775 aa9.23□□□□□ -0.93
PHF21A-220ENST00000534724 PTGER2P43116 358 aa9.23□□□□□ -0.93
PHF21A-220ENST00000534724 SMYD5Q6GMV2 418 aa9.23□□□□□ -0.93
PHF21A-220ENST00000534724 JPH4Q96JJ6 628 aa9.23□□□□□ -0.93
PHF21A-220ENST00000534724 PHF14O94880 888 aa9.22□□□□□ -0.93
PHF21A-220ENST00000534724 HS3ST6Q96QI5 342 aa9.21□□□□□ -0.94
PHF21A-220ENST00000534724 EPAS1Q99814 870 aa9.21□□□□□ -0.94
PHF21A-220ENST00000534724 ERCC6Q03468 1493 aa9.21□□□□□ -0.94
PHF21A-220ENST00000534724 WDR62O43379 1518 aa9.21□□□□□ -0.94
PHF21A-220ENST00000534724 FOSBP53539 338 aa9.2□□□□□ -0.94
PHF21A-220ENST00000534724 TYW1BQ6NUM6 668 aa9.2□□□□□ -0.94
PHF21A-220ENST00000534724 BCANQ96GW7 911 aa9.2□□□□□ -0.94
PHF21A-220ENST00000534724 EEA1Q15075 1411 aa9.2□□□□□ -0.94
PHF21A-220ENST00000534724 FGD5Q6ZNL6 1462 aa9.2□□□□□ -0.94
PHF21A-220ENST00000534724 FBXW7Q969H0 707 aa9.19□□□□□ -0.94
PHF21A-220ENST00000534724 ZDHHC16Q969W1 377 aa9.19□□□□□ -0.94
PHF21A-220ENST00000534724 KCNH8Q96L42 1107 aa9.19□□□□□ -0.94
PHF21A-220ENST00000534724 POLA1P09884 1462 aaPredicted RBP9.19□□□□□ -0.94
PHF21A-220ENST00000534724 THOC2Q8NI27 1593 aaKnown RBP9.18□□□□□ -0.94
PHF21A-220ENST00000534724 PCDHGA10Q9Y5H3 936 aa9.18□□□□□ -0.94
PHF21A-220ENST00000534724 TESPA1A2RU30 521 aaPredicted RBP9.17□□□□□ -0.94
PHF21A-220ENST00000534724 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
PHF21A-220ENST00000534724 ZNF687Q8N1G0 1237 aa9.16□□□□□ -0.94
PHF21A-220ENST00000534724 RBM33Q96EV2 1170 aaKnown RBP9.16□□□□□ -0.94
PHF21A-220ENST00000534724 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.94
PHF21A-220ENST00000534724 SOGA1O94964 1423 aa9.15□□□□□ -0.94
PHF21A-220ENST00000534724 MAP3K7O43318 606 aa9.15□□□□□ -0.94
PHF21A-220ENST00000534724 CUX2O14529 1486 aa9.14□□□□□ -0.95
PHF21A-220ENST00000534724 KIF27Q86VH2 1401 aa9.14□□□□□ -0.95
PHF21A-220ENST00000534724 PTPREP23469 700 aa9.13□□□□□ -0.95
PHF21A-220ENST00000534724 TARBP1Q13395 1621 aaKnown RBP9.13□□□□□ -0.95
PHF21A-220ENST00000534724 POTEB3A0JP26 581 aa9.12□□□□□ -0.95
PHF21A-220ENST00000534724 OSBPP22059 807 aa9.12□□□□□ -0.95
PHF21A-220ENST00000534724 PBX2P40425 430 aa9.12□□□□□ -0.95
PHF21A-220ENST00000534724 EN1Q05925 392 aaPredicted RBP9.12□□□□□ -0.95
PHF21A-220ENST00000534724 POTEBQ6S5H4 581 aa9.12□□□□□ -0.95
PHF21A-220ENST00000534724 ADAM33Q9BZ11 813 aa9.12□□□□□ -0.95
PHF21A-220ENST00000534724 BCL2L12Q9HB09 334 aa9.12□□□□□ -0.95
PHF21A-220ENST00000534724 IFT140Q96RY7 1462 aa9.12□□□□□ -0.95
PHF21A-220ENST00000534724 RAD54L2Q9Y4B4 1467 aa9.11□□□□□ -0.95
PHF21A-220ENST00000534724 WDR97A6NE52 1622 aa9.11□□□□□ -0.95
PHF21A-220ENST00000534724 RUSC2Q8N2Y8 1516 aa9.1□□□□□ -0.95
PHF21A-220ENST00000534724 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
PHF21A-220ENST00000534724 CDAN1Q8IWY9 1227 aa9.1□□□□□ -0.95
PHF21A-220ENST00000534724 KCNK17Q96T54 332 aa9.1□□□□□ -0.95
PHF21A-220ENST00000534724 C6orf132Q5T0Z8 1188 aa9.09□□□□□ -0.95
PHF21A-220ENST00000534724 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
PHF21A-220ENST00000534724 AXIN2Q9Y2T1 843 aa9.08□□□□□ -0.96
PHF21A-220ENST00000534724 IGF1RP08069 1367 aa9.08□□□□□ -0.96
PHF21A-220ENST00000534724 ABCA5Q8WWZ7 1642 aa9.07□□□□□ -0.96
PHF21A-220ENST00000534724 PSEN2P49810 448 aa9.06□□□□□ -0.96
PHF21A-220ENST00000534724 TSR1Q2NL82 804 aaKnown RBP9.06□□□□□ -0.96
PHF21A-220ENST00000534724 RBM26Q5T8P6 1007 aaKnown RBP9.06□□□□□ -0.96
PHF21A-220ENST00000534724 PRXQ9BXM0 1461 aa9.06□□□□□ -0.96
PHF21A-220ENST00000534724 ERICH3Q5RHP9 1530 aa9.05□□□□□ -0.96
PHF21A-220ENST00000534724 GAPVD1Q14C86 1478 aa9.05□□□□□ -0.96
PHF21A-220ENST00000534724 FAM9AQ8IZU1 332 aaPredicted RBP9.05□□□□□ -0.96
PHF21A-220ENST00000534724 CERKQ8TCT0 537 aa9.05□□□□□ -0.96
PHF21A-220ENST00000534724 TDRD9Q8NDG6 1382 aaKnown RBP9.04□□□□□ -0.96
PHF21A-220ENST00000534724 PPP1R3GB7ZBB8 358 aa9.04□□□□□ -0.96
PHF21A-220ENST00000534724 PRIM1P49642 420 aaKnown RBP9.04□□□□□ -0.96
PHF21A-220ENST00000534724 LMOD2Q6P5Q4 547 aa9.04□□□□□ -0.96
PHF21A-220ENST00000534724 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
PHF21A-220ENST00000534724 KIF21BO75037 1637 aa9.04□□□□□ -0.96
PHF21A-220ENST00000534724 ANKRD13DQ6ZTN6 518 aa9.03□□□□□ -0.96
PHF21A-220ENST00000534724 GPIHBP1Q8IV16 184 aa9.03□□□□□ -0.96
PHF21A-220ENST00000534724 LSM11P83369 360 aaKnown RBP eCLIP9.02□□□□□ -0.97
PHF21A-220ENST00000534724 POTEEQ6S8J3 1075 aa9.02□□□□□ -0.97
PHF21A-220ENST00000534724 CDHR5Q9HBB8 845 aa9.02□□□□□ -0.97
PHF21A-220ENST00000534724 GRIN2BQ13224 1484 aa9.02□□□□□ -0.97
PHF21A-220ENST00000534724 CARMIL1Q5VZK9 1371 aa9.01□□□□□ -0.97
PHF21A-220ENST00000534724 ZNF608Q9ULD9 1512 aaPredicted RBP9.01□□□□□ -0.97
PHF21A-220ENST00000534724 FCHSD2O94868 740 aa9.01□□□□□ -0.97
PHF21A-220ENST00000534724 AQRO60306 1485 aaKnown RBP eCLIP9.01□□□□□ -0.97
PHF21A-220ENST00000534724 CUL7Q14999 1698 aa9□□□□□ -0.97
PHF21A-220ENST00000534724 LOC105371045A0A1W2PR82 267 aa9□□□□□ -0.97
PHF21A-220ENST00000534724 COL9A1P20849 921 aa9□□□□□ -0.97
PHF21A-220ENST00000534724 DMRTA1Q5VZB9 504 aa9□□□□□ -0.97
PHF21A-220ENST00000534724 GOLGA3Q08378 1498 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms